No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 711, 868 |
| AccBSI | CCGCTC | 1 cut(s) | 390 |
| AccII | CGCG | 1 cut(s) | 696 |
| AciI | CCGC | 2 cut(s) | 388, 790 |
| AclWI | GGATC | 1 cut(s) | 578 |
| AcoI | YGGCCR | 1 cut(s) | 855 |
| AcsI | RAATTY | 1 cut(s) | 455 |
| AcuI | CTGAAG | 1 cut(s) | 834 |
| AcyI | GRCGYC | 1 cut(s) | 712 |
| AfaI | GTAC | 1 cut(s) | 275 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 57 |
| AgsI | TTSAA | 1 cut(s) | 13 |
| AjiI | CACGTC | 1 cut(s) | 163 |
| AjnI | CCWGG | 1 cut(s) | 156 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 315, 347 |
| AleI | CACNNNNGTG | 1 cut(s) | 479 |
| AluBI | AGCT | 6 cut(s) | 81, 88, 182, 188, 589, 599 |
| AluI | AGCT | 6 cut(s) | 81, 88, 182, 188, 589, 599 |
| Alw21I | GWGCWC | 1 cut(s) | 72 |
| Alw26I | GTCTC | 3 cut(s) | 34, 319, 523 |
| AlwI | GGATC | 1 cut(s) | 578 |
| Ama87I | CYCGRG | 1 cut(s) | 146 |
| AoxI | GGCC | 2 cut(s) | 120, 855 |
| ApeKI | GCWGC | 1 cut(s) | 206 |
| ApoI | RAATTY | 1 cut(s) | 455 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 432 |
| AspLEI | GCGC | 2 cut(s) | 698, 714 |
| AvaI | CYCGRG | 1 cut(s) | 146 |
| BalI | TGGCCA | 1 cut(s) | 857 |
| BanI | GGYRCC | 2 cut(s) | 711, 868 |
| BanII | GRGCYC | 1 cut(s) | 300 |
| BbsI | GAAGAC | 1 cut(s) | 503 |
| Bbv12I | GWGCWC | 1 cut(s) | 72 |
| BbvI | GCAGC | 1 cut(s) | 218 |
| BccI | CCATC | 3 cut(s) | 119, 369, 561 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 542, 576 |
| BciT130I | CCWGG | 1 cut(s) | 158 |
| BciVI | GTATCC | 1 cut(s) | 733 |
| BcoDI | GTCTC | 3 cut(s) | 34, 319, 523 |
| BfaI | CTAG | 3 cut(s) | 134, 153, 365 |
| BfmI | CTRYAG | 1 cut(s) | 561 |
| BfoI | RGCGCY | 1 cut(s) | 715 |
| BfuI | GTATCC | 1 cut(s) | 733 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 215, 304, 798 |
| BglII | AGATCT | 2 cut(s) | 96, 653 |
| BisI | GCNGC | 1 cut(s) | 207 |
| BlsI | GCNGC | 1 cut(s) | 208 |
| Bme1390I | CCNGG | 1 cut(s) | 158 |
| BmeT110I | CYCGRG | 1 cut(s) | 146 |
| BmgBI | CACGTC | 1 cut(s) | 163 |
| BmiI | GGNNCC | 2 cut(s) | 713, 870 |
| BmrFI | CCNGG | 1 cut(s) | 158 |
| BpiI | GAAGAC | 1 cut(s) | 503 |
| BpmI | CTGGAG | 1 cut(s) | 254 |
| BpuEI | CTTGAG | 2 cut(s) | 101, 168 |
| Bsa29I | ATCGAT | 1 cut(s) | 552 |
| BsaHI | GRCGYC | 1 cut(s) | 712 |
| BsaI | GGTCTC | 2 cut(s) | 34, 319 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 57 |
| Bse1I | ACTGG | 2 cut(s) | 271, 403 |
| BseBI | CCWGG | 1 cut(s) | 158 |
| BseCI | ATCGAT | 1 cut(s) | 552 |
| BseGI | GGATG | 5 cut(s) | 237, 265, 339, 572, 627 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 57 |
| BseNI | ACTGG | 2 cut(s) | 271, 403 |
| BseXI | GCAGC | 1 cut(s) | 218 |
| Bsh1236I | CGCG | 1 cut(s) | 696 |
| BshFI | GGCC | 2 cut(s) | 122, 857 |
| BshNI | GGYRCC | 2 cut(s) | 711, 868 |
| BshVI | ATCGAT | 1 cut(s) | 552 |
| BsiHKAI | GWGCWC | 1 cut(s) | 72 |
| BsiHKCI | CYCGRG | 1 cut(s) | 146 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 57 |
| BsmAI | GTCTC | 3 cut(s) | 34, 319, 523 |
| BsmBI | CGTCTC | 1 cut(s) | 523 |
| BsnI | GGCC | 2 cut(s) | 122, 857 |
| Bso31I | GGTCTC | 2 cut(s) | 34, 319 |
| BsoBI | CYCGRG | 1 cut(s) | 146 |
| Bsp1286I | GDGCHC | 2 cut(s) | 72, 300 |
| Bsp143I | GATC | 3 cut(s) | 96, 570, 653 |
| BspACI | CCGC | 2 cut(s) | 388, 790 |
| BspANI | GGCC | 2 cut(s) | 122, 857 |
| BspDI | ATCGAT | 1 cut(s) | 552 |
| BspFNI | CGCG | 1 cut(s) | 696 |
| BspLI | GGNNCC | 2 cut(s) | 713, 870 |
| BspMAI | CTGCAG | 1 cut(s) | 565 |
| BspPI | GGATC | 1 cut(s) | 578 |
| BspQI | GCTCTTC | 1 cut(s) | 288 |
| BspT107I | GGYRCC | 2 cut(s) | 711, 868 |
| BspTNI | GGTCTC | 2 cut(s) | 34, 319 |
| BsrBI | CCGCTC | 1 cut(s) | 390 |
| BsrI | ACTGG | 2 cut(s) | 271, 403 |
| BssMI | GATC | 3 cut(s) | 96, 570, 653 |
| BssNI | GRCGYC | 1 cut(s) | 712 |
| Bst2UI | CCWGG | 1 cut(s) | 158 |
| Bst4CI | ACNGT | 1 cut(s) | 172 |
| Bst6I | CTCTTC | 2 cut(s) | 288, 810 |
| BstACI | GRCGYC | 1 cut(s) | 712 |
| BstC8I | GCNNGC | 1 cut(s) | 180 |
| BstDEI | CTNAG | 4 cut(s) | 107, 211, 734, 881 |
| BstF5I | GGATG | 5 cut(s) | 237, 265, 339, 572, 627 |
| BstFNI | CGCG | 1 cut(s) | 696 |
| BstH2I | RGCGCY | 1 cut(s) | 715 |
| BstHHI | GCGC | 2 cut(s) | 698, 714 |
| BstKTI | GATC | 3 cut(s) | 99, 573, 656 |
| BstMAI | GTCTC | 3 cut(s) | 34, 319, 523 |
| BstMBI | GATC | 3 cut(s) | 96, 570, 653 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 194, 203, 215, 224, 304, 798 |
| BstNI | CCWGG | 1 cut(s) | 158 |
| BstSCI | CCNGG | 1 cut(s) | 156 |
| BstSFI | CTRYAG | 1 cut(s) | 561 |
| BstUI | CGCG | 1 cut(s) | 696 |
| BstV1I | GCAGC | 1 cut(s) | 218 |
| BstV2I | GAAGAC | 1 cut(s) | 503 |
| BstX2I | RGATCY | 2 cut(s) | 96, 653 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 865 |
| BstYI | RGATCY | 2 cut(s) | 96, 653 |
| Bsu15I | ATCGAT | 1 cut(s) | 552 |
| BsuI | GTATCC | 1 cut(s) | 733 |
| BsuRI | GGCC | 2 cut(s) | 122, 857 |
| BsuTUI | ATCGAT | 1 cut(s) | 552 |
| BtrI | CACGTC | 1 cut(s) | 163 |
| BtsCI | GGATG | 5 cut(s) | 237, 265, 339, 572, 627 |
| Cac8I | GCNNGC | 1 cut(s) | 180 |
| CfoI | GCGC | 2 cut(s) | 698, 714 |
| ClaI | ATCGAT | 1 cut(s) | 552 |
| Csp6I | GTAC | 1 cut(s) | 274 |
| CviAII | CATG | 5 cut(s) | 344, 352, 393, 620, 859 |
| CviQI | GTAC | 1 cut(s) | 274 |
| DdeI | CTNAG | 4 cut(s) | 107, 211, 734, 881 |
| DinI | GGCGCC | 1 cut(s) | 713 |
| DpnI | GATC | 3 cut(s) | 98, 572, 655 |
| DpnII | GATC | 3 cut(s) | 96, 570, 653 |
| EaeI | YGGCCR | 1 cut(s) | 855 |
| Eam1104I | CTCTTC | 2 cut(s) | 288, 810 |
| EarI | CTCTTC | 2 cut(s) | 288, 810 |
| Eco24I | GRGCYC | 1 cut(s) | 300 |
| Eco31I | GGTCTC | 2 cut(s) | 34, 319 |
| Eco57I | CTGAAG | 1 cut(s) | 834 |
| Eco88I | CYCGRG | 1 cut(s) | 146 |
| EcoRI | GAATTC | 1 cut(s) | 455 |
| EcoRII | CCWGG | 1 cut(s) | 156 |
| EcoT38I | GRGCYC | 1 cut(s) | 300 |
| EgeI | GGCGCC | 1 cut(s) | 713 |
| EheI | GGCGCC | 1 cut(s) | 713 |
| Esp3I | CGTCTC | 1 cut(s) | 523 |
| FaeI | CATG | 5 cut(s) | 347, 355, 396, 623, 862 |
| FatI | CATG | 5 cut(s) | 343, 351, 392, 619, 858 |
| Fnu4HI | GCNGC | 1 cut(s) | 207 |
| FokI | GGATG | 5 cut(s) | 224, 272, 326, 579, 614 |
| FriOI | GRGCYC | 1 cut(s) | 300 |
| Fsp4HI | GCNGC | 1 cut(s) | 207 |
| FspBI | CTAG | 3 cut(s) | 134, 153, 365 |
| GlaI | GCGC | 2 cut(s) | 697, 713 |
| GluI | GCNGC | 1 cut(s) | 207 |
| GsuI | CTGGAG | 1 cut(s) | 254 |
| HaeII | RGCGCY | 1 cut(s) | 715 |
| HaeIII | GGCC | 2 cut(s) | 122, 857 |
| HhaI | GCGC | 2 cut(s) | 698, 714 |
| Hin1I | GRCGYC | 1 cut(s) | 712 |
| Hin1II | CATG | 5 cut(s) | 347, 355, 396, 623, 862 |
| Hin6I | GCGC | 2 cut(s) | 696, 712 |
| HinP1I | GCGC | 2 cut(s) | 696, 712 |
| HincII | GTYRAC | 2 cut(s) | 787, 823 |
| HindII | GTYRAC | 2 cut(s) | 787, 823 |
| HindIII | AAGCTT | 2 cut(s) | 79, 186 |
| HinfI | GANTC | 7 cut(s) | 129, 142, 263, 347, 499, 549, 680 |
| HpaI | GTTAAC | 1 cut(s) | 787 |
| Hpy166II | GTNNAC | 2 cut(s) | 787, 823 |
| Hpy188I | TCNGA | 1 cut(s) | 427 |
| Hpy188III | TCNNGA | 4 cut(s) | 146, 359, 413, 677 |
| Hpy8I | GTNNAC | 2 cut(s) | 787, 823 |
| HpyAV | CCTTC | 2 cut(s) | 297, 520 |
| HpyCH4III | ACNGT | 1 cut(s) | 172 |
| HpyCH4IV | ACGT | 3 cut(s) | 162, 751, 825 |
| HpyCH4V | TGCA | 2 cut(s) | 524, 563 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 194, 203, 215, 224, 304, 798 |
| HpyF3I | CTNAG | 4 cut(s) | 107, 211, 734, 881 |
| HpySE526I | ACGT | 3 cut(s) | 162, 751, 825 |
| Hsp92I | GRCGYC | 1 cut(s) | 712 |
| Hsp92II | CATG | 5 cut(s) | 347, 355, 396, 623, 862 |
| HspAI | GCGC | 2 cut(s) | 696, 712 |
| KasI | GGCGCC | 1 cut(s) | 711 |
| KspAI | GTTAAC | 1 cut(s) | 787 |
| Kzo9I | GATC | 3 cut(s) | 96, 570, 653 |
| LguI | GCTCTTC | 1 cut(s) | 288 |
| LmnI | GCTCC | 5 cut(s) | 34, 85, 273, 596, 763 |
| Lsp1109I | GCAGC | 1 cut(s) | 218 |
| MaeI | CTAG | 3 cut(s) | 134, 153, 365 |
| MaeII | ACGT | 3 cut(s) | 162, 751, 825 |
| MaeIII | GTNAC | 2 cut(s) | 5, 556 |
| MalI | GATC | 3 cut(s) | 98, 572, 655 |
| MbiI | CCGCTC | 1 cut(s) | 390 |
| MboI | GATC | 3 cut(s) | 96, 570, 653 |
| MboII | GAAGA | 6 cut(s) | 302, 305, 335, 508, 649, 827 |
| MflI | RGATCY | 2 cut(s) | 96, 653 |
| MhlI | GDGCHC | 2 cut(s) | 72, 300 |
| MlsI | TGGCCA | 1 cut(s) | 857 |
| MluCI | AATT | 5 cut(s) | 17, 243, 455, 646, 685 |
| MluNI | TGGCCA | 1 cut(s) | 857 |
| Mly113I | GGCGCC | 1 cut(s) | 712 |
| MlyI | GAGTC | 2 cut(s) | 341, 493 |
| MnlI | CCTC | 8 cut(s) | 208, 395, 701, 709, 811, 831, 835, 861 |
| Mox20I | TGGCCA | 1 cut(s) | 857 |
| MroXI | GAANNNNTTC | 1 cut(s) | 432 |
| MscI | TGGCCA | 1 cut(s) | 857 |
| MseI | TTAA | 4 cut(s) | 441, 449, 537, 786 |
| MslI | CAYNNNNRTG | 3 cut(s) | 479, 632, 863 |
| Msp20I | TGGCCA | 1 cut(s) | 857 |
| MspR9I | CCNGG | 1 cut(s) | 158 |
| MvaI | CCWGG | 1 cut(s) | 158 |
| MvnI | CGCG | 1 cut(s) | 696 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 194, 203, 215, 224, 304, 798 |
| NarI | GGCGCC | 1 cut(s) | 712 |
| NdeII | GATC | 3 cut(s) | 96, 570, 653 |
| NlaIII | CATG | 5 cut(s) | 347, 355, 396, 623, 862 |
| NlaIV | GGNNCC | 2 cut(s) | 713, 870 |
| OliI | CACNNNNGTG | 1 cut(s) | 479 |
| PaeR7I | CTCGAG | 1 cut(s) | 146 |
| PciSI | GCTCTTC | 1 cut(s) | 288 |
| PdmI | GAANNNNTTC | 1 cut(s) | 432 |
| PfeI | GAWTC | 5 cut(s) | 129, 142, 263, 549, 680 |
| PkrI | GCNGC | 1 cut(s) | 208 |
| PleI | GAGTC | 2 cut(s) | 341, 493 |
| PluTI | GGCGCC | 1 cut(s) | 715 |
| PpsI | GAGTC | 2 cut(s) | 341, 493 |
| Psp6I | CCWGG | 1 cut(s) | 156 |
| PspGI | CCWGG | 1 cut(s) | 156 |
| PspN4I | GGNNCC | 2 cut(s) | 713, 870 |
| PstI | CTGCAG | 1 cut(s) | 565 |
| PsuI | RGATCY | 2 cut(s) | 96, 653 |
| RsaI | GTAC | 1 cut(s) | 275 |
| RsaNI | GTAC | 1 cut(s) | 274 |
| RseI | CAYNNNNRTG | 3 cut(s) | 479, 632, 863 |
| SapI | GCTCTTC | 1 cut(s) | 288 |
| SaqAI | TTAA | 4 cut(s) | 441, 449, 537, 786 |
| SatI | GCNGC | 1 cut(s) | 207 |
| Sau3AI | GATC | 3 cut(s) | 96, 570, 653 |
| SchI | GAGTC | 2 cut(s) | 341, 493 |
| ScrFI | CCNGG | 1 cut(s) | 158 |
| SduI | GDGCHC | 2 cut(s) | 72, 300 |
| SfcI | CTRYAG | 1 cut(s) | 561 |
| SfoI | GGCGCC | 1 cut(s) | 713 |
| Sfr274I | CTCGAG | 1 cut(s) | 146 |
| SlaI | CTCGAG | 1 cut(s) | 146 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 479, 632, 863 |
| SmlI | CTYRAG | 3 cut(s) | 116, 146, 183 |
| SmoI | CTYRAG | 3 cut(s) | 116, 146, 183 |
| Sse9I | AATT | 5 cut(s) | 17, 243, 455, 646, 685 |
| SsiI | CCGC | 2 cut(s) | 388, 790 |
| SspDI | GGCGCC | 1 cut(s) | 711 |
| SspMI | CTAG | 3 cut(s) | 134, 153, 365 |
| StyD4I | CCNGG | 1 cut(s) | 156 |
| TaaI | ACNGT | 1 cut(s) | 172 |
| TaiI | ACGT | 3 cut(s) | 165, 754, 828 |
| TaqI | TCGA | 4 cut(s) | 147, 321, 547, 552 |
| TasI | AATT | 5 cut(s) | 17, 243, 455, 646, 685 |
| TfiI | GAWTC | 5 cut(s) | 129, 142, 263, 549, 680 |
| Tru1I | TTAA | 4 cut(s) | 441, 449, 537, 786 |
| Tru9I | TTAA | 4 cut(s) | 441, 449, 537, 786 |
| TseI | GCWGC | 1 cut(s) | 206 |
| TspDTI | ATGAA | 4 cut(s) | 299, 303, 572, 617 |
| TspGWI | ACGGA | 1 cut(s) | 822 |
| XapI | RAATTY | 1 cut(s) | 455 |
| XhoI | CTCGAG | 1 cut(s) | 146 |
| XmnI | GAANNNNTTC | 1 cut(s) | 432 |
| XspI | CTAG | 3 cut(s) | 134, 153, 365 |