No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 673 |
| Acc36I | ACCTGC | 1 cut(s) | 673 |
| Acc65I | GGTACC | 1 cut(s) | 335 |
| AccB1I | GGYRCC | 1 cut(s) | 335 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 541 |
| AccII | CGCG | 2 cut(s) | 381, 393 |
| AciI | CCGC | 1 cut(s) | 391 |
| AcuI | CTGAAG | 3 cut(s) | 57, 132, 378 |
| AcvI | CACGTG | 1 cut(s) | 538 |
| AdeI | CACNNNGTG | 1 cut(s) | 541 |
| AfaI | GTAC | 1 cut(s) | 337 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 446, 470, 541 |
| AgeI | ACCGGT | 1 cut(s) | 332 |
| AgsI | TTSAA | 2 cut(s) | 157, 226 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 124, 654 |
| AjiI | CACGTC | 1 cut(s) | 524 |
| AjnI | CCWGG | 1 cut(s) | 557 |
| AluBI | AGCT | 1 cut(s) | 571 |
| AluI | AGCT | 1 cut(s) | 571 |
| Alw26I | GTCTC | 2 cut(s) | 436, 635 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 665 |
| AoxI | GGCC | 4 cut(s) | 326, 428, 461, 472 |
| ApaI | GGGCCC | 1 cut(s) | 465 |
| AseI | ATTAAT | 1 cut(s) | 15 |
| AsiGI | ACCGGT | 1 cut(s) | 332 |
| Asp718I | GGTACC | 1 cut(s) | 335 |
| AspLEI | GCGC | 1 cut(s) | 395 |
| AspS9I | GGNCC | 9 cut(s) | 118, 168, 327, 461, 462, 473, 561, 592, 656 |
| AsuHPI | GGTGA | 1 cut(s) | 259 |
| AvaII | GGWCC | 5 cut(s) | 118, 168, 561, 592, 656 |
| BaeGI | GKGCMC | 1 cut(s) | 465 |
| BanI | GGYRCC | 1 cut(s) | 335 |
| BanII | GRGCYC | 1 cut(s) | 465 |
| BbrPI | CACGTG | 1 cut(s) | 538 |
| BccI | CCATC | 3 cut(s) | 168, 384, 608 |
| BceAI | ACGGC | 1 cut(s) | 653 |
| BciT130I | CCWGG | 1 cut(s) | 559 |
| BclI | TGATCA | 1 cut(s) | 316 |
| BcoDI | GTCTC | 2 cut(s) | 436, 635 |
| BfaI | CTAG | 2 cut(s) | 143, 249 |
| BfuAI | ACCTGC | 1 cut(s) | 673 |
| Bme1390I | CCNGG | 1 cut(s) | 559 |
| Bme18I | GGWCC | 5 cut(s) | 118, 168, 561, 592, 656 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 124, 654 |
| BmgBI | CACGTC | 1 cut(s) | 524 |
| BmgT120I | GGNCC | 9 cut(s) | 118, 168, 327, 461, 462, 473, 561, 592, 656 |
| BmiI | GGNNCC | 3 cut(s) | 120, 337, 463 |
| BmrFI | CCNGG | 1 cut(s) | 559 |
| BsaAI | YACGTR | 1 cut(s) | 538 |
| BsaBI | GATNNNNATC | 1 cut(s) | 65 |
| BsaJI | CCNNGG | 4 cut(s) | 406, 493, 506, 557 |
| BsaWI | WCCGGW | 1 cut(s) | 332 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 446, 470, 541 |
| Bse118I | RCCGGY | 1 cut(s) | 332 |
| Bse1I | ACTGG | 1 cut(s) | 203 |
| Bse8I | GATNNNNATC | 1 cut(s) | 65 |
| BseBI | CCWGG | 1 cut(s) | 559 |
| BseDI | CCNNGG | 4 cut(s) | 406, 493, 506, 557 |
| BseGI | GGATG | 1 cut(s) | 603 |
| BseJI | GATNNNNATC | 1 cut(s) | 65 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 446, 470, 541 |
| BseMII | CTCAG | 1 cut(s) | 270 |
| BseNI | ACTGG | 1 cut(s) | 203 |
| BseRI | GAGGAG | 1 cut(s) | 531 |
| BseSI | GKGCMC | 1 cut(s) | 465 |
| Bsh1236I | CGCG | 2 cut(s) | 381, 393 |
| BshFI | GGCC | 4 cut(s) | 328, 430, 463, 474 |
| BshNI | GGYRCC | 1 cut(s) | 335 |
| BshTI | ACCGGT | 1 cut(s) | 332 |
| BsiSI | CCGG | 1 cut(s) | 333 |
| BslFI | GGGAC | 1 cut(s) | 112 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 446, 470, 541 |
| BsmAI | GTCTC | 2 cut(s) | 436, 635 |
| BsmFI | GGGAC | 1 cut(s) | 112 |
| BsnI | GGCC | 4 cut(s) | 328, 430, 463, 474 |
| Bsp120I | GGGCCC | 1 cut(s) | 461 |
| Bsp1286I | GDGCHC | 1 cut(s) | 465 |
| Bsp143I | GATC | 2 cut(s) | 5, 316 |
| Bsp68I | TCGCGA | 1 cut(s) | 381 |
| BspACI | CCGC | 1 cut(s) | 391 |
| BspANI | GGCC | 4 cut(s) | 328, 430, 463, 474 |
| BspCNI | CTCAG | 1 cut(s) | 269 |
| BspFNI | CGCG | 2 cut(s) | 381, 393 |
| BspLI | GGNNCC | 3 cut(s) | 120, 337, 463 |
| BspMI | ACCTGC | 1 cut(s) | 673 |
| BspQI | GCTCTTC | 1 cut(s) | 141 |
| BspT107I | GGYRCC | 1 cut(s) | 335 |
| BsrFI | RCCGGY | 1 cut(s) | 332 |
| BsrI | ACTGG | 1 cut(s) | 203 |
| BssAI | RCCGGY | 1 cut(s) | 332 |
| BssECI | CCNNGG | 4 cut(s) | 406, 493, 506, 557 |
| BssMI | GATC | 2 cut(s) | 5, 316 |
| BssT1I | CCWWGG | 2 cut(s) | 493, 506 |
| Bst2UI | CCWGG | 1 cut(s) | 559 |
| Bst4CI | ACNGT | 4 cut(s) | 126, 232, 271, 485 |
| Bst6I | CTCTTC | 2 cut(s) | 108, 141 |
| BstBAI | YACGTR | 1 cut(s) | 538 |
| BstC8I | GCNNGC | 1 cut(s) | 282 |
| BstDEI | CTNAG | 2 cut(s) | 256, 608 |
| BstEII | GGTNACC | 1 cut(s) | 265 |
| BstF5I | GGATG | 1 cut(s) | 603 |
| BstFNI | CGCG | 2 cut(s) | 381, 393 |
| BstHHI | GCGC | 1 cut(s) | 395 |
| BstKTI | GATC | 2 cut(s) | 8, 319 |
| BstMAI | GTCTC | 2 cut(s) | 436, 635 |
| BstMBI | GATC | 2 cut(s) | 5, 316 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 199 |
| BstNI | CCWGG | 1 cut(s) | 559 |
| BstPI | GGTNACC | 1 cut(s) | 265 |
| BstSCI | CCNGG | 1 cut(s) | 557 |
| BstSLI | GKGCMC | 1 cut(s) | 465 |
| BstUI | CGCG | 2 cut(s) | 381, 393 |
| BsuRI | GGCC | 4 cut(s) | 328, 430, 463, 474 |
| BtgZI | GCGATG | 2 cut(s) | 13, 362 |
| BtrI | CACGTC | 1 cut(s) | 524 |
| BtsCI | GGATG | 1 cut(s) | 603 |
| BtsIMutI | CAGTG | 2 cut(s) | 122, 644 |
| BtuMI | TCGCGA | 1 cut(s) | 381 |
| BveI | ACCTGC | 1 cut(s) | 673 |
| Cac8I | GCNNGC | 1 cut(s) | 282 |
| CaiI | CAGNNNCTG | 1 cut(s) | 665 |
| CfoI | GCGC | 1 cut(s) | 395 |
| Cfr10I | RCCGGY | 1 cut(s) | 332 |
| Cfr13I | GGNCC | 9 cut(s) | 118, 168, 327, 461, 462, 473, 561, 592, 656 |
| Csp6I | GTAC | 1 cut(s) | 336 |
| CspAI | ACCGGT | 1 cut(s) | 332 |
| CviAII | CATG | 1 cut(s) | 446 |
| CviJI | RGCY | 7 cut(s) | 56, 328, 430, 463, 474, 533, 571 |
| CviKI_1 | RGCY | 7 cut(s) | 56, 328, 430, 463, 474, 533, 571 |
| CviQI | GTAC | 1 cut(s) | 336 |
| DdeI | CTNAG | 2 cut(s) | 256, 608 |
| DpnI | GATC | 2 cut(s) | 7, 318 |
| DpnII | GATC | 2 cut(s) | 5, 316 |
| DraIII | CACNNNGTG | 1 cut(s) | 541 |
| DriI | GACNNNNNGTC | 2 cut(s) | 124, 654 |
| Eam1104I | CTCTTC | 2 cut(s) | 108, 141 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 124, 654 |
| EarI | CTCTTC | 2 cut(s) | 108, 141 |
| Eco130I | CCWWGG | 2 cut(s) | 493, 506 |
| Eco147I | AGGCCT | 1 cut(s) | 430 |
| Eco24I | GRGCYC | 1 cut(s) | 465 |
| Eco47I | GGWCC | 5 cut(s) | 118, 168, 561, 592, 656 |
| Eco57I | CTGAAG | 3 cut(s) | 57, 132, 378 |
| Eco72I | CACGTG | 1 cut(s) | 538 |
| Eco91I | GGTNACC | 1 cut(s) | 265 |
| EcoO109I | RGGNCCY | 1 cut(s) | 118 |
| EcoO65I | GGTNACC | 1 cut(s) | 265 |
| EcoRII | CCWGG | 1 cut(s) | 557 |
| EcoT14I | CCWWGG | 2 cut(s) | 493, 506 |
| EcoT38I | GRGCYC | 1 cut(s) | 465 |
| ErhI | CCWWGG | 2 cut(s) | 493, 506 |
| FaeI | CATG | 1 cut(s) | 449 |
| FaqI | GGGAC | 1 cut(s) | 112 |
| FatI | CATG | 1 cut(s) | 445 |
| FauNDI | CATATG | 1 cut(s) | 478 |
| FbaI | TGATCA | 1 cut(s) | 316 |
| FokI | GGATG | 1 cut(s) | 590 |
| FriOI | GRGCYC | 1 cut(s) | 465 |
| FspBI | CTAG | 2 cut(s) | 143, 249 |
| GlaI | GCGC | 1 cut(s) | 394 |
| HaeIII | GGCC | 4 cut(s) | 328, 430, 463, 474 |
| HapII | CCGG | 1 cut(s) | 333 |
| HhaI | GCGC | 1 cut(s) | 395 |
| Hin1II | CATG | 1 cut(s) | 449 |
| Hin6I | GCGC | 1 cut(s) | 393 |
| HinP1I | GCGC | 1 cut(s) | 393 |
| HinfI | GANTC | 3 cut(s) | 153, 252, 612 |
| HpaII | CCGG | 1 cut(s) | 333 |
| HphI | GGTGA | 1 cut(s) | 259 |
| Hpy166II | GTNNAC | 1 cut(s) | 527 |
| Hpy188I | TCNGA | 4 cut(s) | 165, 259, 441, 596 |
| Hpy188III | TCNNGA | 5 cut(s) | 70, 143, 218, 226, 380 |
| Hpy8I | GTNNAC | 1 cut(s) | 527 |
| HpyAV | CCTTC | 4 cut(s) | 40, 411, 417, 444 |
| HpyCH4III | ACNGT | 4 cut(s) | 126, 232, 271, 485 |
| HpyCH4IV | ACGT | 4 cut(s) | 211, 436, 523, 537 |
| HpyCH4V | TGCA | 1 cut(s) | 673 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 199 |
| HpyF3I | CTNAG | 2 cut(s) | 256, 608 |
| HpySE526I | ACGT | 4 cut(s) | 211, 436, 523, 537 |
| Hsp92II | CATG | 1 cut(s) | 449 |
| HspAI | GCGC | 1 cut(s) | 393 |
| KpnI | GGTACC | 1 cut(s) | 339 |
| Ksp22I | TGATCA | 1 cut(s) | 316 |
| Kzo9I | GATC | 2 cut(s) | 5, 316 |
| LguI | GCTCTTC | 1 cut(s) | 141 |
| MaeI | CTAG | 2 cut(s) | 143, 249 |
| MaeII | ACGT | 4 cut(s) | 211, 436, 523, 537 |
| MaeIII | GTNAC | 2 cut(s) | 265, 485 |
| MalI | GATC | 2 cut(s) | 7, 318 |
| MboI | GATC | 2 cut(s) | 5, 316 |
| MboII | GAAGA | 3 cut(s) | 50, 125, 158 |
| MhlI | GDGCHC | 1 cut(s) | 465 |
| MluCI | AATT | 2 cut(s) | 12, 575 |
| MmeI | TCCRAC | 2 cut(s) | 588, 619 |
| MnlI | CCTC | 8 cut(s) | 76, 109, 159, 303, 401, 420, 509, 512 |
| MseI | TTAA | 2 cut(s) | 15, 107 |
| MspI | CCGG | 1 cut(s) | 333 |
| MspR9I | CCNGG | 1 cut(s) | 559 |
| MvaI | CCWGG | 1 cut(s) | 559 |
| MvnI | CGCG | 2 cut(s) | 381, 393 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 199 |
| NdeI | CATATG | 1 cut(s) | 478 |
| NdeII | GATC | 2 cut(s) | 5, 316 |
| NlaIII | CATG | 1 cut(s) | 449 |
| NlaIV | GGNNCC | 3 cut(s) | 120, 337, 463 |
| NmuCI | GTSAC | 2 cut(s) | 265, 485 |
| NruI | TCGCGA | 1 cut(s) | 381 |
| PaqCI | CACCTGC | 1 cut(s) | 673 |
| PceI | AGGCCT | 1 cut(s) | 430 |
| PciSI | GCTCTTC | 1 cut(s) | 141 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 520 |
| PfeI | GAWTC | 3 cut(s) | 153, 252, 612 |
| PflFI | GACNNNGTC | 1 cut(s) | 263 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 541 |
| PinAI | ACCGGT | 1 cut(s) | 332 |
| PmaCI | CACGTG | 1 cut(s) | 538 |
| PmlI | CACGTG | 1 cut(s) | 538 |
| Ppu21I | YACGTR | 1 cut(s) | 538 |
| PpuMI | RGGWCCY | 1 cut(s) | 118 |
| PshBI | ATTAAT | 1 cut(s) | 15 |
| Psp5II | RGGWCCY | 1 cut(s) | 118 |
| Psp6I | CCWGG | 1 cut(s) | 557 |
| PspCI | CACGTG | 1 cut(s) | 538 |
| PspEI | GGTNACC | 1 cut(s) | 265 |
| PspGI | CCWGG | 1 cut(s) | 557 |
| PspN4I | GGNNCC | 3 cut(s) | 120, 337, 463 |
| PspOMI | GGGCCC | 1 cut(s) | 461 |
| PspPI | GGNCC | 9 cut(s) | 118, 168, 327, 461, 462, 473, 561, 592, 656 |
| PspPPI | RGGWCCY | 1 cut(s) | 118 |
| PstNI | CAGNNNCTG | 1 cut(s) | 665 |
| PsyI | GACNNNGTC | 1 cut(s) | 263 |
| RruI | TCGCGA | 1 cut(s) | 381 |
| RsaI | GTAC | 1 cut(s) | 337 |
| RsaNI | GTAC | 1 cut(s) | 336 |
| SapI | GCTCTTC | 1 cut(s) | 141 |
| SaqAI | TTAA | 2 cut(s) | 15, 107 |
| Sau3AI | GATC | 2 cut(s) | 5, 316 |
| Sau96I | GGNCC | 9 cut(s) | 118, 168, 327, 461, 462, 473, 561, 592, 656 |
| ScrFI | CCNGG | 1 cut(s) | 559 |
| SduI | GDGCHC | 1 cut(s) | 465 |
| SinI | GGWCC | 5 cut(s) | 118, 168, 561, 592, 656 |
| Sse9I | AATT | 2 cut(s) | 12, 575 |
| SseBI | AGGCCT | 1 cut(s) | 430 |
| SsiI | CCGC | 1 cut(s) | 391 |
| SspI | AATATT | 1 cut(s) | 104 |
| SspMI | CTAG | 2 cut(s) | 143, 249 |
| StuI | AGGCCT | 1 cut(s) | 430 |
| StyD4I | CCNGG | 1 cut(s) | 557 |
| StyI | CCWWGG | 2 cut(s) | 493, 506 |
| TaaI | ACNGT | 4 cut(s) | 126, 232, 271, 485 |
| TaiI | ACGT | 4 cut(s) | 214, 439, 526, 540 |
| TaqI | TCGA | 1 cut(s) | 514 |
| TasI | AATT | 2 cut(s) | 12, 575 |
| TfiI | GAWTC | 3 cut(s) | 153, 252, 612 |
| Tru1I | TTAA | 2 cut(s) | 15, 107 |
| Tru9I | TTAA | 2 cut(s) | 15, 107 |
| TscAI | CASTG | 2 cut(s) | 129, 651 |
| TseFI | GTSAC | 2 cut(s) | 265, 485 |
| Tsp45I | GTSAC | 2 cut(s) | 265, 485 |
| TspDTI | ATGAA | 3 cut(s) | 55, 59, 252 |
| TspRI | CASTG | 2 cut(s) | 129, 651 |
| Tth111I | GACNNNGTC | 1 cut(s) | 263 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 541 |
| VpaK11BI | GGWCC | 5 cut(s) | 118, 168, 561, 592, 656 |
| VspI | ATTAAT | 1 cut(s) | 15 |
| XbaI | TCTAGA | 1 cut(s) | 142 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 129 |
| XspI | CTAG | 2 cut(s) | 143, 249 |