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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 729 |
| AatII | GACGTC | 1 cut(s) | 1550 |
| AccB1I | GGYRCC | 1 cut(s) | 998 |
| AccI | GTMKAC | 1 cut(s) | 1219 |
| AccII | CGCG | 1 cut(s) | 1714 |
| AccIII | TCCGGA | 1 cut(s) | 649 |
| AciI | CCGC | 8 cut(s) | 79, 361, 934, 1230, 1312, 1347, 1358, 1833 |
| AclWI | GGATC | 3 cut(s) | 551, 621, 1466 |
| AcoI | YGGCCR | 1 cut(s) | 829 |
| AcsI | RAATTY | 2 cut(s) | 428, 1081 |
| AcyI | GRCGYC | 6 cut(s) | 969, 981, 999, 1547, 1682, 1717 |
| AfaI | GTAC | 3 cut(s) | 248, 1148, 1762 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 751, 943, 947, 1331, 1394, 1542, 1562, 1664 |
| AflIII | ACRYGT | 1 cut(s) | 1875 |
| AgsI | TTSAA | 2 cut(s) | 376, 1421 |
| AjnI | CCWGG | 2 cut(s) | 129, 1521 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 288, 320 |
| AluBI | AGCT | 9 cut(s) | 155, 161, 562, 572, 861, 1205, 1258, 1561, 1701 |
| AluI | AGCT | 9 cut(s) | 155, 161, 562, 572, 861, 1205, 1258, 1561, 1701 |
| Alw21I | GWGCWC | 1 cut(s) | 564 |
| Alw26I | GTCTC | 8 cut(s) | 292, 496, 928, 1167, 1289, 1370, 1467, 1647 |
| AlwI | GGATC | 3 cut(s) | 551, 621, 1466 |
| Ama87I | CYCGRG | 1 cut(s) | 119 |
| Aor13HI | TCCGGA | 1 cut(s) | 649 |
| AoxI | GGCC | 3 cut(s) | 829, 1553, 1577 |
| ApeKI | GCWGC | 2 cut(s) | 179, 1013 |
| ApoI | RAATTY | 2 cut(s) | 428, 1081 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1865, 1897 |
| AspA2I | CCTAGG | 2 cut(s) | 941, 1003 |
| AspLEI | GCGC | 5 cut(s) | 687, 886, 953, 1001, 1708 |
| AspS9I | GGNCC | 4 cut(s) | 731, 1554, 1578, 1810 |
| AsuC2I | CCSGG | 1 cut(s) | 1659 |
| AsuHPI | GGTGA | 3 cut(s) | 1004, 1012, 1019 |
| AsuII | TTCGAA | 1 cut(s) | 1589 |
| AvaI | CYCGRG | 1 cut(s) | 119 |
| AvaII | GGWCC | 2 cut(s) | 731, 1810 |
| AvrII | CCTAGG | 2 cut(s) | 941, 1003 |
| BalI | TGGCCA | 1 cut(s) | 831 |
| BanI | GGYRCC | 1 cut(s) | 998 |
| BanII | GRGCYC | 1 cut(s) | 564 |
| BbsI | GAAGAC | 3 cut(s) | 273, 476, 1375 |
| Bbv12I | GWGCWC | 1 cut(s) | 564 |
| BbvI | GCAGC | 2 cut(s) | 191, 1000 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 515, 549, 1169, 1203 |
| BciT130I | CCWGG | 2 cut(s) | 131, 1523 |
| BciVI | GTATCC | 2 cut(s) | 706, 1588 |
| BclI | TGATCA | 1 cut(s) | 1620 |
| BcnI | CCSGG | 1 cut(s) | 1659 |
| BcoDI | GTCTC | 8 cut(s) | 292, 496, 928, 1167, 1289, 1370, 1467, 1647 |
| BfaI | CTAG | 8 cut(s) | 126, 338, 942, 1004, 1259, 1350, 1562, 1692 |
| BfoI | RGCGCY | 3 cut(s) | 688, 887, 1002 |
| BfuI | GTATCC | 2 cut(s) | 706, 1588 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 188 |
| BisI | GCNGC | 3 cut(s) | 180, 1014, 1833 |
| BlnI | CCTAGG | 2 cut(s) | 941, 1003 |
| BlsI | GCNGC | 3 cut(s) | 181, 1015, 1834 |
| Bme1390I | CCNGG | 3 cut(s) | 131, 1523, 1659 |
| Bme18I | GGWCC | 2 cut(s) | 731, 1810 |
| BmeT110I | CYCGRG | 1 cut(s) | 119 |
| BmgT120I | GGNCC | 4 cut(s) | 731, 1554, 1578, 1810 |
| BmiI | GGNNCC | 5 cut(s) | 785, 844, 1000, 1556, 1812 |
| BmrFI | CCNGG | 3 cut(s) | 131, 1523, 1659 |
| BmsI | GCATC | 4 cut(s) | 94, 442, 1000, 1556 |
| BpiI | GAAGAC | 3 cut(s) | 273, 476, 1375 |
| BpmI | CTGGAG | 2 cut(s) | 227, 1284 |
| Bpu14I | TTCGAA | 1 cut(s) | 1589 |
| BpuEI | CTTGAG | 2 cut(s) | 74, 141 |
| BpuMI | CCSGG | 1 cut(s) | 1659 |
| Bsa29I | ATCGAT | 1 cut(s) | 525 |
| BsaHI | GRCGYC | 6 cut(s) | 969, 981, 999, 1547, 1682, 1717 |
| BsaI | GGTCTC | 2 cut(s) | 292, 1167 |
| BsaJI | CCNNGG | 5 cut(s) | 630, 941, 972, 1003, 1581 |
| BsaWI | WCCGGW | 1 cut(s) | 649 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 751, 943, 947, 1331, 1394, 1542, 1562, 1664 |
| Bse1I | ACTGG | 4 cut(s) | 49, 244, 1270, 1846 |
| Bse3DI | GCAATG | 1 cut(s) | 1120 |
| BseAI | TCCGGA | 1 cut(s) | 649 |
| BseBI | CCWGG | 2 cut(s) | 131, 1523 |
| BseCI | ATCGAT | 1 cut(s) | 525 |
| BseDI | CCNNGG | 5 cut(s) | 630, 941, 972, 1003, 1581 |
| BseGI | GGATG | 8 cut(s) | 139, 210, 927, 982, 1044, 1308, 1571, 1862 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 751, 943, 947, 1331, 1394, 1542, 1562, 1664 |
| BseMI | GCAATG | 1 cut(s) | 1120 |
| BseNI | ACTGG | 4 cut(s) | 49, 244, 1270, 1846 |
| BseXI | GCAGC | 2 cut(s) | 191, 1000 |
| BseYI | CCCAGC | 1 cut(s) | 1557 |
| Bsh1236I | CGCG | 1 cut(s) | 1714 |
| BshFI | GGCC | 3 cut(s) | 831, 1555, 1579 |
| BshNI | GGYRCC | 1 cut(s) | 998 |
| BshVI | ATCGAT | 1 cut(s) | 525 |
| BsiHKAI | GWGCWC | 1 cut(s) | 564 |
| BsiHKCI | CYCGRG | 1 cut(s) | 119 |
| BsiSI | CCGG | 2 cut(s) | 650, 1658 |
| BslFI | GGGAC | 3 cut(s) | 941, 1436, 1693 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 751, 943, 947, 1331, 1394, 1542, 1562, 1664 |
| BsmAI | GTCTC | 8 cut(s) | 292, 496, 928, 1167, 1289, 1370, 1467, 1647 |
| BsmBI | CGTCTC | 2 cut(s) | 496, 1647 |
| BsmFI | GGGAC | 3 cut(s) | 941, 1436, 1693 |
| BsnI | GGCC | 3 cut(s) | 831, 1555, 1579 |
| Bso31I | GGTCTC | 2 cut(s) | 292, 1167 |
| BsoBI | CYCGRG | 1 cut(s) | 119 |
| Bsp119I | TTCGAA | 1 cut(s) | 1589 |
| Bsp1286I | GDGCHC | 1 cut(s) | 564 |
| Bsp13I | TCCGGA | 1 cut(s) | 649 |
| Bsp1407I | TGTACA | 1 cut(s) | 1146 |
| Bsp143I | GATC | 8 cut(s) | 444, 543, 626, 1041, 1336, 1471, 1491, 1620 |
| Bsp19I | CCATGG | 1 cut(s) | 972 |
| BspACI | CCGC | 8 cut(s) | 79, 361, 934, 1230, 1312, 1347, 1358, 1833 |
| BspANI | GGCC | 3 cut(s) | 831, 1555, 1579 |
| BspDI | ATCGAT | 1 cut(s) | 525 |
| BspEI | TCCGGA | 1 cut(s) | 649 |
| BspFNI | CGCG | 1 cut(s) | 1714 |
| BspHI | TCATGA | 2 cut(s) | 556, 1645 |
| BspLI | GGNNCC | 5 cut(s) | 785, 844, 1000, 1556, 1812 |
| BspPI | GGATC | 3 cut(s) | 551, 621, 1466 |
| BspT104I | TTCGAA | 1 cut(s) | 1589 |
| BspT107I | GGYRCC | 1 cut(s) | 998 |
| BspTNI | GGTCTC | 2 cut(s) | 292, 1167 |
| BsrDI | GCAATG | 1 cut(s) | 1120 |
| BsrGI | TGTACA | 1 cut(s) | 1146 |
| BsrI | ACTGG | 4 cut(s) | 49, 244, 1270, 1846 |
| BssECI | CCNNGG | 5 cut(s) | 630, 941, 972, 1003, 1581 |
| BssMI | GATC | 8 cut(s) | 444, 543, 626, 1041, 1336, 1471, 1491, 1620 |
| BssNI | GRCGYC | 6 cut(s) | 969, 981, 999, 1547, 1682, 1717 |
| BssT1I | CCWWGG | 3 cut(s) | 941, 972, 1003 |
| Bst2UI | CCWGG | 2 cut(s) | 131, 1523 |
| Bst4CI | ACNGT | 4 cut(s) | 145, 922, 1381, 1484 |
| Bst6I | CTCTTC | 1 cut(s) | 784 |
| BstACI | GRCGYC | 6 cut(s) | 969, 981, 999, 1547, 1682, 1717 |
| BstAUI | TGTACA | 1 cut(s) | 1146 |
| BstBI | TTCGAA | 1 cut(s) | 1589 |
| BstC8I | GCNNGC | 7 cut(s) | 83, 153, 938, 949, 1360, 1519, 1847 |
| BstDEI | CTNAG | 5 cut(s) | 184, 510, 675, 707, 855 |
| BstDSI | CCRYGG | 3 cut(s) | 630, 972, 1581 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1540 |
| BstF5I | GGATG | 8 cut(s) | 139, 210, 927, 982, 1044, 1308, 1571, 1862 |
| BstFNI | CGCG | 1 cut(s) | 1714 |
| BstH2I | RGCGCY | 3 cut(s) | 688, 887, 1002 |
| BstHHI | GCGC | 5 cut(s) | 687, 886, 953, 1001, 1708 |
| BstKTI | GATC | 8 cut(s) | 447, 546, 629, 1044, 1339, 1474, 1494, 1623 |
| BstMAI | GTCTC | 8 cut(s) | 292, 496, 928, 1167, 1289, 1370, 1467, 1647 |
| BstMBI | GATC | 8 cut(s) | 444, 543, 626, 1041, 1336, 1471, 1491, 1620 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 188, 197, 691, 881, 1355 |
| BstNI | CCWGG | 2 cut(s) | 131, 1523 |
| BstNSI | RCATGY | 3 cut(s) | 1517, 1849, 1879 |
| BstSCI | CCNGG | 3 cut(s) | 129, 1521, 1657 |
| BstUI | CGCG | 1 cut(s) | 1714 |
| BstV1I | GCAGC | 2 cut(s) | 191, 1000 |
| BstV2I | GAAGAC | 3 cut(s) | 273, 476, 1375 |
| BstX2I | RGATCY | 1 cut(s) | 626 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 839, 1727 |
| BstYI | RGATCY | 1 cut(s) | 626 |
| Bsu15I | ATCGAT | 1 cut(s) | 525 |
| BsuI | GTATCC | 2 cut(s) | 706, 1588 |
| BsuRI | GGCC | 3 cut(s) | 831, 1555, 1579 |
| BsuTUI | ATCGAT | 1 cut(s) | 525 |
| BtgI | CCRYGG | 3 cut(s) | 630, 972, 1581 |
| BtgZI | GCGATG | 1 cut(s) | 470 |
| BtsCI | GGATG | 8 cut(s) | 139, 210, 927, 982, 1044, 1308, 1571, 1862 |
| BtsIMutI | CAGTG | 3 cut(s) | 918, 1489, 1839 |
| Cac8I | GCNNGC | 7 cut(s) | 83, 153, 938, 949, 1360, 1519, 1847 |
| CciI | TCATGA | 2 cut(s) | 556, 1645 |
| CfoI | GCGC | 5 cut(s) | 687, 886, 953, 1001, 1708 |
| Cfr13I | GGNCC | 4 cut(s) | 731, 1554, 1578, 1810 |
| ClaI | ATCGAT | 1 cut(s) | 525 |
| CseI | GACGC | 6 cut(s) | 881, 970, 977, 1690, 1725, 1838 |
| Csp6I | GTAC | 3 cut(s) | 247, 1147, 1761 |
| CviQI | GTAC | 3 cut(s) | 247, 1147, 1761 |
| DdeI | CTNAG | 5 cut(s) | 184, 510, 675, 707, 855 |
| DinI | GGCGCC | 1 cut(s) | 1000 |
| DpnI | GATC | 8 cut(s) | 446, 545, 628, 1043, 1338, 1473, 1493, 1622 |
| DpnII | GATC | 8 cut(s) | 444, 543, 626, 1041, 1336, 1471, 1491, 1620 |
| DraI | TTTAAA | 1 cut(s) | 880 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 729 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 729 |
| EaeI | YGGCCR | 1 cut(s) | 829 |
| Eam1104I | CTCTTC | 1 cut(s) | 784 |
| EarI | CTCTTC | 1 cut(s) | 784 |
| EciI | GGCGGA | 2 cut(s) | 68, 1301 |
| Ecl136II | GAGCTC | 1 cut(s) | 562 |
| Eco130I | CCWWGG | 3 cut(s) | 941, 972, 1003 |
| Eco24I | GRGCYC | 1 cut(s) | 564 |
| Eco31I | GGTCTC | 2 cut(s) | 292, 1167 |
| Eco32I | GATATC | 3 cut(s) | 56, 76, 1741 |
| Eco47I | GGWCC | 2 cut(s) | 731, 1810 |
| Eco53kI | GAGCTC | 1 cut(s) | 562 |
| Eco88I | CYCGRG | 1 cut(s) | 119 |
| EcoICRI | GAGCTC | 1 cut(s) | 562 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1540 |
| EcoRI | GAATTC | 1 cut(s) | 428 |
| EcoRII | CCWGG | 2 cut(s) | 129, 1521 |
| EcoRV | GATATC | 3 cut(s) | 56, 76, 1741 |
| EcoT14I | CCWWGG | 3 cut(s) | 941, 972, 1003 |
| EcoT38I | GRGCYC | 1 cut(s) | 564 |
| EgeI | GGCGCC | 1 cut(s) | 1000 |
| EheI | GGCGCC | 1 cut(s) | 1000 |
| ErhI | CCWWGG | 3 cut(s) | 941, 972, 1003 |
| Esp3I | CGTCTC | 2 cut(s) | 496, 1647 |
| FaqI | GGGAC | 3 cut(s) | 941, 1436, 1693 |
| FauI | CCCGC | 1 cut(s) | 1351 |
| FbaI | TGATCA | 1 cut(s) | 1620 |
| FblI | GTMKAC | 1 cut(s) | 1219 |
| Fnu4HI | GCNGC | 3 cut(s) | 180, 1014, 1833 |
| FokI | GGATG | 8 cut(s) | 146, 197, 914, 989, 1031, 1295, 1578, 1849 |
| FriOI | GRGCYC | 1 cut(s) | 564 |
| Fsp4HI | GCNGC | 3 cut(s) | 180, 1014, 1833 |
| FspBI | CTAG | 8 cut(s) | 126, 338, 942, 1004, 1259, 1350, 1562, 1692 |
| GlaI | GCGC | 5 cut(s) | 686, 885, 952, 1000, 1707 |
| GluI | GCNGC | 3 cut(s) | 180, 1014, 1833 |
| GsaI | CCCAGC | 1 cut(s) | 1561 |
| GsuI | CTGGAG | 2 cut(s) | 227, 1284 |
| HaeII | RGCGCY | 3 cut(s) | 688, 887, 1002 |
| HaeIII | GGCC | 3 cut(s) | 831, 1555, 1579 |
| HapII | CCGG | 2 cut(s) | 650, 1658 |
| HgaI | GACGC | 6 cut(s) | 881, 970, 977, 1690, 1725, 1838 |
| HhaI | GCGC | 5 cut(s) | 687, 886, 953, 1001, 1708 |
| Hin1I | GRCGYC | 6 cut(s) | 969, 981, 999, 1547, 1682, 1717 |
| Hin6I | GCGC | 5 cut(s) | 685, 884, 951, 999, 1706 |
| HinP1I | GCGC | 5 cut(s) | 685, 884, 951, 999, 1706 |
| HindIII | AAGCTT | 1 cut(s) | 159 |
| HpaII | CCGG | 2 cut(s) | 650, 1658 |
| HphI | GGTGA | 3 cut(s) | 1004, 1012, 1019 |
| Hpy166II | GTNNAC | 3 cut(s) | 797, 1149, 1220 |
| Hpy188I | TCNGA | 2 cut(s) | 400, 1810 |
| Hpy8I | GTNNAC | 3 cut(s) | 797, 1149, 1220 |
| Hpy99I | CGWCG | 2 cut(s) | 1393, 1719 |
| HpyAV | CCTTC | 6 cut(s) | 270, 493, 749, 1520, 1585, 1881 |
| HpyCH4III | ACNGT | 4 cut(s) | 145, 922, 1381, 1484 |
| HpyCH4IV | ACGT | 5 cut(s) | 312, 799, 1284, 1531, 1547 |
| HpyCH4V | TGCA | 6 cut(s) | 497, 536, 1016, 1113, 1190, 1330 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 188, 197, 691, 881, 1355 |
| HpyF3I | CTNAG | 5 cut(s) | 184, 510, 675, 707, 855 |
| HpySE526I | ACGT | 5 cut(s) | 312, 799, 1284, 1531, 1547 |
| Hsp92I | GRCGYC | 6 cut(s) | 969, 981, 999, 1547, 1682, 1717 |
| HspAI | GCGC | 5 cut(s) | 685, 884, 951, 999, 1706 |
| KasI | GGCGCC | 1 cut(s) | 998 |
| Kpn2I | TCCGGA | 1 cut(s) | 649 |
| Ksp22I | TGATCA | 1 cut(s) | 1620 |
| Kzo9I | GATC | 8 cut(s) | 444, 543, 626, 1041, 1336, 1471, 1491, 1620 |
| LmnI | GCTCC | 4 cut(s) | 34, 246, 569, 848 |
| Lsp1109I | GCAGC | 2 cut(s) | 191, 1000 |
| LweI | GCATC | 4 cut(s) | 94, 442, 1000, 1556 |
| MaeI | CTAG | 8 cut(s) | 126, 338, 942, 1004, 1259, 1350, 1562, 1692 |
| MaeII | ACGT | 5 cut(s) | 312, 799, 1284, 1531, 1547 |
| MaeIII | GTNAC | 7 cut(s) | 5, 317, 758, 1251, 1261, 1364, 1484 |
| MalI | GATC | 8 cut(s) | 446, 545, 628, 1043, 1338, 1473, 1493, 1622 |
| MboI | GATC | 8 cut(s) | 444, 543, 626, 1041, 1336, 1471, 1491, 1620 |
| MboII | GAAGA | 8 cut(s) | 275, 278, 308, 481, 622, 801, 1375, 1646 |
| MfeI | CAATTG | 2 cut(s) | 1058, 1156 |
| MflI | RGATCY | 1 cut(s) | 626 |
| MhlI | GDGCHC | 1 cut(s) | 564 |
| MlsI | TGGCCA | 1 cut(s) | 831 |
| MluCI | AATT | 9 cut(s) | 17, 428, 619, 658, 1058, 1081, 1156, 1212, 1436 |
| MluNI | TGGCCA | 1 cut(s) | 831 |
| Mly113I | GGCGCC | 1 cut(s) | 999 |
| MlyI | GAGTC | 5 cut(s) | 214, 314, 466, 1291, 1624 |
| MmeI | TCCRAC | 2 cut(s) | 1108, 1267 |
| Mox20I | TGGCCA | 1 cut(s) | 831 |
| MroI | TCCGGA | 1 cut(s) | 649 |
| MscI | TGGCCA | 1 cut(s) | 831 |
| MseI | TTAA | 4 cut(s) | 414, 422, 879, 1319 |
| MslI | CAYNNNNRTG | 8 cut(s) | 215, 231, 837, 990, 993, 1371, 1501, 1844 |
| Msp20I | TGGCCA | 1 cut(s) | 831 |
| MspI | CCGG | 2 cut(s) | 650, 1658 |
| MspR9I | CCNGG | 3 cut(s) | 131, 1523, 1659 |
| MunI | CAATTG | 2 cut(s) | 1058, 1156 |
| MvaI | CCWGG | 2 cut(s) | 131, 1523 |
| MvnI | CGCG | 1 cut(s) | 1714 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 188, 197, 691, 881, 1355 |
| NarI | GGCGCC | 1 cut(s) | 999 |
| NciI | CCSGG | 1 cut(s) | 1659 |
| NcoI | CCATGG | 1 cut(s) | 972 |
| NdeII | GATC | 8 cut(s) | 444, 543, 626, 1041, 1336, 1471, 1491, 1620 |
| NlaIV | GGNNCC | 5 cut(s) | 785, 844, 1000, 1556, 1812 |
| NmuCI | GTSAC | 4 cut(s) | 317, 1261, 1364, 1484 |
| NspI | RCATGY | 3 cut(s) | 1517, 1849, 1879 |
| NspV | TTCGAA | 1 cut(s) | 1589 |
| PaeI | GCATGC | 1 cut(s) | 1849 |
| PaeR7I | CTCGAG | 1 cut(s) | 119 |
| PagI | TCATGA | 2 cut(s) | 556, 1645 |
| PciI | ACATGT | 1 cut(s) | 1875 |
| PfeI | GAWTC | 7 cut(s) | 102, 115, 167, 236, 522, 653, 1805 |
| PkrI | GCNGC | 3 cut(s) | 181, 1015, 1834 |
| PleI | GAGTC | 5 cut(s) | 214, 314, 466, 1291, 1624 |
| PluTI | GGCGCC | 1 cut(s) | 1002 |
| PpsI | GAGTC | 5 cut(s) | 214, 314, 466, 1291, 1624 |
| PscI | ACATGT | 1 cut(s) | 1875 |
| Psp124BI | GAGCTC | 1 cut(s) | 564 |
| Psp6I | CCWGG | 2 cut(s) | 129, 1521 |
| PspFI | CCCAGC | 1 cut(s) | 1557 |
| PspGI | CCWGG | 2 cut(s) | 129, 1521 |
| PspN4I | GGNNCC | 5 cut(s) | 785, 844, 1000, 1556, 1812 |
| PspPI | GGNCC | 4 cut(s) | 731, 1554, 1578, 1810 |
| PsuI | RGATCY | 1 cut(s) | 626 |
| RsaI | GTAC | 3 cut(s) | 248, 1148, 1762 |
| RsaNI | GTAC | 3 cut(s) | 247, 1147, 1761 |
| RseI | CAYNNNNRTG | 8 cut(s) | 215, 231, 837, 990, 993, 1371, 1501, 1844 |
| SacI | GAGCTC | 1 cut(s) | 564 |
| SaqAI | TTAA | 4 cut(s) | 414, 422, 879, 1319 |
| SatI | GCNGC | 3 cut(s) | 180, 1014, 1833 |
| Sau3AI | GATC | 8 cut(s) | 444, 543, 626, 1041, 1336, 1471, 1491, 1620 |
| Sau96I | GGNCC | 4 cut(s) | 731, 1554, 1578, 1810 |
| SchI | GAGTC | 5 cut(s) | 214, 314, 466, 1291, 1624 |
| ScrFI | CCNGG | 3 cut(s) | 131, 1523, 1659 |
| SduI | GDGCHC | 1 cut(s) | 564 |
| SfaNI | GCATC | 4 cut(s) | 94, 442, 1000, 1556 |
| SfoI | GGCGCC | 1 cut(s) | 1000 |
| Sfr274I | CTCGAG | 1 cut(s) | 119 |
| SfuI | TTCGAA | 1 cut(s) | 1589 |
| SinI | GGWCC | 2 cut(s) | 731, 1810 |
| SlaI | CTCGAG | 1 cut(s) | 119 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 215, 231, 837, 990, 993, 1371, 1501, 1844 |
| SmlI | CTYRAG | 3 cut(s) | 89, 119, 156 |
| SmoI | CTYRAG | 3 cut(s) | 89, 119, 156 |
| SphI | GCATGC | 1 cut(s) | 1849 |
| Sse9I | AATT | 9 cut(s) | 17, 428, 619, 658, 1058, 1081, 1156, 1212, 1436 |
| SsiI | CCGC | 8 cut(s) | 79, 361, 934, 1230, 1312, 1347, 1358, 1833 |
| SspDI | GGCGCC | 1 cut(s) | 998 |
| SspMI | CTAG | 8 cut(s) | 126, 338, 942, 1004, 1259, 1350, 1562, 1692 |
| SstI | GAGCTC | 1 cut(s) | 564 |
| StyD4I | CCNGG | 3 cut(s) | 129, 1521, 1657 |
| StyI | CCWWGG | 3 cut(s) | 941, 972, 1003 |
| TaaI | ACNGT | 4 cut(s) | 145, 922, 1381, 1484 |
| TaiI | ACGT | 5 cut(s) | 315, 802, 1287, 1534, 1550 |
| TasI | AATT | 9 cut(s) | 17, 428, 619, 658, 1058, 1081, 1156, 1212, 1436 |
| TatI | WGTACW | 1 cut(s) | 1146 |
| TauI | GCSGC | 1 cut(s) | 1835 |
| TfiI | GAWTC | 7 cut(s) | 102, 115, 167, 236, 522, 653, 1805 |
| Tru1I | TTAA | 4 cut(s) | 414, 422, 879, 1319 |
| Tru9I | TTAA | 4 cut(s) | 414, 422, 879, 1319 |
| TscAI | CASTG | 3 cut(s) | 925, 1489, 1846 |
| TseFI | GTSAC | 4 cut(s) | 317, 1261, 1364, 1484 |
| TseI | GCWGC | 2 cut(s) | 179, 1013 |
| Tsp45I | GTSAC | 4 cut(s) | 317, 1261, 1364, 1484 |
| TspDTI | ATGAA | 4 cut(s) | 272, 276, 545, 590 |
| TspGWI | ACGGA | 5 cut(s) | 305, 556, 619, 796, 1629 |
| TspRI | CASTG | 3 cut(s) | 925, 1489, 1846 |
| VpaK11BI | GGWCC | 2 cut(s) | 731, 1810 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1540 |
| XapI | RAATTY | 2 cut(s) | 428, 1081 |
| XceI | RCATGY | 3 cut(s) | 1517, 1849, 1879 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 279, 944, 992 |
| XhoI | CTCGAG | 1 cut(s) | 119 |
| XmaJI | CCTAGG | 2 cut(s) | 941, 1003 |
| XmiI | GTMKAC | 1 cut(s) | 1219 |
| XspI | CTAG | 8 cut(s) | 126, 338, 942, 1004, 1259, 1350, 1562, 1692 |
| ZraI | GACGTC | 1 cut(s) | 1548 |