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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 270 |
| Acc36I | ACCTGC | 1 cut(s) | 540 |
| AccB1I | GGYRCC | 2 cut(s) | 637, 764 |
| AccBSI | CCGCTC | 1 cut(s) | 682 |
| AccII | CGCG | 1 cut(s) | 59 |
| AccIII | TCCGGA | 1 cut(s) | 538 |
| AciI | CCGC | 4 cut(s) | 411, 450, 584, 682 |
| AclWI | GGATC | 6 cut(s) | 75, 88, 272, 624, 856, 869 |
| AcoI | YGGCCR | 4 cut(s) | 273, 431, 683, 831 |
| AcsI | RAATTY | 1 cut(s) | 1187 |
| AcuI | CTGAAG | 2 cut(s) | 489, 719 |
| AcyI | GRCGYC | 1 cut(s) | 267 |
| AfaI | GTAC | 3 cut(s) | 871, 1013, 1143 |
| AfeI | AGCGCT | 2 cut(s) | 498, 696 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 74, 169, 202, 538, 563, 840, 1021, 1440 |
| AflII | CTTAAG | 1 cut(s) | 848 |
| AgeI | ACCGGT | 4 cut(s) | 374, 563, 761, 803 |
| AgsI | TTSAA | 7 cut(s) | 334, 464, 570, 878, 926, 1135, 1158 |
| AjiI | CACGTC | 3 cut(s) | 711, 753, 895 |
| AjnI | CCWGG | 2 cut(s) | 239, 476 |
| AluBI | AGCT | 6 cut(s) | 574, 914, 938, 959, 1321, 1343 |
| AluI | AGCT | 6 cut(s) | 574, 914, 938, 959, 1321, 1343 |
| Alw21I | GWGCWC | 1 cut(s) | 177 |
| Alw26I | GTCTC | 4 cut(s) | 230, 274, 1220, 1255 |
| AlwI | GGATC | 6 cut(s) | 75, 88, 272, 624, 856, 869 |
| Ama87I | CYCGRG | 2 cut(s) | 702, 1052 |
| Aor13HI | TCCGGA | 1 cut(s) | 538 |
| Aor51HI | AGCGCT | 2 cut(s) | 498, 696 |
| AoxI | GGCC | 6 cut(s) | 273, 423, 431, 513, 683, 831 |
| ApeKI | GCWGC | 4 cut(s) | 452, 494, 914, 917 |
| ApoI | RAATTY | 1 cut(s) | 1187 |
| AsiGI | ACCGGT | 4 cut(s) | 374, 563, 761, 803 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 25 |
| AspLEI | GCGC | 4 cut(s) | 59, 499, 697, 1433 |
| AspS9I | GGNCC | 1 cut(s) | 721 |
| AsuC2I | CCSGG | 2 cut(s) | 75, 656 |
| AsuHPI | GGTGA | 1 cut(s) | 570 |
| AvaI | CYCGRG | 2 cut(s) | 702, 1052 |
| AvaII | GGWCC | 1 cut(s) | 721 |
| BamHI | GGATCC | 2 cut(s) | 80, 861 |
| BanI | GGYRCC | 2 cut(s) | 637, 764 |
| BauI | CACGAG | 2 cut(s) | 10, 1388 |
| BbsI | GAAGAC | 1 cut(s) | 1032 |
| Bbv12I | GWGCWC | 1 cut(s) | 177 |
| BbvI | GCAGC | 4 cut(s) | 439, 506, 901, 904 |
| BccI | CCATC | 7 cut(s) | 138, 159, 733, 851, 974, 1101, 1177 |
| BceAI | ACGGC | 2 cut(s) | 143, 651 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1100, 1134 |
| BciT130I | CCWGG | 2 cut(s) | 241, 478 |
| BclI | TGATCA | 1 cut(s) | 312 |
| BcnI | CCSGG | 2 cut(s) | 75, 656 |
| BcoDI | GTCTC | 4 cut(s) | 230, 274, 1220, 1255 |
| BfaI | CTAG | 4 cut(s) | 54, 819, 1296, 1383 |
| BfmI | CTRYAG | 1 cut(s) | 219 |
| BfoI | RGCGCY | 2 cut(s) | 500, 698 |
| BfrI | CTTAAG | 1 cut(s) | 848 |
| BfuAI | ACCTGC | 1 cut(s) | 540 |
| BglII | AGATCT | 1 cut(s) | 466 |
| BisI | GCNGC | 5 cut(s) | 453, 495, 683, 915, 918 |
| BlsI | GCNGC | 5 cut(s) | 454, 496, 684, 916, 919 |
| Bme1390I | CCNGG | 4 cut(s) | 75, 241, 478, 656 |
| Bme18I | GGWCC | 1 cut(s) | 721 |
| BmeT110I | CYCGRG | 2 cut(s) | 702, 1052 |
| BmgBI | CACGTC | 3 cut(s) | 711, 753, 895 |
| BmgT120I | GGNCC | 1 cut(s) | 721 |
| BmiI | GGNNCC | 7 cut(s) | 82, 639, 660, 723, 766, 863, 1396 |
| BmrFI | CCNGG | 4 cut(s) | 75, 241, 478, 656 |
| BmsI | GCATC | 7 cut(s) | 405, 595, 748, 853, 1289, 1311, 1318 |
| BpiI | GAAGAC | 1 cut(s) | 1032 |
| BpmI | CTGGAG | 4 cut(s) | 101, 460, 776, 986 |
| BpuMI | CCSGG | 2 cut(s) | 75, 656 |
| Bsa29I | ATCGAT | 1 cut(s) | 1279 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1220 |
| BsaHI | GRCGYC | 1 cut(s) | 267 |
| BsaI | GGTCTC | 1 cut(s) | 230 |
| BsaJI | CCNNGG | 4 cut(s) | 434, 633, 779, 1409 |
| BsaWI | WCCGGW | 8 cut(s) | 107, 195, 374, 538, 563, 640, 761, 803 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 405, 435 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 74, 169, 202, 538, 563, 840, 1021, 1440 |
| Bse118I | RCCGGY | 5 cut(s) | 374, 490, 563, 761, 803 |
| Bse1I | ACTGG | 1 cut(s) | 793 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1220 |
| BseAI | TCCGGA | 1 cut(s) | 538 |
| BseBI | CCWGG | 2 cut(s) | 241, 478 |
| BseCI | ATCGAT | 1 cut(s) | 1279 |
| BseDI | CCNNGG | 4 cut(s) | 434, 633, 779, 1409 |
| BseGI | GGATG | 3 cut(s) | 315, 593, 673 |
| BseJI | GATNNNNATC | 1 cut(s) | 1220 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 74, 169, 202, 538, 563, 840, 1021, 1440 |
| BseMII | CTCAG | 1 cut(s) | 857 |
| BseNI | ACTGG | 1 cut(s) | 793 |
| BseRI | GAGGAG | 4 cut(s) | 290, 293, 296, 894 |
| BseX3I | CGGCCG | 1 cut(s) | 273 |
| BseXI | GCAGC | 4 cut(s) | 439, 506, 901, 904 |
| Bsh1236I | CGCG | 1 cut(s) | 59 |
| Bsh1285I | CGRYCG | 2 cut(s) | 276, 804 |
| BshFI | GGCC | 6 cut(s) | 275, 425, 433, 515, 685, 833 |
| BshNI | GGYRCC | 2 cut(s) | 637, 764 |
| BshTI | ACCGGT | 4 cut(s) | 374, 563, 761, 803 |
| BshVI | ATCGAT | 1 cut(s) | 1279 |
| BsiEI | CGRYCG | 2 cut(s) | 276, 804 |
| BsiHKAI | GWGCWC | 1 cut(s) | 177 |
| BsiHKCI | CYCGRG | 2 cut(s) | 702, 1052 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 74, 169, 202, 538, 563, 840, 1021, 1440 |
| BsmAI | GTCTC | 4 cut(s) | 230, 274, 1220, 1255 |
| BsmBI | CGTCTC | 3 cut(s) | 274, 1220, 1255 |
| BsnI | GGCC | 6 cut(s) | 275, 425, 433, 515, 685, 833 |
| Bso31I | GGTCTC | 1 cut(s) | 230 |
| BsoBI | CYCGRG | 2 cut(s) | 702, 1052 |
| Bsp1286I | GDGCHC | 1 cut(s) | 177 |
| Bsp13I | TCCGGA | 1 cut(s) | 538 |
| Bsp143I | GATC | 9 cut(s) | 80, 207, 277, 312, 361, 466, 629, 861, 1221 |
| Bsp19I | CCATGG | 1 cut(s) | 434 |
| BspACI | CCGC | 4 cut(s) | 411, 450, 584, 682 |
| BspANI | GGCC | 6 cut(s) | 275, 425, 433, 515, 685, 833 |
| BspCNI | CTCAG | 1 cut(s) | 858 |
| BspDI | ATCGAT | 1 cut(s) | 1279 |
| BspEI | TCCGGA | 1 cut(s) | 538 |
| BspFNI | CGCG | 1 cut(s) | 59 |
| BspHI | TCATGA | 2 cut(s) | 975, 1315 |
| BspLI | GGNNCC | 7 cut(s) | 82, 639, 660, 723, 766, 863, 1396 |
| BspMI | ACCTGC | 1 cut(s) | 540 |
| BspPI | GGATC | 6 cut(s) | 75, 88, 272, 624, 856, 869 |
| BspT107I | GGYRCC | 2 cut(s) | 637, 764 |
| BspTI | CTTAAG | 1 cut(s) | 848 |
| BspTNI | GGTCTC | 1 cut(s) | 230 |
| BsrBI | CCGCTC | 1 cut(s) | 682 |
| BsrFI | RCCGGY | 5 cut(s) | 374, 490, 563, 761, 803 |
| BsrI | ACTGG | 1 cut(s) | 793 |
| BssAI | RCCGGY | 5 cut(s) | 374, 490, 563, 761, 803 |
| BssECI | CCNNGG | 4 cut(s) | 434, 633, 779, 1409 |
| BssMI | GATC | 9 cut(s) | 80, 207, 277, 312, 361, 466, 629, 861, 1221 |
| BssNI | GRCGYC | 1 cut(s) | 267 |
| BssSI | CACGAG | 2 cut(s) | 10, 1388 |
| BssT1I | CCWWGG | 1 cut(s) | 434 |
| Bst2BI | CACGAG | 2 cut(s) | 10, 1388 |
| Bst2UI | CCWGG | 2 cut(s) | 241, 478 |
| Bst4CI | ACNGT | 3 cut(s) | 223, 407, 718 |
| BstACI | GRCGYC | 1 cut(s) | 267 |
| BstAFI | CTTAAG | 1 cut(s) | 848 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 764 |
| BstC8I | GCNNGC | 1 cut(s) | 747 |
| BstDEI | CTNAG | 3 cut(s) | 866, 939, 1096 |
| BstDSI | CCRYGG | 3 cut(s) | 434, 633, 1409 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1019, 1438 |
| BstF5I | GGATG | 3 cut(s) | 315, 593, 673 |
| BstFNI | CGCG | 1 cut(s) | 59 |
| BstH2I | RGCGCY | 2 cut(s) | 500, 698 |
| BstHHI | GCGC | 4 cut(s) | 59, 499, 697, 1433 |
| BstKTI | GATC | 9 cut(s) | 83, 210, 280, 315, 364, 469, 632, 864, 1224 |
| BstMAI | GTCTC | 4 cut(s) | 230, 274, 1220, 1255 |
| BstMBI | GATC | 9 cut(s) | 80, 207, 277, 312, 361, 466, 629, 861, 1221 |
| BstMCI | CGRYCG | 2 cut(s) | 276, 804 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 736, 755, 764, 773, 926, 935, 956 |
| BstNI | CCWGG | 2 cut(s) | 241, 478 |
| BstSCI | CCNGG | 4 cut(s) | 73, 239, 476, 654 |
| BstSFI | CTRYAG | 1 cut(s) | 219 |
| BstUI | CGCG | 1 cut(s) | 59 |
| BstV1I | GCAGC | 4 cut(s) | 439, 506, 901, 904 |
| BstV2I | GAAGAC | 1 cut(s) | 1032 |
| BstX2I | RGATCY | 4 cut(s) | 80, 466, 629, 861 |
| BstYI | RGATCY | 4 cut(s) | 80, 466, 629, 861 |
| BstZI | CGGCCG | 1 cut(s) | 273 |
| Bsu15I | ATCGAT | 1 cut(s) | 1279 |
| BsuRI | GGCC | 6 cut(s) | 275, 425, 433, 515, 685, 833 |
| BsuTUI | ATCGAT | 1 cut(s) | 1279 |
| BtgI | CCRYGG | 3 cut(s) | 434, 633, 1409 |
| BtgZI | GCGATG | 2 cut(s) | 382, 711 |
| BtrI | CACGTC | 3 cut(s) | 711, 753, 895 |
| BtsCI | GGATG | 3 cut(s) | 315, 593, 673 |
| BtsIMutI | CAGTG | 2 cut(s) | 723, 1206 |
| BveI | ACCTGC | 1 cut(s) | 540 |
| Cac8I | GCNNGC | 1 cut(s) | 747 |
| CciI | TCATGA | 2 cut(s) | 975, 1315 |
| CfoI | GCGC | 4 cut(s) | 59, 499, 697, 1433 |
| Cfr10I | RCCGGY | 5 cut(s) | 374, 490, 563, 761, 803 |
| Cfr13I | GGNCC | 1 cut(s) | 721 |
| ClaI | ATCGAT | 1 cut(s) | 1279 |
| CseI | GACGC | 2 cut(s) | 1004, 1453 |
| CsiI | ACCWGGT | 1 cut(s) | 239 |
| Csp6I | GTAC | 3 cut(s) | 870, 1012, 1142 |
| CspAI | ACCGGT | 4 cut(s) | 374, 563, 761, 803 |
| CviAII | CATG | 6 cut(s) | 435, 976, 988, 1076, 1316, 1333 |
| CviQI | GTAC | 3 cut(s) | 870, 1012, 1142 |
| DdeI | CTNAG | 3 cut(s) | 866, 939, 1096 |
| DpnI | GATC | 9 cut(s) | 82, 209, 279, 314, 363, 468, 631, 863, 1223 |
| DpnII | GATC | 9 cut(s) | 80, 207, 277, 312, 361, 466, 629, 861, 1221 |
| EaeI | YGGCCR | 4 cut(s) | 273, 431, 683, 831 |
| EagI | CGGCCG | 1 cut(s) | 273 |
| EciI | GGCGGA | 1 cut(s) | 426 |
| EclXI | CGGCCG | 1 cut(s) | 273 |
| Eco130I | CCWWGG | 1 cut(s) | 434 |
| Eco31I | GGTCTC | 1 cut(s) | 230 |
| Eco47I | GGWCC | 1 cut(s) | 721 |
| Eco47III | AGCGCT | 2 cut(s) | 498, 696 |
| Eco52I | CGGCCG | 1 cut(s) | 273 |
| Eco57I | CTGAAG | 2 cut(s) | 489, 719 |
| Eco88I | CYCGRG | 2 cut(s) | 702, 1052 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1019, 1438 |
| EcoRI | GAATTC | 1 cut(s) | 1187 |
| EcoRII | CCWGG | 2 cut(s) | 239, 476 |
| EcoT14I | CCWWGG | 1 cut(s) | 434 |
| EcoT22I | ATGCAT | 1 cut(s) | 1304 |
| ErhI | CCWWGG | 1 cut(s) | 434 |
| Esp3I | CGTCTC | 3 cut(s) | 274, 1220, 1255 |
| FaeI | CATG | 6 cut(s) | 438, 979, 991, 1079, 1319, 1336 |
| FatI | CATG | 6 cut(s) | 434, 975, 987, 1075, 1315, 1332 |
| FbaI | TGATCA | 1 cut(s) | 312 |
| Fnu4HI | GCNGC | 5 cut(s) | 453, 495, 683, 915, 918 |
| FokI | GGATG | 3 cut(s) | 302, 580, 660 |
| Fsp4HI | GCNGC | 5 cut(s) | 453, 495, 683, 915, 918 |
| FspBI | CTAG | 4 cut(s) | 54, 819, 1296, 1383 |
| GlaI | GCGC | 4 cut(s) | 58, 498, 696, 1432 |
| GluI | GCNGC | 5 cut(s) | 453, 495, 683, 915, 918 |
| GsuI | CTGGAG | 4 cut(s) | 101, 460, 776, 986 |
| HaeII | RGCGCY | 2 cut(s) | 500, 698 |
| HaeIII | GGCC | 6 cut(s) | 275, 425, 433, 515, 685, 833 |
| HgaI | GACGC | 2 cut(s) | 1004, 1453 |
| HhaI | GCGC | 4 cut(s) | 59, 499, 697, 1433 |
| Hin1I | GRCGYC | 1 cut(s) | 267 |
| Hin1II | CATG | 6 cut(s) | 438, 979, 991, 1079, 1319, 1336 |
| Hin6I | GCGC | 4 cut(s) | 57, 497, 695, 1431 |
| HinP1I | GCGC | 4 cut(s) | 57, 497, 695, 1431 |
| HincII | GTYRAC | 4 cut(s) | 714, 786, 798, 809 |
| HindII | GTYRAC | 4 cut(s) | 714, 786, 798, 809 |
| HindIII | AAGCTT | 1 cut(s) | 572 |
| HinfI | GANTC | 8 cut(s) | 15, 104, 295, 481, 1079, 1231, 1386, 1415 |
| HphI | GGTGA | 1 cut(s) | 570 |
| Hpy166II | GTNNAC | 6 cut(s) | 253, 714, 721, 786, 798, 809 |
| Hpy188I | TCNGA | 6 cut(s) | 20, 85, 212, 247, 508, 591 |
| Hpy8I | GTNNAC | 6 cut(s) | 253, 714, 721, 786, 798, 809 |
| Hpy99I | CGWCG | 2 cut(s) | 182, 269 |
| HpyAV | CCTTC | 7 cut(s) | 98, 291, 328, 436, 513, 1127, 1252 |
| HpyCH4III | ACNGT | 3 cut(s) | 223, 407, 718 |
| HpyCH4IV | ACGT | 5 cut(s) | 267, 710, 752, 894, 1071 |
| HpyCH4V | TGCA | 3 cut(s) | 396, 1256, 1302 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 736, 755, 764, 773, 926, 935, 956 |
| HpyF3I | CTNAG | 3 cut(s) | 866, 939, 1096 |
| HpySE526I | ACGT | 5 cut(s) | 267, 710, 752, 894, 1071 |
| Hsp92I | GRCGYC | 1 cut(s) | 267 |
| Hsp92II | CATG | 6 cut(s) | 438, 979, 991, 1079, 1319, 1336 |
| HspAI | GCGC | 4 cut(s) | 57, 497, 695, 1431 |
| Kpn2I | TCCGGA | 1 cut(s) | 538 |
| Ksp22I | TGATCA | 1 cut(s) | 312 |
| Kzo9I | GATC | 9 cut(s) | 80, 207, 277, 312, 361, 466, 629, 861, 1221 |
| LmnI | GCTCC | 2 cut(s) | 212, 1451 |
| Lsp1109I | GCAGC | 4 cut(s) | 439, 506, 901, 904 |
| LweI | GCATC | 7 cut(s) | 405, 595, 748, 853, 1289, 1311, 1318 |
| MabI | ACCWGGT | 1 cut(s) | 239 |
| MaeI | CTAG | 4 cut(s) | 54, 819, 1296, 1383 |
| MaeII | ACGT | 5 cut(s) | 267, 710, 752, 894, 1071 |
| MaeIII | GTNAC | 1 cut(s) | 125 |
| MalI | GATC | 9 cut(s) | 82, 209, 279, 314, 363, 468, 631, 863, 1223 |
| MbiI | CCGCTC | 1 cut(s) | 682 |
| MboI | GATC | 9 cut(s) | 80, 207, 277, 312, 361, 466, 629, 861, 1221 |
| MboII | GAAGA | 4 cut(s) | 21, 476, 1037, 1381 |
| MflI | RGATCY | 4 cut(s) | 80, 466, 629, 861 |
| MhlI | GDGCHC | 1 cut(s) | 177 |
| MluCI | AATT | 8 cut(s) | 340, 647, 835, 873, 1153, 1187, 1323, 1420 |
| MlyI | GAGTC | 4 cut(s) | 490, 1225, 1380, 1424 |
| MmeI | TCCRAC | 2 cut(s) | 108, 584 |
| Mph1103I | ATGCAT | 1 cut(s) | 1304 |
| MroI | TCCGGA | 1 cut(s) | 538 |
| MroXI | GAANNNNTTC | 1 cut(s) | 25 |
| MseI | TTAA | 1 cut(s) | 849 |
| MslI | CAYNNNNRTG | 3 cut(s) | 974, 990, 1364 |
| MspA1I | CMGCKG | 1 cut(s) | 452 |
| MspCI | CTTAAG | 1 cut(s) | 848 |
| MspR9I | CCNGG | 4 cut(s) | 75, 241, 478, 656 |
| MvaI | CCWGG | 2 cut(s) | 241, 478 |
| MvnI | CGCG | 1 cut(s) | 59 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 736, 755, 764, 773, 926, 935, 956 |
| NciI | CCSGG | 2 cut(s) | 75, 656 |
| NcoI | CCATGG | 1 cut(s) | 434 |
| NdeII | GATC | 9 cut(s) | 80, 207, 277, 312, 361, 466, 629, 861, 1221 |
| NlaIII | CATG | 6 cut(s) | 438, 979, 991, 1079, 1319, 1336 |
| NlaIV | GGNNCC | 7 cut(s) | 82, 639, 660, 723, 766, 863, 1396 |
| NmeAIII | GCCGAG | 1 cut(s) | 251 |
| NmuCI | GTSAC | 1 cut(s) | 125 |
| NsiI | ATGCAT | 1 cut(s) | 1304 |
| PaeR7I | CTCGAG | 1 cut(s) | 1052 |
| PagI | TCATGA | 2 cut(s) | 975, 1315 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 273, 1451 |
| PdmI | GAANNNNTTC | 1 cut(s) | 25 |
| PfeI | GAWTC | 4 cut(s) | 15, 104, 295, 1079 |
| PflFI | GACNNNGTC | 1 cut(s) | 241 |
| PfoI | TCCNGGA | 2 cut(s) | 476, 654 |
| PinAI | ACCGGT | 4 cut(s) | 374, 563, 761, 803 |
| PkrI | GCNGC | 5 cut(s) | 454, 496, 684, 916, 919 |
| PleI | GAGTC | 4 cut(s) | 489, 1225, 1380, 1423 |
| PpsI | GAGTC | 4 cut(s) | 489, 1225, 1380, 1423 |
| Psp6I | CCWGG | 2 cut(s) | 239, 476 |
| PspGI | CCWGG | 2 cut(s) | 239, 476 |
| PspN4I | GGNNCC | 7 cut(s) | 82, 639, 660, 723, 766, 863, 1396 |
| PspPI | GGNCC | 1 cut(s) | 721 |
| PspXI | VCTCGAGB | 1 cut(s) | 1052 |
| PsuI | RGATCY | 4 cut(s) | 80, 466, 629, 861 |
| PsyI | GACNNNGTC | 1 cut(s) | 241 |
| RsaI | GTAC | 3 cut(s) | 871, 1013, 1143 |
| RsaNI | GTAC | 3 cut(s) | 870, 1012, 1142 |
| RseI | CAYNNNNRTG | 3 cut(s) | 974, 990, 1364 |
| SaqAI | TTAA | 1 cut(s) | 849 |
| SatI | GCNGC | 5 cut(s) | 453, 495, 683, 915, 918 |
| Sau3AI | GATC | 9 cut(s) | 80, 207, 277, 312, 361, 466, 629, 861, 1221 |
| Sau96I | GGNCC | 1 cut(s) | 721 |
| SchI | GAGTC | 4 cut(s) | 490, 1225, 1380, 1424 |
| ScrFI | CCNGG | 4 cut(s) | 75, 241, 478, 656 |
| SduI | GDGCHC | 1 cut(s) | 177 |
| SexAI | ACCWGGT | 1 cut(s) | 239 |
| SfaNI | GCATC | 7 cut(s) | 405, 595, 748, 853, 1289, 1311, 1318 |
| SfcI | CTRYAG | 1 cut(s) | 219 |
| Sfr274I | CTCGAG | 1 cut(s) | 1052 |
| SinI | GGWCC | 1 cut(s) | 721 |
| SlaI | CTCGAG | 1 cut(s) | 1052 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 974, 990, 1364 |
| SmlI | CTYRAG | 2 cut(s) | 848, 1052 |
| SmoI | CTYRAG | 2 cut(s) | 848, 1052 |
| Sse9I | AATT | 8 cut(s) | 340, 647, 835, 873, 1153, 1187, 1323, 1420 |
| SsiI | CCGC | 4 cut(s) | 411, 450, 584, 682 |
| SspMI | CTAG | 4 cut(s) | 54, 819, 1296, 1383 |
| StyD4I | CCNGG | 4 cut(s) | 73, 239, 476, 654 |
| StyI | CCWWGG | 1 cut(s) | 434 |
| TaaI | ACNGT | 3 cut(s) | 223, 407, 718 |
| TaiI | ACGT | 5 cut(s) | 270, 713, 755, 897, 1074 |
| TaqI | TCGA | 5 cut(s) | 177, 234, 1053, 1224, 1279 |
| TaqII | GACCGA | 1 cut(s) | 771 |
| TasI | AATT | 8 cut(s) | 340, 647, 835, 873, 1153, 1187, 1323, 1420 |
| TatI | WGTACW | 2 cut(s) | 869, 1141 |
| TauI | GCSGC | 1 cut(s) | 685 |
| TfiI | GAWTC | 4 cut(s) | 15, 104, 295, 1079 |
| Tru1I | TTAA | 1 cut(s) | 849 |
| Tru9I | TTAA | 1 cut(s) | 849 |
| TscAI | CASTG | 2 cut(s) | 723, 1213 |
| TseFI | GTSAC | 1 cut(s) | 125 |
| TseI | GCWGC | 4 cut(s) | 452, 494, 914, 917 |
| Tsp45I | GTSAC | 1 cut(s) | 125 |
| TspDTI | ATGAA | 4 cut(s) | 969, 1004, 1304, 1349 |
| TspGWI | ACGGA | 3 cut(s) | 26, 201, 1398 |
| TspRI | CASTG | 2 cut(s) | 723, 1213 |
| Tth111I | GACNNNGTC | 1 cut(s) | 241 |
| Vha464I | CTTAAG | 1 cut(s) | 848 |
| VpaK11BI | GGWCC | 1 cut(s) | 721 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1019, 1438 |
| XapI | RAATTY | 1 cut(s) | 1187 |
| XbaI | TCTAGA | 1 cut(s) | 1382 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 715, 1038 |
| XhoI | CTCGAG | 1 cut(s) | 1052 |
| XmnI | GAANNNNTTC | 1 cut(s) | 25 |
| XspI | CTAG | 4 cut(s) | 54, 819, 1296, 1383 |
| ZraI | GACGTC | 1 cut(s) | 268 |
| Zsp2I | ATGCAT | 1 cut(s) | 1304 |