B-Box-type zinc finger
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 92 |
| Acc36I | ACCTGC | 1 cut(s) | 630 |
| AccI | GTMKAC | 1 cut(s) | 533 |
| AccII | CGCG | 5 cut(s) | 436, 452, 521, 655, 753 |
| AclWI | GGATC | 1 cut(s) | 700 |
| AcoI | YGGCCR | 1 cut(s) | 711 |
| AcyI | GRCGYC | 2 cut(s) | 539, 605 |
| AdeI | CACNNNGTG | 1 cut(s) | 761 |
| AfaI | GTAC | 1 cut(s) | 420 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 171 |
| AflIII | ACRYGT | 1 cut(s) | 653 |
| AgsI | TTSAA | 2 cut(s) | 337, 719 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 247 |
| AjnI | CCWGG | 3 cut(s) | 99, 597, 708 |
| AluBI | AGCT | 8 cut(s) | 8, 22, 38, 348, 496, 703, 727, 739 |
| AluI | AGCT | 8 cut(s) | 8, 22, 38, 348, 496, 703, 727, 739 |
| Alw21I | GWGCWC | 2 cut(s) | 24, 350 |
| Alw26I | GTCTC | 2 cut(s) | 283, 661 |
| AlwI | GGATC | 1 cut(s) | 700 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 664 |
| Ama87I | CYCGRG | 1 cut(s) | 728 |
| AoxI | GGCC | 3 cut(s) | 102, 711, 783 |
| ApeKI | GCWGC | 1 cut(s) | 81 |
| AspLEI | GCGC | 6 cut(s) | 404, 430, 436, 452, 753, 755 |
| AspS9I | GGNCC | 2 cut(s) | 94, 783 |
| AvaI | CYCGRG | 1 cut(s) | 728 |
| AvaII | GGWCC | 1 cut(s) | 94 |
| BaeGI | GKGCMC | 1 cut(s) | 585 |
| BanII | GRGCYC | 2 cut(s) | 24, 350 |
| Bbv12I | GWGCWC | 2 cut(s) | 24, 350 |
| BbvI | GCAGC | 1 cut(s) | 68 |
| BceAI | ACGGC | 4 cut(s) | 247, 552, 698, 773 |
| BciT130I | CCWGG | 3 cut(s) | 101, 599, 710 |
| BcoDI | GTCTC | 2 cut(s) | 283, 661 |
| BfaI | CTAG | 4 cut(s) | 9, 90, 282, 770 |
| BfuAI | ACCTGC | 1 cut(s) | 630 |
| BisI | GCNGC | 4 cut(s) | 82, 309, 522, 603 |
| BlpI | GCTNAGC | 1 cut(s) | 699 |
| BlsI | GCNGC | 4 cut(s) | 83, 310, 523, 604 |
| Bme1390I | CCNGG | 3 cut(s) | 101, 599, 710 |
| Bme18I | GGWCC | 1 cut(s) | 94 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 247 |
| BmeT110I | CYCGRG | 1 cut(s) | 728 |
| BmgT120I | GGNCC | 2 cut(s) | 94, 783 |
| BmiI | GGNNCC | 1 cut(s) | 95 |
| BmrFI | CCNGG | 3 cut(s) | 101, 599, 710 |
| BmrI | ACTGGG | 1 cut(s) | 241 |
| BmsI | GCATC | 1 cut(s) | 445 |
| BmuI | ACTGGG | 1 cut(s) | 241 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 699 |
| BsaHI | GRCGYC | 2 cut(s) | 539, 605 |
| BsaJI | CCNNGG | 2 cut(s) | 258, 519 |
| BsaWI | WCCGGW | 2 cut(s) | 164, 180 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 38, 68 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 171 |
| Bse118I | RCCGGY | 1 cut(s) | 694 |
| Bse1I | ACTGG | 1 cut(s) | 247 |
| BseBI | CCWGG | 3 cut(s) | 101, 599, 710 |
| BseDI | CCNNGG | 2 cut(s) | 258, 519 |
| BseGI | GGATG | 2 cut(s) | 126, 460 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 171 |
| BseMII | CTCAG | 5 cut(s) | 333, 371, 578, 656, 731 |
| BseNI | ACTGG | 1 cut(s) | 247 |
| BsePI | GCGCGC | 1 cut(s) | 751 |
| BseRI | GAGGAG | 2 cut(s) | 692, 788 |
| BseSI | GKGCMC | 1 cut(s) | 585 |
| BseXI | GCAGC | 1 cut(s) | 68 |
| BseYI | CCCAGC | 2 cut(s) | 320, 496 |
| BsgI | GTGCAG | 1 cut(s) | 508 |
| Bsh1236I | CGCG | 5 cut(s) | 436, 452, 521, 655, 753 |
| BshFI | GGCC | 3 cut(s) | 104, 713, 785 |
| BsiHKAI | GWGCWC | 2 cut(s) | 24, 350 |
| BsiHKCI | CYCGRG | 1 cut(s) | 728 |
| BsiSI | CCGG | 7 cut(s) | 165, 181, 206, 366, 386, 399, 695 |
| BslFI | GGGAC | 1 cut(s) | 254 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 171 |
| BsmAI | GTCTC | 2 cut(s) | 283, 661 |
| BsmBI | CGTCTC | 2 cut(s) | 283, 661 |
| BsmFI | GGGAC | 1 cut(s) | 254 |
| BsmI | GAATGC | 1 cut(s) | 550 |
| BsnI | GGCC | 3 cut(s) | 104, 713, 785 |
| BsoBI | CYCGRG | 1 cut(s) | 728 |
| Bsp1286I | GDGCHC | 3 cut(s) | 24, 350, 585 |
| Bsp143I | GATC | 2 cut(s) | 705, 766 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 699 |
| BspANI | GGCC | 3 cut(s) | 104, 713, 785 |
| BspCNI | CTCAG | 5 cut(s) | 334, 370, 579, 657, 732 |
| BspFNI | CGCG | 5 cut(s) | 436, 452, 521, 655, 753 |
| BspLI | GGNNCC | 1 cut(s) | 95 |
| BspMI | ACCTGC | 1 cut(s) | 630 |
| BspPI | GGATC | 1 cut(s) | 700 |
| BsrFI | RCCGGY | 1 cut(s) | 694 |
| BsrI | ACTGG | 1 cut(s) | 247 |
| BssAI | RCCGGY | 1 cut(s) | 694 |
| BssECI | CCNNGG | 2 cut(s) | 258, 519 |
| BssHII | GCGCGC | 1 cut(s) | 751 |
| BssMI | GATC | 2 cut(s) | 705, 766 |
| BssNI | GRCGYC | 2 cut(s) | 539, 605 |
| Bst2UI | CCWGG | 3 cut(s) | 101, 599, 710 |
| Bst6I | CTCTTC | 1 cut(s) | 259 |
| BstACI | GRCGYC | 2 cut(s) | 539, 605 |
| BstC8I | GCNNGC | 9 cut(s) | 20, 121, 203, 274, 432, 577, 581, 696, 753 |
| BstDEI | CTNAG | 6 cut(s) | 342, 357, 587, 665, 699, 740 |
| BstDSI | CCRYGG | 1 cut(s) | 519 |
| BstF5I | GGATG | 2 cut(s) | 126, 460 |
| BstFNI | CGCG | 5 cut(s) | 436, 452, 521, 655, 753 |
| BstHHI | GCGC | 6 cut(s) | 404, 430, 436, 452, 753, 755 |
| BstKTI | GATC | 2 cut(s) | 708, 769 |
| BstMAI | GTCTC | 2 cut(s) | 283, 661 |
| BstMBI | GATC | 2 cut(s) | 705, 766 |
| BstNI | CCWGG | 3 cut(s) | 101, 599, 710 |
| BstSCI | CCNGG | 3 cut(s) | 99, 597, 708 |
| BstSLI | GKGCMC | 1 cut(s) | 585 |
| BstUI | CGCG | 5 cut(s) | 436, 452, 521, 655, 753 |
| BstV1I | GCAGC | 1 cut(s) | 68 |
| BsuRI | GGCC | 3 cut(s) | 104, 713, 785 |
| BtgI | CCRYGG | 1 cut(s) | 519 |
| BtsCI | GGATG | 2 cut(s) | 126, 460 |
| BtsIMutI | CAGTG | 1 cut(s) | 285 |
| BveI | ACCTGC | 1 cut(s) | 630 |
| Cac8I | GCNNGC | 9 cut(s) | 20, 121, 203, 274, 432, 577, 581, 696, 753 |
| CaiI | CAGNNNCTG | 1 cut(s) | 664 |
| CfoI | GCGC | 6 cut(s) | 404, 430, 436, 452, 753, 755 |
| Cfr10I | RCCGGY | 1 cut(s) | 694 |
| Cfr13I | GGNCC | 2 cut(s) | 94, 783 |
| Cfr42I | CCGCGG | 1 cut(s) | 522 |
| CseI | GACGC | 5 cut(s) | 95, 265, 528, 594, 644 |
| Csp6I | GTAC | 1 cut(s) | 419 |
| CviAII | CATG | 2 cut(s) | 198, 224 |
| CviQI | GTAC | 1 cut(s) | 419 |
| DdeI | CTNAG | 6 cut(s) | 342, 357, 587, 665, 699, 740 |
| DpnI | GATC | 2 cut(s) | 707, 768 |
| DpnII | GATC | 2 cut(s) | 705, 766 |
| DraIII | CACNNNGTG | 1 cut(s) | 761 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 92 |
| DriI | GACNNNNNGTC | 1 cut(s) | 247 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 92 |
| EaeI | YGGCCR | 1 cut(s) | 711 |
| Eam1104I | CTCTTC | 1 cut(s) | 259 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 247 |
| EarI | CTCTTC | 1 cut(s) | 259 |
| EciI | GGCGGA | 4 cut(s) | 52, 119, 259, 315 |
| Ecl136II | GAGCTC | 2 cut(s) | 22, 348 |
| Eco24I | GRGCYC | 2 cut(s) | 24, 350 |
| Eco47I | GGWCC | 1 cut(s) | 94 |
| Eco53kI | GAGCTC | 2 cut(s) | 22, 348 |
| Eco88I | CYCGRG | 1 cut(s) | 728 |
| EcoICRI | GAGCTC | 2 cut(s) | 22, 348 |
| EcoRII | CCWGG | 3 cut(s) | 99, 597, 708 |
| EcoT38I | GRGCYC | 2 cut(s) | 24, 350 |
| Esp3I | CGTCTC | 2 cut(s) | 283, 661 |
| FaeI | CATG | 2 cut(s) | 201, 227 |
| FaiI | YATR | 5 cut(s) | 138, 199, 225, 479, 516 |
| FaqI | GGGAC | 1 cut(s) | 254 |
| FatI | CATG | 2 cut(s) | 197, 223 |
| FauI | CCCGC | 3 cut(s) | 86, 568, 726 |
| FblI | GTMKAC | 1 cut(s) | 533 |
| Fnu4HI | GCNGC | 4 cut(s) | 82, 309, 522, 603 |
| FokI | GGATG | 2 cut(s) | 113, 467 |
| FriOI | GRGCYC | 2 cut(s) | 24, 350 |
| Fsp4HI | GCNGC | 4 cut(s) | 82, 309, 522, 603 |
| FspBI | CTAG | 4 cut(s) | 9, 90, 282, 770 |
| GlaI | GCGC | 6 cut(s) | 403, 429, 435, 451, 752, 754 |
| GluI | GCNGC | 4 cut(s) | 82, 309, 522, 603 |
| GsaI | CCCAGC | 2 cut(s) | 324, 500 |
| HaeIII | GGCC | 3 cut(s) | 104, 713, 785 |
| HapII | CCGG | 7 cut(s) | 165, 181, 206, 366, 386, 399, 695 |
| HgaI | GACGC | 5 cut(s) | 95, 265, 528, 594, 644 |
| HhaI | GCGC | 6 cut(s) | 404, 430, 436, 452, 753, 755 |
| Hin1I | GRCGYC | 2 cut(s) | 539, 605 |
| Hin1II | CATG | 2 cut(s) | 201, 227 |
| Hin6I | GCGC | 6 cut(s) | 402, 428, 434, 450, 751, 753 |
| HinP1I | GCGC | 6 cut(s) | 402, 428, 434, 450, 751, 753 |
| HincII | GTYRAC | 1 cut(s) | 534 |
| HindII | GTYRAC | 1 cut(s) | 534 |
| HindIII | AAGCTT | 1 cut(s) | 36 |
| HinfI | GANTC | 5 cut(s) | 59, 290, 393, 627, 661 |
| HpaII | CCGG | 7 cut(s) | 165, 181, 206, 366, 386, 399, 695 |
| Hpy166II | GTNNAC | 3 cut(s) | 97, 534, 651 |
| Hpy188I | TCNGA | 5 cut(s) | 58, 174, 343, 660, 666 |
| Hpy188III | TCNNGA | 2 cut(s) | 687, 770 |
| Hpy8I | GTNNAC | 3 cut(s) | 97, 534, 651 |
| Hpy99I | CGWCG | 8 cut(s) | 89, 119, 239, 316, 448, 538, 544, 610 |
| HpyAV | CCTTC | 2 cut(s) | 76, 310 |
| HpyCH4V | TGCA | 3 cut(s) | 153, 458, 489 |
| HpyF3I | CTNAG | 6 cut(s) | 342, 357, 587, 665, 699, 740 |
| Hsp92I | GRCGYC | 2 cut(s) | 539, 605 |
| Hsp92II | CATG | 2 cut(s) | 201, 227 |
| HspAI | GCGC | 6 cut(s) | 402, 428, 434, 450, 751, 753 |
| KroI | GCCGGC | 1 cut(s) | 694 |
| KroNI | GCCGGC | 1 cut(s) | 696 |
| KspI | CCGCGG | 1 cut(s) | 522 |
| Kzo9I | GATC | 2 cut(s) | 705, 766 |
| LmnI | GCTCC | 3 cut(s) | 80, 353, 736 |
| Lsp1109I | GCAGC | 1 cut(s) | 68 |
| LweI | GCATC | 1 cut(s) | 445 |
| MaeI | CTAG | 4 cut(s) | 9, 90, 282, 770 |
| MaeIII | GTNAC | 2 cut(s) | 227, 352 |
| MalI | GATC | 2 cut(s) | 707, 768 |
| MboI | GATC | 2 cut(s) | 705, 766 |
| MboII | GAAGA | 1 cut(s) | 246 |
| MfeI | CAATTG | 1 cut(s) | 148 |
| MhlI | GDGCHC | 3 cut(s) | 24, 350, 585 |
| MluCI | AATT | 5 cut(s) | 148, 211, 481, 511, 744 |
| MluI | ACGCGT | 1 cut(s) | 653 |
| MmeI | TCCRAC | 1 cut(s) | 152 |
| MroNI | GCCGGC | 1 cut(s) | 694 |
| MspA1I | CMGCKG | 3 cut(s) | 81, 496, 521 |
| MspI | CCGG | 7 cut(s) | 165, 181, 206, 366, 386, 399, 695 |
| MspR9I | CCNGG | 3 cut(s) | 101, 599, 710 |
| MunI | CAATTG | 1 cut(s) | 148 |
| Mva1269I | GAATGC | 1 cut(s) | 550 |
| MvaI | CCWGG | 3 cut(s) | 101, 599, 710 |
| MvnI | CGCG | 5 cut(s) | 436, 452, 521, 655, 753 |
| NaeI | GCCGGC | 1 cut(s) | 696 |
| NdeII | GATC | 2 cut(s) | 705, 766 |
| NgoMIV | GCCGGC | 1 cut(s) | 694 |
| NlaIII | CATG | 2 cut(s) | 201, 227 |
| NlaIV | GGNNCC | 1 cut(s) | 95 |
| NmeAIII | GCCGAG | 1 cut(s) | 239 |
| PauI | GCGCGC | 1 cut(s) | 751 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 539 |
| PctI | GAATGC | 1 cut(s) | 550 |
| PdiI | GCCGGC | 1 cut(s) | 696 |
| PfeI | GAWTC | 5 cut(s) | 59, 290, 393, 627, 661 |
| PflFI | GACNNNGTC | 1 cut(s) | 538 |
| PkrI | GCNGC | 4 cut(s) | 83, 310, 523, 604 |
| Psp124BI | GAGCTC | 2 cut(s) | 24, 350 |
| Psp6I | CCWGG | 3 cut(s) | 99, 597, 708 |
| PspFI | CCCAGC | 2 cut(s) | 320, 496 |
| PspGI | CCWGG | 3 cut(s) | 99, 597, 708 |
| PspN4I | GGNNCC | 1 cut(s) | 95 |
| PspPI | GGNCC | 2 cut(s) | 94, 783 |
| PstNI | CAGNNNCTG | 1 cut(s) | 664 |
| PsyI | GACNNNGTC | 1 cut(s) | 538 |
| PteI | GCGCGC | 1 cut(s) | 751 |
| PvuII | CAGCTG | 1 cut(s) | 496 |
| RsaI | GTAC | 1 cut(s) | 420 |
| RsaNI | GTAC | 1 cut(s) | 419 |
| SacI | GAGCTC | 2 cut(s) | 24, 350 |
| SacII | CCGCGG | 1 cut(s) | 522 |
| SalI | GTCGAC | 1 cut(s) | 532 |
| SatI | GCNGC | 4 cut(s) | 82, 309, 522, 603 |
| Sau3AI | GATC | 2 cut(s) | 705, 766 |
| Sau96I | GGNCC | 2 cut(s) | 94, 783 |
| ScrFI | CCNGG | 3 cut(s) | 101, 599, 710 |
| SduI | GDGCHC | 3 cut(s) | 24, 350, 585 |
| SfaNI | GCATC | 1 cut(s) | 445 |
| Sfr303I | CCGCGG | 1 cut(s) | 522 |
| SgrBI | CCGCGG | 1 cut(s) | 522 |
| SinI | GGWCC | 1 cut(s) | 94 |
| Sse9I | AATT | 5 cut(s) | 148, 211, 481, 511, 744 |
| SspI | AATATT | 1 cut(s) | 382 |
| SspMI | CTAG | 4 cut(s) | 9, 90, 282, 770 |
| SstI | GAGCTC | 2 cut(s) | 24, 350 |
| StyD4I | CCNGG | 3 cut(s) | 99, 597, 708 |
| TaqI | TCGA | 4 cut(s) | 377, 443, 533, 542 |
| TasI | AATT | 5 cut(s) | 148, 211, 481, 511, 744 |
| TauI | GCSGC | 3 cut(s) | 311, 524, 605 |
| TfiI | GAWTC | 5 cut(s) | 59, 290, 393, 627, 661 |
| TscAI | CASTG | 1 cut(s) | 292 |
| TseI | GCWGC | 1 cut(s) | 81 |
| TspDTI | ATGAA | 2 cut(s) | 17, 466 |
| TspGWI | ACGGA | 2 cut(s) | 340, 685 |
| TspRI | CASTG | 1 cut(s) | 292 |
| Tth111I | GACNNNGTC | 1 cut(s) | 538 |
| VpaK11BI | GGWCC | 1 cut(s) | 94 |
| XbaI | TCTAGA | 1 cut(s) | 769 |
| XmiI | GTMKAC | 1 cut(s) | 533 |
| XspI | CTAG | 4 cut(s) | 9, 90, 282, 770 |