gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 79 |
| AjiI | CACGTC | 1 cut(s) | 136 |
| AjnI | CCWGG | 2 cut(s) | 105, 129 |
| AluBI | AGCT | 2 cut(s) | 155, 161 |
| AluI | AGCT | 2 cut(s) | 155, 161 |
| Ama87I | CYCGRG | 1 cut(s) | 119 |
| AoxI | GGCC | 1 cut(s) | 93 |
| ApeKI | GCWGC | 1 cut(s) | 179 |
| AvaI | CYCGRG | 1 cut(s) | 119 |
| BccI | CCATC | 1 cut(s) | 92 |
| BciT130I | CCWGG | 2 cut(s) | 107, 131 |
| BciVI | GTATCC | 1 cut(s) | 103 |
| BfaI | CTAG | 1 cut(s) | 126 |
| BfuI | GTATCC | 1 cut(s) | 103 |
| BisI | GCNGC | 1 cut(s) | 180 |
| BlsI | GCNGC | 1 cut(s) | 181 |
| Bme1390I | CCNGG | 2 cut(s) | 107, 131 |
| BmeT110I | CYCGRG | 1 cut(s) | 119 |
| BmgBI | CACGTC | 1 cut(s) | 136 |
| BmrFI | CCNGG | 2 cut(s) | 107, 131 |
| BmsI | GCATC | 1 cut(s) | 94 |
| BpuEI | CTTGAG | 2 cut(s) | 74, 141 |
| Bse1I | ACTGG | 1 cut(s) | 49 |
| BseBI | CCWGG | 2 cut(s) | 107, 131 |
| BseNI | ACTGG | 1 cut(s) | 49 |
| BshFI | GGCC | 1 cut(s) | 95 |
| BsiHKCI | CYCGRG | 1 cut(s) | 119 |
| BsnI | GGCC | 1 cut(s) | 95 |
| BsoBI | CYCGRG | 1 cut(s) | 119 |
| BspACI | CCGC | 1 cut(s) | 79 |
| BspANI | GGCC | 1 cut(s) | 95 |
| BsrI | ACTGG | 1 cut(s) | 49 |
| Bst2UI | CCWGG | 2 cut(s) | 107, 131 |
| Bst4CI | ACNGT | 1 cut(s) | 145 |
| BstC8I | GCNNGC | 2 cut(s) | 83, 153 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 167, 176 |
| BstNI | CCWGG | 2 cut(s) | 107, 131 |
| BstSCI | CCNGG | 2 cut(s) | 105, 129 |
| BsuI | GTATCC | 1 cut(s) | 103 |
| BsuRI | GGCC | 1 cut(s) | 95 |
| BtrI | CACGTC | 1 cut(s) | 136 |
| Cac8I | GCNNGC | 2 cut(s) | 83, 153 |
| CviJI | RGCY | 7 cut(s) | 48, 95, 124, 129, 155, 161, 182 |
| CviKI_1 | RGCY | 7 cut(s) | 48, 95, 124, 129, 155, 161, 182 |
| EciI | GGCGGA | 1 cut(s) | 68 |
| Eco88I | CYCGRG | 1 cut(s) | 119 |
| EcoRII | CCWGG | 2 cut(s) | 105, 129 |
| FaiI | YATR | 1 cut(s) | 187 |
| Fnu4HI | GCNGC | 1 cut(s) | 180 |
| Fsp4HI | GCNGC | 1 cut(s) | 180 |
| FspBI | CTAG | 1 cut(s) | 126 |
| GluI | GCNGC | 1 cut(s) | 180 |
| HaeIII | GGCC | 1 cut(s) | 95 |
| HindIII | AAGCTT | 1 cut(s) | 159 |
| HinfI | GANTC | 2 cut(s) | 102, 115 |
| Hpy188I | TCNGA | 1 cut(s) | 52 |
| Hpy188III | TCNNGA | 2 cut(s) | 71, 119 |
| HpyCH4III | ACNGT | 1 cut(s) | 145 |
| HpyCH4IV | ACGT | 1 cut(s) | 135 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 167, 176 |
| HpySE526I | ACGT | 1 cut(s) | 135 |
| LmnI | GCTCC | 1 cut(s) | 34 |
| LpnPI | CCDG | 8 cut(s) | 23, 30, 46, 92, 95, 116, 119, 143 |
| LweI | GCATC | 1 cut(s) | 94 |
| MaeI | CTAG | 1 cut(s) | 126 |
| MaeII | ACGT | 1 cut(s) | 135 |
| MaeIII | GTNAC | 1 cut(s) | 5 |
| MluCI | AATT | 1 cut(s) | 17 |
| MspR9I | CCNGG | 2 cut(s) | 107, 131 |
| MvaI | CCWGG | 2 cut(s) | 107, 131 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 167, 176 |
| PaeR7I | CTCGAG | 1 cut(s) | 119 |
| PfeI | GAWTC | 2 cut(s) | 102, 115 |
| PfoI | TCCNGGA | 1 cut(s) | 105 |
| PkrI | GCNGC | 1 cut(s) | 181 |
| Psp6I | CCWGG | 2 cut(s) | 105, 129 |
| PspGI | CCWGG | 2 cut(s) | 105, 129 |
| SatI | GCNGC | 1 cut(s) | 180 |
| ScrFI | CCNGG | 2 cut(s) | 107, 131 |
| SetI | ASST | 5 cut(s) | 12, 65, 138, 157, 163 |
| SfaNI | GCATC | 1 cut(s) | 94 |
| Sfr274I | CTCGAG | 1 cut(s) | 119 |
| SlaI | CTCGAG | 1 cut(s) | 119 |
| SmlI | CTYRAG | 3 cut(s) | 89, 119, 156 |
| SmoI | CTYRAG | 3 cut(s) | 89, 119, 156 |
| Sse9I | AATT | 1 cut(s) | 17 |
| SsiI | CCGC | 1 cut(s) | 79 |
| SspMI | CTAG | 1 cut(s) | 126 |
| StyD4I | CCNGG | 2 cut(s) | 105, 129 |
| TaaI | ACNGT | 1 cut(s) | 145 |
| TaiI | ACGT | 1 cut(s) | 138 |
| TaqI | TCGA | 1 cut(s) | 120 |
| TasI | AATT | 1 cut(s) | 17 |
| TfiI | GAWTC | 2 cut(s) | 102, 115 |
| TseI | GCWGC | 1 cut(s) | 179 |
| XhoI | CTCGAG | 1 cut(s) | 119 |
| XspI | CTAG | 1 cut(s) | 126 |