gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 224 |
| AclWI | GGATC | 2 cut(s) | 23, 215 |
| AcsI | RAATTY | 2 cut(s) | 39, 81 |
| AfaI | GTAC | 1 cut(s) | 206 |
| AgsI | TTSAA | 1 cut(s) | 38 |
| AluBI | AGCT | 2 cut(s) | 63, 232 |
| AluI | AGCT | 2 cut(s) | 63, 232 |
| Alw21I | GWGCWC | 1 cut(s) | 292 |
| AlwI | GGATC | 2 cut(s) | 23, 215 |
| ApoI | RAATTY | 2 cut(s) | 39, 81 |
| AsuHPI | GGTGA | 1 cut(s) | 254 |
| Bbv12I | GWGCWC | 1 cut(s) | 292 |
| BccI | CCATC | 1 cut(s) | 122 |
| BfaI | CTAG | 1 cut(s) | 285 |
| BfmI | CTRYAG | 1 cut(s) | 69 |
| BmsI | GCATC | 2 cut(s) | 16, 100 |
| BoxI | GACNNNNGTC | 1 cut(s) | 189 |
| BpuEI | CTTGAG | 2 cut(s) | 190, 248 |
| Bsa29I | ATCGAT | 1 cut(s) | 253 |
| BsaJI | CCNNGG | 1 cut(s) | 153 |
| BseCI | ATCGAT | 1 cut(s) | 253 |
| BseDI | CCNNGG | 1 cut(s) | 153 |
| BseYI | CCCAGC | 1 cut(s) | 63 |
| BshVI | ATCGAT | 1 cut(s) | 253 |
| BsiHKAI | GWGCWC | 1 cut(s) | 292 |
| Bsp1286I | GDGCHC | 1 cut(s) | 292 |
| Bsp143I | GATC | 3 cut(s) | 28, 145, 220 |
| BspACI | CCGC | 1 cut(s) | 224 |
| BspDI | ATCGAT | 1 cut(s) | 253 |
| BspPI | GGATC | 2 cut(s) | 23, 215 |
| BssECI | CCNNGG | 1 cut(s) | 153 |
| BssMI | GATC | 3 cut(s) | 28, 145, 220 |
| BssT1I | CCWWGG | 1 cut(s) | 153 |
| BstC8I | GCNNGC | 1 cut(s) | 240 |
| BstDEI | CTNAG | 1 cut(s) | 104 |
| BstKTI | GATC | 3 cut(s) | 31, 148, 223 |
| BstMBI | GATC | 3 cut(s) | 28, 145, 220 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 189 |
| BstSFI | CTRYAG | 1 cut(s) | 69 |
| BstX2I | RGATCY | 1 cut(s) | 220 |
| BstYI | RGATCY | 1 cut(s) | 220 |
| Bsu15I | ATCGAT | 1 cut(s) | 253 |
| BsuTUI | ATCGAT | 1 cut(s) | 253 |
| Cac8I | GCNNGC | 1 cut(s) | 240 |
| ClaI | ATCGAT | 1 cut(s) | 253 |
| Csp6I | GTAC | 1 cut(s) | 205 |
| CviJI | RGCY | 6 cut(s) | 63, 68, 95, 158, 232, 248 |
| CviKI_1 | RGCY | 6 cut(s) | 63, 68, 95, 158, 232, 248 |
| CviQI | GTAC | 1 cut(s) | 205 |
| DdeI | CTNAG | 1 cut(s) | 104 |
| DpnI | GATC | 3 cut(s) | 30, 147, 222 |
| DpnII | GATC | 3 cut(s) | 28, 145, 220 |
| Eco130I | CCWWGG | 1 cut(s) | 153 |
| EcoT14I | CCWWGG | 1 cut(s) | 153 |
| EcoT22I | ATGCAT | 1 cut(s) | 9 |
| ErhI | CCWWGG | 1 cut(s) | 153 |
| FaiI | YATR | 3 cut(s) | 92, 140, 161 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 8, 40, 210, 242 |
| FspBI | CTAG | 1 cut(s) | 285 |
| GsaI | CCCAGC | 1 cut(s) | 67 |
| HincII | GTYRAC | 1 cut(s) | 124 |
| HindII | GTYRAC | 1 cut(s) | 124 |
| HinfI | GANTC | 2 cut(s) | 172, 190 |
| HpaI | GTTAAC | 1 cut(s) | 124 |
| HphI | GGTGA | 1 cut(s) | 254 |
| Hpy166II | GTNNAC | 1 cut(s) | 124 |
| Hpy188I | TCNGA | 1 cut(s) | 12 |
| Hpy188III | TCNNGA | 3 cut(s) | 35, 169, 182 |
| Hpy8I | GTNNAC | 1 cut(s) | 124 |
| HpyCH4V | TGCA | 1 cut(s) | 7 |
| HpyF3I | CTNAG | 1 cut(s) | 104 |
| KspAI | GTTAAC | 1 cut(s) | 124 |
| Kzo9I | GATC | 3 cut(s) | 28, 145, 220 |
| LpnPI | CCDG | 3 cut(s) | 30, 49, 278 |
| LweI | GCATC | 2 cut(s) | 16, 100 |
| MaeI | CTAG | 1 cut(s) | 285 |
| MalI | GATC | 3 cut(s) | 30, 147, 222 |
| MboI | GATC | 3 cut(s) | 28, 145, 220 |
| MflI | RGATCY | 1 cut(s) | 220 |
| MhlI | GDGCHC | 1 cut(s) | 292 |
| MluCI | AATT | 2 cut(s) | 39, 81 |
| MlyI | GAGTC | 2 cut(s) | 181, 199 |
| MnlI | CCTC | 1 cut(s) | 42 |
| Mph1103I | ATGCAT | 1 cut(s) | 9 |
| MseI | TTAA | 1 cut(s) | 123 |
| NdeII | GATC | 3 cut(s) | 28, 145, 220 |
| NsiI | ATGCAT | 1 cut(s) | 9 |
| PleI | GAGTC | 2 cut(s) | 180, 198 |
| PpsI | GAGTC | 2 cut(s) | 180, 198 |
| PshAI | GACNNNNGTC | 1 cut(s) | 189 |
| PspFI | CCCAGC | 1 cut(s) | 63 |
| PsuI | RGATCY | 1 cut(s) | 220 |
| RsaI | GTAC | 1 cut(s) | 206 |
| RsaNI | GTAC | 1 cut(s) | 205 |
| SaqAI | TTAA | 1 cut(s) | 123 |
| Sau3AI | GATC | 3 cut(s) | 28, 145, 220 |
| SchI | GAGTC | 2 cut(s) | 181, 199 |
| SduI | GDGCHC | 1 cut(s) | 292 |
| SetI | ASST | 5 cut(s) | 65, 105, 210, 234, 286 |
| SfaNI | GCATC | 2 cut(s) | 16, 100 |
| SfcI | CTRYAG | 1 cut(s) | 69 |
| SmlI | CTYRAG | 2 cut(s) | 169, 227 |
| SmoI | CTYRAG | 2 cut(s) | 169, 227 |
| Sse9I | AATT | 2 cut(s) | 39, 81 |
| SsiI | CCGC | 1 cut(s) | 224 |
| SspMI | CTAG | 1 cut(s) | 285 |
| StyI | CCWWGG | 1 cut(s) | 153 |
| TaqI | TCGA | 2 cut(s) | 78, 253 |
| TasI | AATT | 2 cut(s) | 39, 81 |
| Tru1I | TTAA | 1 cut(s) | 123 |
| Tru9I | TTAA | 1 cut(s) | 123 |
| XapI | RAATTY | 2 cut(s) | 39, 81 |
| XspI | CTAG | 1 cut(s) | 285 |
| Zsp2I | ATGCAT | 1 cut(s) | 9 |