zinc finger
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 498 |
| AccII | CGCG | 1 cut(s) | 307 |
| AclWI | GGATC | 3 cut(s) | 37, 345, 410 |
| AcoI | YGGCCR | 1 cut(s) | 115 |
| AcuI | CTGAAG | 1 cut(s) | 285 |
| AfaI | GTAC | 2 cut(s) | 310, 319 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 279 |
| AgeI | ACCGGT | 1 cut(s) | 501 |
| AgsI | TTSAA | 2 cut(s) | 208, 445 |
| AjiI | CACGTC | 1 cut(s) | 113 |
| AjnI | CCWGG | 2 cut(s) | 174, 390 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 65, 97 |
| AluBI | AGCT | 1 cut(s) | 236 |
| AluI | AGCT | 1 cut(s) | 236 |
| Alw26I | GTCTC | 1 cut(s) | 368 |
| AlwI | GGATC | 3 cut(s) | 37, 345, 410 |
| AoxI | GGCC | 2 cut(s) | 115, 196 |
| AsiGI | ACCGGT | 1 cut(s) | 501 |
| AspLEI | GCGC | 1 cut(s) | 307 |
| AspS9I | GGNCC | 2 cut(s) | 197, 504 |
| AsuHPI | GGTGA | 1 cut(s) | 104 |
| AvaII | GGWCC | 1 cut(s) | 504 |
| BalI | TGGCCA | 1 cut(s) | 117 |
| BccI | CCATC | 2 cut(s) | 18, 126 |
| BciT130I | CCWGG | 2 cut(s) | 176, 392 |
| BcoDI | GTCTC | 1 cut(s) | 368 |
| BfaI | CTAG | 4 cut(s) | 255, 332, 396, 458 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 228 |
| Bme1390I | CCNGG | 2 cut(s) | 176, 392 |
| Bme18I | GGWCC | 1 cut(s) | 504 |
| BmgBI | CACGTC | 1 cut(s) | 113 |
| BmgT120I | GGNCC | 2 cut(s) | 197, 504 |
| BmiI | GGNNCC | 2 cut(s) | 180, 271 |
| BmrFI | CCNGG | 2 cut(s) | 176, 392 |
| BpuEI | CTTGAG | 1 cut(s) | 341 |
| BsaBI | GATNNNNATC | 1 cut(s) | 342 |
| BsaI | GGTCTC | 1 cut(s) | 368 |
| BsaJI | CCNNGG | 2 cut(s) | 154, 182 |
| BsaWI | WCCGGW | 1 cut(s) | 501 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 29 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 279 |
| Bse118I | RCCGGY | 1 cut(s) | 501 |
| Bse1I | ACTGG | 2 cut(s) | 31, 419 |
| Bse3DI | GCAATG | 1 cut(s) | 298 |
| Bse8I | GATNNNNATC | 1 cut(s) | 342 |
| BseBI | CCWGG | 2 cut(s) | 176, 392 |
| BseDI | CCNNGG | 2 cut(s) | 154, 182 |
| BseGI | GGATG | 1 cut(s) | 80 |
| BseJI | GATNNNNATC | 1 cut(s) | 342 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 279 |
| BseMI | GCAATG | 1 cut(s) | 298 |
| BseNI | ACTGG | 2 cut(s) | 31, 419 |
| BsgI | GTGCAG | 1 cut(s) | 18 |
| Bsh1236I | CGCG | 1 cut(s) | 307 |
| BshFI | GGCC | 2 cut(s) | 117, 198 |
| BshTI | ACCGGT | 1 cut(s) | 501 |
| BsiSI | CCGG | 1 cut(s) | 502 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 279 |
| BsmAI | GTCTC | 1 cut(s) | 368 |
| BsnI | GGCC | 2 cut(s) | 117, 198 |
| Bso31I | GGTCTC | 1 cut(s) | 368 |
| Bsp143I | GATC | 3 cut(s) | 29, 337, 415 |
| Bsp19I | CCATGG | 1 cut(s) | 154 |
| BspANI | GGCC | 2 cut(s) | 117, 198 |
| BspFNI | CGCG | 1 cut(s) | 307 |
| BspLI | GGNNCC | 2 cut(s) | 180, 271 |
| BspPI | GGATC | 3 cut(s) | 37, 345, 410 |
| BspTNI | GGTCTC | 1 cut(s) | 368 |
| BsrDI | GCAATG | 1 cut(s) | 298 |
| BsrFI | RCCGGY | 1 cut(s) | 501 |
| BsrI | ACTGG | 2 cut(s) | 31, 419 |
| BssAI | RCCGGY | 1 cut(s) | 501 |
| BssECI | CCNNGG | 2 cut(s) | 154, 182 |
| BssMI | GATC | 3 cut(s) | 29, 337, 415 |
| BssNAI | GTATAC | 1 cut(s) | 499 |
| BssT1I | CCWWGG | 1 cut(s) | 154 |
| Bst1107I | GTATAC | 1 cut(s) | 499 |
| Bst2UI | CCWGG | 2 cut(s) | 176, 392 |
| BstC8I | GCNNGC | 1 cut(s) | 274 |
| BstDSI | CCRYGG | 1 cut(s) | 154 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 277 |
| BstF5I | GGATG | 1 cut(s) | 80 |
| BstFNI | CGCG | 1 cut(s) | 307 |
| BstHHI | GCGC | 1 cut(s) | 307 |
| BstKTI | GATC | 3 cut(s) | 32, 340, 418 |
| BstMAI | GTCTC | 1 cut(s) | 368 |
| BstMBI | GATC | 3 cut(s) | 29, 337, 415 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 228, 304 |
| BstNI | CCWGG | 2 cut(s) | 176, 392 |
| BstSCI | CCNGG | 2 cut(s) | 174, 390 |
| BstUI | CGCG | 1 cut(s) | 307 |
| BstX2I | RGATCY | 2 cut(s) | 29, 337 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 284 |
| BstYI | RGATCY | 2 cut(s) | 29, 337 |
| BstZ17I | GTATAC | 1 cut(s) | 499 |
| BsuRI | GGCC | 2 cut(s) | 117, 198 |
| BtgI | CCRYGG | 1 cut(s) | 154 |
| BtrI | CACGTC | 1 cut(s) | 113 |
| BtsCI | GGATG | 1 cut(s) | 80 |
| BtsIMutI | CAGTG | 1 cut(s) | 426 |
| Cac8I | GCNNGC | 1 cut(s) | 274 |
| CfoI | GCGC | 1 cut(s) | 307 |
| Cfr10I | RCCGGY | 1 cut(s) | 501 |
| Cfr13I | GGNCC | 2 cut(s) | 197, 504 |
| CpoI | CGGWCCG | 1 cut(s) | 504 |
| CsiI | ACCWGGT | 1 cut(s) | 174 |
| Csp6I | GTAC | 2 cut(s) | 309, 318 |
| CspAI | ACCGGT | 1 cut(s) | 501 |
| CspI | CGGWCCG | 1 cut(s) | 504 |
| CviAII | CATG | 1 cut(s) | 155 |
| CviJI | RGCY | 6 cut(s) | 117, 198, 236, 272, 350, 395 |
| CviKI_1 | RGCY | 6 cut(s) | 117, 198, 236, 272, 350, 395 |
| CviQI | GTAC | 2 cut(s) | 309, 318 |
| DpnI | GATC | 3 cut(s) | 31, 339, 417 |
| DpnII | GATC | 3 cut(s) | 29, 337, 415 |
| EaeI | YGGCCR | 1 cut(s) | 115 |
| Eco130I | CCWWGG | 1 cut(s) | 154 |
| Eco31I | GGTCTC | 1 cut(s) | 368 |
| Eco47I | GGWCC | 1 cut(s) | 504 |
| Eco57I | CTGAAG | 1 cut(s) | 285 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 277 |
| EcoRII | CCWGG | 2 cut(s) | 174, 390 |
| EcoT14I | CCWWGG | 1 cut(s) | 154 |
| ErhI | CCWWGG | 1 cut(s) | 154 |
| FaeI | CATG | 1 cut(s) | 158 |
| FaiI | YATR | 8 cut(s) | 102, 156, 189, 240, 242, 279, 410, 499 |
| FatI | CATG | 1 cut(s) | 154 |
| FauNDI | CATATG | 1 cut(s) | 240 |
| FblI | GTMKAC | 1 cut(s) | 498 |
| FokI | GGATG | 1 cut(s) | 67 |
| FspBI | CTAG | 4 cut(s) | 255, 332, 396, 458 |
| GlaI | GCGC | 1 cut(s) | 306 |
| HaeIII | GGCC | 2 cut(s) | 117, 198 |
| HapII | CCGG | 1 cut(s) | 502 |
| HhaI | GCGC | 1 cut(s) | 307 |
| Hin1II | CATG | 1 cut(s) | 158 |
| Hin6I | GCGC | 1 cut(s) | 305 |
| HinP1I | GCGC | 1 cut(s) | 305 |
| HinfI | GANTC | 1 cut(s) | 217 |
| HpaII | CCGG | 1 cut(s) | 502 |
| HphI | GGTGA | 1 cut(s) | 104 |
| Hpy166II | GTNNAC | 2 cut(s) | 73, 499 |
| Hpy188I | TCNGA | 3 cut(s) | 183, 265, 508 |
| Hpy188III | TCNNGA | 5 cut(s) | 18, 373, 386, 458, 467 |
| Hpy8I | GTNNAC | 2 cut(s) | 73, 499 |
| HpyAV | CCTTC | 2 cut(s) | 260, 358 |
| HpyCH4IV | ACGT | 1 cut(s) | 112 |
| HpyCH4V | TGCA | 1 cut(s) | 35 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 228, 304 |
| HpySE526I | ACGT | 1 cut(s) | 112 |
| Hsp92II | CATG | 1 cut(s) | 158 |
| HspAI | GCGC | 1 cut(s) | 305 |
| Kzo9I | GATC | 3 cut(s) | 29, 337, 415 |
| LmnI | GCTCC | 2 cut(s) | 256, 269 |
| MabI | ACCWGGT | 1 cut(s) | 174 |
| MaeI | CTAG | 4 cut(s) | 255, 332, 396, 458 |
| MaeII | ACGT | 1 cut(s) | 112 |
| MalI | GATC | 3 cut(s) | 31, 339, 417 |
| MboI | GATC | 3 cut(s) | 29, 337, 415 |
| MflI | RGATCY | 2 cut(s) | 29, 337 |
| MlsI | TGGCCA | 1 cut(s) | 117 |
| MluCI | AATT | 1 cut(s) | 190 |
| MluNI | TGGCCA | 1 cut(s) | 117 |
| MnlI | CCTC | 7 cut(s) | 74, 94, 101, 119, 177, 361, 365 |
| Mox20I | TGGCCA | 1 cut(s) | 117 |
| MscI | TGGCCA | 1 cut(s) | 117 |
| MslI | CAYNNNNRTG | 2 cut(s) | 282, 459 |
| Msp20I | TGGCCA | 1 cut(s) | 117 |
| MspI | CCGG | 1 cut(s) | 502 |
| MspR9I | CCNGG | 2 cut(s) | 176, 392 |
| MvaI | CCWGG | 2 cut(s) | 176, 392 |
| MvnI | CGCG | 1 cut(s) | 307 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 228, 304 |
| NcoI | CCATGG | 1 cut(s) | 154 |
| NdeI | CATATG | 1 cut(s) | 240 |
| NdeII | GATC | 3 cut(s) | 29, 337, 415 |
| NlaIII | CATG | 1 cut(s) | 158 |
| NlaIV | GGNNCC | 2 cut(s) | 180, 271 |
| PfeI | GAWTC | 1 cut(s) | 217 |
| PinAI | ACCGGT | 1 cut(s) | 501 |
| Psp6I | CCWGG | 2 cut(s) | 174, 390 |
| PspGI | CCWGG | 2 cut(s) | 174, 390 |
| PspN4I | GGNNCC | 2 cut(s) | 180, 271 |
| PspPI | GGNCC | 2 cut(s) | 197, 504 |
| PsuI | RGATCY | 2 cut(s) | 29, 337 |
| RsaI | GTAC | 2 cut(s) | 310, 319 |
| RsaNI | GTAC | 2 cut(s) | 309, 318 |
| RseI | CAYNNNNRTG | 2 cut(s) | 282, 459 |
| Rsr2I | CGGWCCG | 1 cut(s) | 504 |
| RsrII | CGGWCCG | 1 cut(s) | 504 |
| Sau3AI | GATC | 3 cut(s) | 29, 337, 415 |
| Sau96I | GGNCC | 2 cut(s) | 197, 504 |
| ScrFI | CCNGG | 2 cut(s) | 176, 392 |
| SetI | ASST | 7 cut(s) | 25, 115, 130, 180, 238, 284, 415 |
| SexAI | ACCWGGT | 1 cut(s) | 174 |
| SinI | GGWCC | 1 cut(s) | 504 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 282, 459 |
| SmlI | CTYRAG | 1 cut(s) | 356 |
| SmoI | CTYRAG | 1 cut(s) | 356 |
| Sse9I | AATT | 1 cut(s) | 190 |
| SspMI | CTAG | 4 cut(s) | 255, 332, 396, 458 |
| StyD4I | CCNGG | 2 cut(s) | 174, 390 |
| StyI | CCWWGG | 1 cut(s) | 154 |
| TaiI | ACGT | 1 cut(s) | 115 |
| TaqI | TCGA | 5 cut(s) | 66, 130, 372, 387, 426 |
| TasI | AATT | 1 cut(s) | 190 |
| TfiI | GAWTC | 1 cut(s) | 217 |
| TscAI | CASTG | 1 cut(s) | 426 |
| TspDTI | ATGAA | 2 cut(s) | 17, 257 |
| TspRI | CASTG | 1 cut(s) | 426 |
| VpaK11BI | GGWCC | 1 cut(s) | 504 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 277 |
| XbaI | TCTAGA | 1 cut(s) | 457 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 284 |
| XmiI | GTMKAC | 1 cut(s) | 498 |
| XspI | CTAG | 4 cut(s) | 255, 332, 396, 458 |