B-Box-type zinc finger
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 101 |
| AccBSI | CCGCTC | 1 cut(s) | 476 |
| AccI | GTMKAC | 2 cut(s) | 455, 659 |
| AccII | CGCG | 1 cut(s) | 611 |
| AccIII | TCCGGA | 1 cut(s) | 239 |
| AclWI | GGATC | 2 cut(s) | 15, 709 |
| AcoI | YGGCCR | 1 cut(s) | 720 |
| AcyI | GRCGYC | 4 cut(s) | 102, 189, 468, 614 |
| AfaI | GTAC | 2 cut(s) | 392, 484 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 179, 583 |
| AflIII | ACRYGT | 1 cut(s) | 662 |
| AjiI | CACGTC | 2 cut(s) | 127, 663 |
| AjnI | CCWGG | 1 cut(s) | 717 |
| AluBI | AGCT | 7 cut(s) | 22, 276, 360, 449, 712, 736, 775 |
| AluI | AGCT | 7 cut(s) | 22, 276, 360, 449, 712, 736, 775 |
| Alw21I | GWGCWC | 3 cut(s) | 24, 278, 362 |
| Alw26I | GTCTC | 3 cut(s) | 162, 292, 628 |
| AlwI | GGATC | 2 cut(s) | 15, 709 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 673 |
| Ama87I | CYCGRG | 2 cut(s) | 308, 770 |
| Aor13HI | TCCGGA | 1 cut(s) | 239 |
| AoxI | GGCC | 3 cut(s) | 574, 720, 767 |
| ApeKI | GCWGC | 3 cut(s) | 81, 449, 580 |
| AspLEI | GCGC | 1 cut(s) | 104 |
| AspS9I | GGNCC | 2 cut(s) | 574, 768 |
| AsuC2I | CCSGG | 3 cut(s) | 309, 310, 585 |
| AsuHPI | GGTGA | 2 cut(s) | 533, 643 |
| AvaI | CYCGRG | 2 cut(s) | 308, 770 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 474, 507 |
| BanI | GGYRCC | 1 cut(s) | 101 |
| BanII | GRGCYC | 3 cut(s) | 24, 278, 362 |
| Bbv12I | GWGCWC | 3 cut(s) | 24, 278, 362 |
| BbvI | GCAGC | 3 cut(s) | 68, 436, 567 |
| BceAI | ACGGC | 5 cut(s) | 115, 202, 330, 577, 707 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 142, 176 |
| BciT130I | CCWGG | 1 cut(s) | 719 |
| BcnI | CCSGG | 3 cut(s) | 309, 310, 585 |
| BcoDI | GTCTC | 3 cut(s) | 162, 292, 628 |
| BfaI | CTAG | 3 cut(s) | 90, 402, 776 |
| BfmI | CTRYAG | 2 cut(s) | 344, 412 |
| BfoI | RGCGCY | 1 cut(s) | 105 |
| BisI | GCNGC | 5 cut(s) | 82, 137, 450, 581, 612 |
| BlsI | GCNGC | 5 cut(s) | 83, 138, 451, 582, 613 |
| Bme1390I | CCNGG | 4 cut(s) | 309, 310, 585, 719 |
| BmeT110I | CYCGRG | 2 cut(s) | 308, 770 |
| BmgBI | CACGTC | 2 cut(s) | 127, 663 |
| BmgT120I | GGNCC | 2 cut(s) | 574, 768 |
| BmiI | GGNNCC | 2 cut(s) | 103, 647 |
| BmrFI | CCNGG | 4 cut(s) | 309, 310, 585, 719 |
| BmsI | GCATC | 1 cut(s) | 718 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 221, 253, 591, 623 |
| BpmI | CTGGAG | 1 cut(s) | 274 |
| BpuMI | CCSGG | 3 cut(s) | 309, 310, 585 |
| BsaHI | GRCGYC | 4 cut(s) | 102, 189, 468, 614 |
| BsaI | GGTCTC | 1 cut(s) | 162 |
| BsaJI | CCNNGG | 2 cut(s) | 308, 649 |
| BsaWI | WCCGGW | 1 cut(s) | 239 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 23, 38, 53, 68, 161, 191 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 179, 583 |
| Bse118I | RCCGGY | 2 cut(s) | 576, 703 |
| Bse1I | ACTGG | 1 cut(s) | 209 |
| Bse3DI | GCAATG | 1 cut(s) | 302 |
| BseAI | TCCGGA | 1 cut(s) | 239 |
| BseBI | CCWGG | 1 cut(s) | 719 |
| BseDI | CCNNGG | 2 cut(s) | 308, 649 |
| BseGI | GGATG | 2 cut(s) | 215, 519 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 179, 583 |
| BseMI | GCAATG | 1 cut(s) | 302 |
| BseMII | CTCAG | 1 cut(s) | 665 |
| BseNI | ACTGG | 1 cut(s) | 209 |
| BseRI | GAGGAG | 4 cut(s) | 442, 701, 772, 794 |
| BseXI | GCAGC | 3 cut(s) | 68, 436, 567 |
| BseYI | CCCAGC | 2 cut(s) | 508, 786 |
| BsgI | GTGCAG | 1 cut(s) | 455 |
| Bsh1236I | CGCG | 1 cut(s) | 611 |
| BshFI | GGCC | 3 cut(s) | 576, 722, 769 |
| BshNI | GGYRCC | 1 cut(s) | 101 |
| BsiHKAI | GWGCWC | 3 cut(s) | 24, 278, 362 |
| BsiHKCI | CYCGRG | 2 cut(s) | 308, 770 |
| BsiWI | CGTACG | 1 cut(s) | 390 |
| BslFI | GGGAC | 2 cut(s) | 176, 325 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 179, 583 |
| BsmAI | GTCTC | 3 cut(s) | 162, 292, 628 |
| BsmBI | CGTCTC | 1 cut(s) | 292 |
| BsmFI | GGGAC | 2 cut(s) | 176, 325 |
| BsnI | GGCC | 3 cut(s) | 576, 722, 769 |
| Bso31I | GGTCTC | 1 cut(s) | 162 |
| BsoBI | CYCGRG | 2 cut(s) | 308, 770 |
| Bsp1286I | GDGCHC | 3 cut(s) | 24, 278, 362 |
| Bsp13I | TCCGGA | 1 cut(s) | 239 |
| Bsp143I | GATC | 4 cut(s) | 7, 174, 350, 714 |
| BspANI | GGCC | 3 cut(s) | 576, 722, 769 |
| BspCNI | CTCAG | 1 cut(s) | 666 |
| BspEI | TCCGGA | 1 cut(s) | 239 |
| BspFNI | CGCG | 1 cut(s) | 611 |
| BspLI | GGNNCC | 2 cut(s) | 103, 647 |
| BspMAI | CTGCAG | 1 cut(s) | 348 |
| BspPI | GGATC | 2 cut(s) | 15, 709 |
| BspT107I | GGYRCC | 1 cut(s) | 101 |
| BspTNI | GGTCTC | 1 cut(s) | 162 |
| BsrBI | CCGCTC | 1 cut(s) | 476 |
| BsrDI | GCAATG | 1 cut(s) | 302 |
| BsrFI | RCCGGY | 2 cut(s) | 576, 703 |
| BsrI | ACTGG | 1 cut(s) | 209 |
| BssAI | RCCGGY | 2 cut(s) | 576, 703 |
| BssECI | CCNNGG | 2 cut(s) | 308, 649 |
| BssMI | GATC | 4 cut(s) | 7, 174, 350, 714 |
| BssNI | GRCGYC | 4 cut(s) | 102, 189, 468, 614 |
| Bst2UI | CCWGG | 1 cut(s) | 719 |
| Bst4CI | ACNGT | 1 cut(s) | 754 |
| Bst6I | CTCTTC | 1 cut(s) | 419 |
| BstACI | GRCGYC | 4 cut(s) | 102, 189, 468, 614 |
| BstDEI | CTNAG | 1 cut(s) | 674 |
| BstF5I | GGATG | 2 cut(s) | 215, 519 |
| BstFNI | CGCG | 1 cut(s) | 611 |
| BstH2I | RGCGCY | 1 cut(s) | 105 |
| BstHHI | GCGC | 1 cut(s) | 104 |
| BstKTI | GATC | 4 cut(s) | 10, 177, 353, 717 |
| BstMAI | GTCTC | 3 cut(s) | 162, 292, 628 |
| BstMBI | GATC | 4 cut(s) | 7, 174, 350, 714 |
| BstNI | CCWGG | 1 cut(s) | 719 |
| BstNSI | RCATGY | 1 cut(s) | 557 |
| BstSCI | CCNGG | 4 cut(s) | 307, 308, 583, 717 |
| BstSFI | CTRYAG | 2 cut(s) | 344, 412 |
| BstUI | CGCG | 1 cut(s) | 611 |
| BstV1I | GCAGC | 3 cut(s) | 68, 436, 567 |
| BsuRI | GGCC | 3 cut(s) | 576, 722, 769 |
| BtrI | CACGTC | 2 cut(s) | 127, 663 |
| BtsCI | GGATG | 2 cut(s) | 215, 519 |
| BtsIMutI | CAGTG | 2 cut(s) | 202, 759 |
| CaiI | CAGNNNCTG | 1 cut(s) | 673 |
| CfoI | GCGC | 1 cut(s) | 104 |
| Cfr10I | RCCGGY | 2 cut(s) | 576, 703 |
| Cfr13I | GGNCC | 2 cut(s) | 574, 768 |
| Cfr9I | CCCGGG | 1 cut(s) | 308 |
| CseI | GACGC | 5 cut(s) | 178, 274, 441, 476, 603 |
| Csp6I | GTAC | 2 cut(s) | 391, 483 |
| CviAII | CATG | 1 cut(s) | 554 |
| CviQI | GTAC | 2 cut(s) | 391, 483 |
| DdeI | CTNAG | 1 cut(s) | 674 |
| DinI | GGCGCC | 1 cut(s) | 103 |
| DpnI | GATC | 4 cut(s) | 9, 176, 352, 716 |
| DpnII | GATC | 4 cut(s) | 7, 174, 350, 714 |
| EaeI | YGGCCR | 1 cut(s) | 720 |
| Eam1104I | CTCTTC | 1 cut(s) | 419 |
| EarI | CTCTTC | 1 cut(s) | 419 |
| EciI | GGCGGA | 2 cut(s) | 52, 119 |
| Ecl136II | GAGCTC | 3 cut(s) | 22, 276, 360 |
| Eco24I | GRGCYC | 3 cut(s) | 24, 278, 362 |
| Eco31I | GGTCTC | 1 cut(s) | 162 |
| Eco32I | GATATC | 1 cut(s) | 693 |
| Eco53kI | GAGCTC | 3 cut(s) | 22, 276, 360 |
| Eco88I | CYCGRG | 2 cut(s) | 308, 770 |
| EcoICRI | GAGCTC | 3 cut(s) | 22, 276, 360 |
| EcoRII | CCWGG | 1 cut(s) | 717 |
| EcoRV | GATATC | 1 cut(s) | 693 |
| EcoT38I | GRGCYC | 3 cut(s) | 24, 278, 362 |
| EgeI | GGCGCC | 1 cut(s) | 103 |
| EheI | GGCGCC | 1 cut(s) | 103 |
| Esp3I | CGTCTC | 1 cut(s) | 292 |
| FaeI | CATG | 1 cut(s) | 557 |
| FaiI | YATR | 1 cut(s) | 555 |
| FaqI | GGGAC | 2 cut(s) | 176, 325 |
| FatI | CATG | 1 cut(s) | 553 |
| FauI | CCCGC | 1 cut(s) | 635 |
| FblI | GTMKAC | 2 cut(s) | 455, 659 |
| Fnu4HI | GCNGC | 5 cut(s) | 82, 137, 450, 581, 612 |
| FokI | GGATG | 2 cut(s) | 202, 526 |
| FriOI | GRGCYC | 3 cut(s) | 24, 278, 362 |
| Fsp4HI | GCNGC | 5 cut(s) | 82, 137, 450, 581, 612 |
| FspBI | CTAG | 3 cut(s) | 90, 402, 776 |
| GlaI | GCGC | 1 cut(s) | 103 |
| GluI | GCNGC | 5 cut(s) | 82, 137, 450, 581, 612 |
| GsaI | CCCAGC | 2 cut(s) | 512, 790 |
| GsuI | CTGGAG | 1 cut(s) | 274 |
| HaeII | RGCGCY | 1 cut(s) | 105 |
| HaeIII | GGCC | 3 cut(s) | 576, 722, 769 |
| HgaI | GACGC | 5 cut(s) | 178, 274, 441, 476, 603 |
| HhaI | GCGC | 1 cut(s) | 104 |
| Hin1I | GRCGYC | 4 cut(s) | 102, 189, 468, 614 |
| Hin1II | CATG | 1 cut(s) | 557 |
| Hin6I | GCGC | 1 cut(s) | 102 |
| HinP1I | GCGC | 1 cut(s) | 102 |
| HincII | GTYRAC | 2 cut(s) | 456, 660 |
| HindII | GTYRAC | 2 cut(s) | 456, 660 |
| HinfI | GANTC | 8 cut(s) | 59, 86, 251, 299, 405, 524, 636, 670 |
| HphI | GGTGA | 2 cut(s) | 533, 643 |
| Hpy166II | GTNNAC | 4 cut(s) | 97, 420, 456, 660 |
| Hpy188I | TCNGA | 4 cut(s) | 58, 669, 675, 740 |
| Hpy188III | TCNNGA | 2 cut(s) | 240, 696 |
| Hpy8I | GTNNAC | 4 cut(s) | 97, 420, 456, 660 |
| HpyAV | CCTTC | 2 cut(s) | 76, 672 |
| HpyCH4III | ACNGT | 1 cut(s) | 754 |
| HpyCH4IV | ACGT | 3 cut(s) | 126, 393, 662 |
| HpyCH4V | TGCA | 6 cut(s) | 27, 153, 346, 436, 501, 553 |
| HpyF3I | CTNAG | 1 cut(s) | 674 |
| HpySE526I | ACGT | 3 cut(s) | 126, 393, 662 |
| Hsp92I | GRCGYC | 4 cut(s) | 102, 189, 468, 614 |
| Hsp92II | CATG | 1 cut(s) | 557 |
| HspAI | GCGC | 1 cut(s) | 102 |
| KasI | GGCGCC | 1 cut(s) | 101 |
| Kpn2I | TCCGGA | 1 cut(s) | 239 |
| KroI | GCCGGC | 2 cut(s) | 576, 703 |
| KroNI | GCCGGC | 2 cut(s) | 578, 705 |
| Kzo9I | GATC | 4 cut(s) | 7, 174, 350, 714 |
| LmnI | GCTCC | 2 cut(s) | 149, 357 |
| Lsp1109I | GCAGC | 3 cut(s) | 68, 436, 567 |
| LweI | GCATC | 1 cut(s) | 718 |
| MaeI | CTAG | 3 cut(s) | 90, 402, 776 |
| MaeII | ACGT | 3 cut(s) | 126, 393, 662 |
| MaeIII | GTNAC | 1 cut(s) | 364 |
| MalI | GATC | 4 cut(s) | 9, 176, 352, 716 |
| MbiI | CCGCTC | 1 cut(s) | 476 |
| MboI | GATC | 4 cut(s) | 7, 174, 350, 714 |
| MboII | GAAGA | 1 cut(s) | 436 |
| MfeI | CAATTG | 1 cut(s) | 148 |
| MhlI | GDGCHC | 3 cut(s) | 24, 278, 362 |
| MluCI | AATT | 2 cut(s) | 148, 493 |
| Mly113I | GGCGCC | 1 cut(s) | 102 |
| MlyI | GAGTC | 3 cut(s) | 53, 80, 630 |
| MmeI | TCCRAC | 1 cut(s) | 81 |
| MroI | TCCGGA | 1 cut(s) | 239 |
| MroNI | GCCGGC | 2 cut(s) | 576, 703 |
| MspA1I | CMGCKG | 2 cut(s) | 81, 136 |
| MspR9I | CCNGG | 4 cut(s) | 309, 310, 585, 719 |
| MunI | CAATTG | 1 cut(s) | 148 |
| MvaI | CCWGG | 1 cut(s) | 719 |
| MvnI | CGCG | 1 cut(s) | 611 |
| NaeI | GCCGGC | 2 cut(s) | 578, 705 |
| NarI | GGCGCC | 1 cut(s) | 102 |
| NciI | CCSGG | 3 cut(s) | 309, 310, 585 |
| NdeII | GATC | 4 cut(s) | 7, 174, 350, 714 |
| NgoMIV | GCCGGC | 2 cut(s) | 576, 703 |
| NlaIII | CATG | 1 cut(s) | 557 |
| NlaIV | GGNNCC | 2 cut(s) | 103, 647 |
| NmeAIII | GCCGAG | 1 cut(s) | 257 |
| NspI | RCATGY | 1 cut(s) | 557 |
| PaeI | GCATGC | 1 cut(s) | 557 |
| PcsI | WCGNNNNNNNCGW | 7 cut(s) | 123, 260, 266, 269, 278, 320, 611 |
| PdiI | GCCGGC | 2 cut(s) | 578, 705 |
| PfeI | GAWTC | 5 cut(s) | 251, 299, 405, 524, 670 |
| Pfl23II | CGTACG | 1 cut(s) | 390 |
| PflFI | GACNNNGTC | 1 cut(s) | 188 |
| PkrI | GCNGC | 5 cut(s) | 83, 138, 451, 582, 613 |
| PleI | GAGTC | 3 cut(s) | 53, 80, 630 |
| PluTI | GGCGCC | 1 cut(s) | 105 |
| PpsI | GAGTC | 3 cut(s) | 53, 80, 630 |
| Psp124BI | GAGCTC | 3 cut(s) | 24, 278, 362 |
| Psp6I | CCWGG | 1 cut(s) | 717 |
| PspFI | CCCAGC | 2 cut(s) | 508, 786 |
| PspGI | CCWGG | 1 cut(s) | 717 |
| PspLI | CGTACG | 1 cut(s) | 390 |
| PspN4I | GGNNCC | 2 cut(s) | 103, 647 |
| PspPI | GGNCC | 2 cut(s) | 574, 768 |
| PstI | CTGCAG | 1 cut(s) | 348 |
| PstNI | CAGNNNCTG | 1 cut(s) | 673 |
| PsyI | GACNNNGTC | 1 cut(s) | 188 |
| RsaI | GTAC | 2 cut(s) | 392, 484 |
| RsaNI | GTAC | 2 cut(s) | 391, 483 |
| SacI | GAGCTC | 3 cut(s) | 24, 278, 362 |
| SalI | GTCGAC | 2 cut(s) | 454, 658 |
| SatI | GCNGC | 5 cut(s) | 82, 137, 450, 581, 612 |
| Sau3AI | GATC | 4 cut(s) | 7, 174, 350, 714 |
| Sau96I | GGNCC | 2 cut(s) | 574, 768 |
| SchI | GAGTC | 3 cut(s) | 53, 80, 630 |
| ScrFI | CCNGG | 4 cut(s) | 309, 310, 585, 719 |
| SduI | GDGCHC | 3 cut(s) | 24, 278, 362 |
| SfaNI | GCATC | 1 cut(s) | 718 |
| SfcI | CTRYAG | 2 cut(s) | 344, 412 |
| SfoI | GGCGCC | 1 cut(s) | 103 |
| SgrDI | CGTCGACG | 1 cut(s) | 454 |
| SmaI | CCCGGG | 1 cut(s) | 310 |
| SphI | GCATGC | 1 cut(s) | 557 |
| Sse9I | AATT | 2 cut(s) | 148, 493 |
| SspDI | GGCGCC | 1 cut(s) | 101 |
| SspMI | CTAG | 3 cut(s) | 90, 402, 776 |
| SstI | GAGCTC | 3 cut(s) | 24, 278, 362 |
| StyD4I | CCNGG | 4 cut(s) | 307, 308, 583, 717 |
| TaaI | ACNGT | 1 cut(s) | 754 |
| TaiI | ACGT | 3 cut(s) | 129, 396, 665 |
| TaqI | TCGA | 3 cut(s) | 272, 455, 659 |
| TasI | AATT | 2 cut(s) | 148, 493 |
| TauI | GCSGC | 2 cut(s) | 139, 614 |
| TfiI | GAWTC | 5 cut(s) | 251, 299, 405, 524, 670 |
| TscAI | CASTG | 2 cut(s) | 209, 759 |
| TseI | GCWGC | 3 cut(s) | 81, 449, 580 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspMI | CCCGGG | 1 cut(s) | 308 |
| TspRI | CASTG | 2 cut(s) | 209, 759 |
| Tth111I | GACNNNGTC | 1 cut(s) | 188 |
| XceI | RCATGY | 1 cut(s) | 557 |
| XmaI | CCCGGG | 1 cut(s) | 308 |
| XmiI | GTMKAC | 2 cut(s) | 455, 659 |
| XspI | CTAG | 3 cut(s) | 90, 402, 776 |