zinc finger
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 1011 |
| AccII | CGCG | 2 cut(s) | 445, 820 |
| AciI | CCGC | 2 cut(s) | 142, 259 |
| AclWI | GGATC | 7 cut(s) | 43, 182, 277, 290, 550, 858, 923 |
| AcoI | YGGCCR | 1 cut(s) | 628 |
| AcuI | CTGAAG | 1 cut(s) | 798 |
| AfaI | GTAC | 6 cut(s) | 36, 173, 311, 461, 823, 832 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 31, 238, 792 |
| AgeI | ACCGGT | 1 cut(s) | 1014 |
| AgsI | TTSAA | 4 cut(s) | 185, 295, 721, 958 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 295 |
| AjiI | CACGTC | 1 cut(s) | 626 |
| AjnI | CCWGG | 4 cut(s) | 29, 687, 767, 903 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 578, 610 |
| AluBI | AGCT | 5 cut(s) | 197, 349, 469, 491, 717 |
| AluI | AGCT | 5 cut(s) | 197, 349, 469, 491, 717 |
| Alw21I | GWGCWC | 2 cut(s) | 423, 483 |
| AlwI | GGATC | 7 cut(s) | 43, 182, 277, 290, 550, 858, 923 |
| Ama87I | CYCGRG | 1 cut(s) | 712 |
| AoxI | GGCC | 4 cut(s) | 123, 256, 628, 709 |
| ApeKI | GCWGC | 2 cut(s) | 427, 430 |
| AsiGI | ACCGGT | 1 cut(s) | 1014 |
| AspLEI | GCGC | 3 cut(s) | 160, 445, 820 |
| AspS9I | GGNCC | 3 cut(s) | 256, 710, 1017 |
| AsuC2I | CCSGG | 1 cut(s) | 13 |
| AsuHPI | GGTGA | 3 cut(s) | 221, 253, 617 |
| AvaI | CYCGRG | 1 cut(s) | 712 |
| AvaII | GGWCC | 1 cut(s) | 1017 |
| BalI | TGGCCA | 1 cut(s) | 630 |
| BamHI | GGATCC | 1 cut(s) | 282 |
| Bbv12I | GWGCWC | 2 cut(s) | 423, 483 |
| BbvI | GCAGC | 2 cut(s) | 439, 442 |
| BccI | CCATC | 5 cut(s) | 60, 89, 153, 531, 639 |
| BciT130I | CCWGG | 4 cut(s) | 31, 689, 769, 905 |
| BciVI | GTATCC | 1 cut(s) | 34 |
| BcnI | CCSGG | 1 cut(s) | 13 |
| BfaI | CTAG | 3 cut(s) | 845, 909, 971 |
| BfmI | CTRYAG | 2 cut(s) | 425, 790 |
| BfoI | RGCGCY | 1 cut(s) | 161 |
| BfuI | GTATCC | 1 cut(s) | 34 |
| BisI | GCNGC | 4 cut(s) | 142, 259, 428, 431 |
| BlsI | GCNGC | 4 cut(s) | 143, 260, 429, 432 |
| BmcAI | AGTACT | 1 cut(s) | 173 |
| Bme1390I | CCNGG | 5 cut(s) | 13, 31, 689, 769, 905 |
| Bme18I | GGWCC | 1 cut(s) | 1017 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 295 |
| BmeT110I | CYCGRG | 1 cut(s) | 712 |
| BmgBI | CACGTC | 1 cut(s) | 626 |
| BmgT120I | GGNCC | 3 cut(s) | 256, 710, 1017 |
| BmiI | GGNNCC | 4 cut(s) | 257, 284, 693, 784 |
| BmrFI | CCNGG | 5 cut(s) | 13, 31, 689, 769, 905 |
| BpuEI | CTTGAG | 3 cut(s) | 93, 232, 854 |
| BpuMI | CCSGG | 1 cut(s) | 13 |
| BsaBI | GATNNNNATC | 1 cut(s) | 855 |
| BsaJI | CCNNGG | 5 cut(s) | 30, 251, 667, 695, 767 |
| BsaWI | WCCGGW | 1 cut(s) | 1014 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 31, 238, 792 |
| Bse118I | RCCGGY | 1 cut(s) | 1014 |
| Bse1I | ACTGG | 3 cut(s) | 42, 544, 932 |
| Bse3DI | GCAATG | 1 cut(s) | 811 |
| Bse8I | GATNNNNATC | 1 cut(s) | 855 |
| BseBI | CCWGG | 4 cut(s) | 31, 689, 769, 905 |
| BseDI | CCNNGG | 5 cut(s) | 30, 251, 667, 695, 767 |
| BseGI | GGATG | 2 cut(s) | 101, 593 |
| BseJI | GATNNNNATC | 1 cut(s) | 855 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 31, 238, 792 |
| BseMI | GCAATG | 1 cut(s) | 811 |
| BseMII | CTCAG | 5 cut(s) | 269, 353, 360, 409, 447 |
| BseNI | ACTGG | 3 cut(s) | 42, 544, 932 |
| BseXI | GCAGC | 2 cut(s) | 439, 442 |
| BsgI | GTGCAG | 1 cut(s) | 531 |
| Bsh1236I | CGCG | 2 cut(s) | 445, 820 |
| BshFI | GGCC | 4 cut(s) | 125, 258, 630, 711 |
| BshTI | ACCGGT | 1 cut(s) | 1014 |
| BsiHKAI | GWGCWC | 2 cut(s) | 423, 483 |
| BsiHKCI | CYCGRG | 1 cut(s) | 712 |
| BsiSI | CCGG | 2 cut(s) | 12, 1015 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 31, 238, 792 |
| BsmI | GAATGC | 1 cut(s) | 211 |
| BsnI | GGCC | 4 cut(s) | 125, 258, 630, 711 |
| BsoBI | CYCGRG | 1 cut(s) | 712 |
| Bsp1286I | GDGCHC | 2 cut(s) | 423, 483 |
| Bsp143I | GATC | 8 cut(s) | 48, 112, 187, 282, 542, 850, 888, 928 |
| Bsp19I | CCATGG | 1 cut(s) | 667 |
| BspACI | CCGC | 2 cut(s) | 142, 259 |
| BspANI | GGCC | 4 cut(s) | 125, 258, 630, 711 |
| BspCNI | CTCAG | 5 cut(s) | 270, 352, 361, 408, 448 |
| BspFNI | CGCG | 2 cut(s) | 445, 820 |
| BspLI | GGNNCC | 4 cut(s) | 257, 284, 693, 784 |
| BspMAI | CTGCAG | 1 cut(s) | 429 |
| BspPI | GGATC | 7 cut(s) | 43, 182, 277, 290, 550, 858, 923 |
| BsrDI | GCAATG | 1 cut(s) | 811 |
| BsrFI | RCCGGY | 1 cut(s) | 1014 |
| BsrI | ACTGG | 3 cut(s) | 42, 544, 932 |
| BssAI | RCCGGY | 1 cut(s) | 1014 |
| BssECI | CCNNGG | 5 cut(s) | 30, 251, 667, 695, 767 |
| BssMI | GATC | 8 cut(s) | 48, 112, 187, 282, 542, 850, 888, 928 |
| BssNAI | GTATAC | 1 cut(s) | 1012 |
| BssT1I | CCWWGG | 2 cut(s) | 251, 667 |
| Bst1107I | GTATAC | 1 cut(s) | 1012 |
| Bst2UI | CCWGG | 4 cut(s) | 31, 689, 769, 905 |
| Bst4CI | ACNGT | 2 cut(s) | 181, 241 |
| BstC8I | GCNNGC | 1 cut(s) | 787 |
| BstDEI | CTNAG | 6 cut(s) | 278, 339, 369, 395, 456, 484 |
| BstDSI | CCRYGG | 1 cut(s) | 667 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 790 |
| BstF5I | GGATG | 2 cut(s) | 101, 593 |
| BstFNI | CGCG | 2 cut(s) | 445, 820 |
| BstH2I | RGCGCY | 1 cut(s) | 161 |
| BstHHI | GCGC | 3 cut(s) | 160, 445, 820 |
| BstKTI | GATC | 8 cut(s) | 51, 115, 190, 285, 545, 853, 891, 931 |
| BstMBI | GATC | 8 cut(s) | 48, 112, 187, 282, 542, 850, 888, 928 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 427, 741, 817 |
| BstNI | CCWGG | 4 cut(s) | 31, 689, 769, 905 |
| BstSCI | CCNGG | 5 cut(s) | 11, 29, 687, 767, 903 |
| BstSFI | CTRYAG | 2 cut(s) | 425, 790 |
| BstUI | CGCG | 2 cut(s) | 445, 820 |
| BstV1I | GCAGC | 2 cut(s) | 439, 442 |
| BstX2I | RGATCY | 5 cut(s) | 48, 187, 282, 542, 850 |
| BstYI | RGATCY | 5 cut(s) | 48, 187, 282, 542, 850 |
| BstZ17I | GTATAC | 1 cut(s) | 1012 |
| BsuI | GTATCC | 1 cut(s) | 34 |
| BsuRI | GGCC | 4 cut(s) | 125, 258, 630, 711 |
| BtgI | CCRYGG | 1 cut(s) | 667 |
| BtrI | CACGTC | 1 cut(s) | 626 |
| BtsCI | GGATG | 2 cut(s) | 101, 593 |
| BtsIMutI | CAGTG | 3 cut(s) | 306, 453, 939 |
| Cac8I | GCNNGC | 1 cut(s) | 787 |
| CfoI | GCGC | 3 cut(s) | 160, 445, 820 |
| Cfr10I | RCCGGY | 1 cut(s) | 1014 |
| Cfr13I | GGNCC | 3 cut(s) | 256, 710, 1017 |
| CsiI | ACCWGGT | 1 cut(s) | 687 |
| Csp6I | GTAC | 6 cut(s) | 35, 172, 310, 460, 822, 831 |
| CspAI | ACCGGT | 1 cut(s) | 1014 |
| CviAII | CATG | 2 cut(s) | 127, 668 |
| CviQI | GTAC | 6 cut(s) | 35, 172, 310, 460, 822, 831 |
| DdeI | CTNAG | 6 cut(s) | 278, 339, 369, 395, 456, 484 |
| DpnI | GATC | 8 cut(s) | 50, 114, 189, 284, 544, 852, 890, 930 |
| DpnII | GATC | 8 cut(s) | 48, 112, 187, 282, 542, 850, 888, 928 |
| DriI | GACNNNNNGTC | 1 cut(s) | 295 |
| EaeI | YGGCCR | 1 cut(s) | 628 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 295 |
| Eco130I | CCWWGG | 2 cut(s) | 251, 667 |
| Eco32I | GATATC | 1 cut(s) | 474 |
| Eco47I | GGWCC | 1 cut(s) | 1017 |
| Eco57I | CTGAAG | 1 cut(s) | 798 |
| Eco88I | CYCGRG | 1 cut(s) | 712 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 790 |
| EcoRII | CCWGG | 4 cut(s) | 29, 687, 767, 903 |
| EcoRV | GATATC | 1 cut(s) | 474 |
| EcoT14I | CCWWGG | 2 cut(s) | 251, 667 |
| ErhI | CCWWGG | 2 cut(s) | 251, 667 |
| FaeI | CATG | 2 cut(s) | 130, 671 |
| FatI | CATG | 2 cut(s) | 126, 667 |
| FauNDI | CATATG | 1 cut(s) | 378 |
| FblI | GTMKAC | 1 cut(s) | 1011 |
| Fnu4HI | GCNGC | 4 cut(s) | 142, 259, 428, 431 |
| FokI | GGATG | 2 cut(s) | 88, 580 |
| Fsp4HI | GCNGC | 4 cut(s) | 142, 259, 428, 431 |
| FspBI | CTAG | 3 cut(s) | 845, 909, 971 |
| GlaI | GCGC | 3 cut(s) | 159, 444, 819 |
| GluI | GCNGC | 4 cut(s) | 142, 259, 428, 431 |
| HaeII | RGCGCY | 1 cut(s) | 161 |
| HaeIII | GGCC | 4 cut(s) | 125, 258, 630, 711 |
| HapII | CCGG | 2 cut(s) | 12, 1015 |
| HhaI | GCGC | 3 cut(s) | 160, 445, 820 |
| Hin1II | CATG | 2 cut(s) | 130, 671 |
| Hin6I | GCGC | 3 cut(s) | 158, 443, 818 |
| HinP1I | GCGC | 3 cut(s) | 158, 443, 818 |
| HinfI | GANTC | 4 cut(s) | 67, 271, 391, 730 |
| HpaII | CCGG | 2 cut(s) | 12, 1015 |
| HphI | GGTGA | 3 cut(s) | 221, 253, 617 |
| Hpy166II | GTNNAC | 3 cut(s) | 270, 586, 1012 |
| Hpy188I | TCNGA | 5 cut(s) | 279, 329, 342, 696, 778 |
| Hpy8I | GTNNAC | 3 cut(s) | 270, 586, 1012 |
| HpyAV | CCTTC | 3 cut(s) | 83, 649, 773 |
| HpyCH4III | ACNGT | 2 cut(s) | 181, 241 |
| HpyCH4IV | ACGT | 2 cut(s) | 417, 625 |
| HpyCH4V | TGCA | 3 cut(s) | 320, 427, 548 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 427, 741, 817 |
| HpyF3I | CTNAG | 6 cut(s) | 278, 339, 369, 395, 456, 484 |
| HpySE526I | ACGT | 2 cut(s) | 417, 625 |
| Hsp92II | CATG | 2 cut(s) | 130, 671 |
| HspAI | GCGC | 3 cut(s) | 158, 443, 818 |
| Kzo9I | GATC | 8 cut(s) | 48, 112, 187, 282, 542, 850, 888, 928 |
| LmnI | GCTCC | 4 cut(s) | 93, 426, 769, 782 |
| Lsp1109I | GCAGC | 2 cut(s) | 439, 442 |
| MabI | ACCWGGT | 1 cut(s) | 687 |
| MaeI | CTAG | 3 cut(s) | 845, 909, 971 |
| MaeII | ACGT | 2 cut(s) | 417, 625 |
| MalI | GATC | 8 cut(s) | 50, 114, 189, 284, 544, 852, 890, 930 |
| MboI | GATC | 8 cut(s) | 48, 112, 187, 282, 542, 850, 888, 928 |
| MboII | GAAGA | 2 cut(s) | 28, 197 |
| MflI | RGATCY | 5 cut(s) | 48, 187, 282, 542, 850 |
| MhlI | GDGCHC | 2 cut(s) | 423, 483 |
| MlsI | TGGCCA | 1 cut(s) | 630 |
| MluCI | AATT | 5 cut(s) | 19, 313, 330, 703, 892 |
| MluNI | TGGCCA | 1 cut(s) | 630 |
| MlyI | GAGTC | 2 cut(s) | 265, 385 |
| MmeI | TCCRAC | 1 cut(s) | 438 |
| Mox20I | TGGCCA | 1 cut(s) | 630 |
| MscI | TGGCCA | 1 cut(s) | 630 |
| MseI | TTAA | 1 cut(s) | 176 |
| MslI | CAYNNNNRTG | 2 cut(s) | 150, 972 |
| Msp20I | TGGCCA | 1 cut(s) | 630 |
| MspA1I | CMGCKG | 1 cut(s) | 469 |
| MspI | CCGG | 2 cut(s) | 12, 1015 |
| MspR9I | CCNGG | 5 cut(s) | 13, 31, 689, 769, 905 |
| Mva1269I | GAATGC | 1 cut(s) | 211 |
| MvaI | CCWGG | 4 cut(s) | 31, 689, 769, 905 |
| MvnI | CGCG | 2 cut(s) | 445, 820 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 427, 741, 817 |
| NciI | CCSGG | 1 cut(s) | 13 |
| NcoI | CCATGG | 1 cut(s) | 667 |
| NdeI | CATATG | 1 cut(s) | 378 |
| NdeII | GATC | 8 cut(s) | 48, 112, 187, 282, 542, 850, 888, 928 |
| NlaIII | CATG | 2 cut(s) | 130, 671 |
| NlaIV | GGNNCC | 4 cut(s) | 257, 284, 693, 784 |
| PctI | GAATGC | 1 cut(s) | 211 |
| PfeI | GAWTC | 2 cut(s) | 67, 730 |
| PinAI | ACCGGT | 1 cut(s) | 1014 |
| PkrI | GCNGC | 4 cut(s) | 143, 260, 429, 432 |
| PleI | GAGTC | 2 cut(s) | 265, 385 |
| PpsI | GAGTC | 2 cut(s) | 265, 385 |
| Psp6I | CCWGG | 4 cut(s) | 29, 687, 767, 903 |
| PspGI | CCWGG | 4 cut(s) | 29, 687, 767, 903 |
| PspN4I | GGNNCC | 4 cut(s) | 257, 284, 693, 784 |
| PspPI | GGNCC | 3 cut(s) | 256, 710, 1017 |
| PstI | CTGCAG | 1 cut(s) | 429 |
| PsuI | RGATCY | 5 cut(s) | 48, 187, 282, 542, 850 |
| PvuII | CAGCTG | 1 cut(s) | 469 |
| RsaI | GTAC | 6 cut(s) | 36, 173, 311, 461, 823, 832 |
| RsaNI | GTAC | 6 cut(s) | 35, 172, 310, 460, 822, 831 |
| RseI | CAYNNNNRTG | 2 cut(s) | 150, 972 |
| SaqAI | TTAA | 1 cut(s) | 176 |
| SatI | GCNGC | 4 cut(s) | 142, 259, 428, 431 |
| Sau3AI | GATC | 8 cut(s) | 48, 112, 187, 282, 542, 850, 888, 928 |
| Sau96I | GGNCC | 3 cut(s) | 256, 710, 1017 |
| ScaI | AGTACT | 1 cut(s) | 173 |
| SchI | GAGTC | 2 cut(s) | 265, 385 |
| ScrFI | CCNGG | 5 cut(s) | 13, 31, 689, 769, 905 |
| SduI | GDGCHC | 2 cut(s) | 423, 483 |
| SexAI | ACCWGGT | 1 cut(s) | 687 |
| SfcI | CTRYAG | 2 cut(s) | 425, 790 |
| SinI | GGWCC | 1 cut(s) | 1017 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 150, 972 |
| SmlI | CTYRAG | 3 cut(s) | 108, 211, 869 |
| SmoI | CTYRAG | 3 cut(s) | 108, 211, 869 |
| Sse9I | AATT | 5 cut(s) | 19, 313, 330, 703, 892 |
| SsiI | CCGC | 2 cut(s) | 142, 259 |
| SspMI | CTAG | 3 cut(s) | 845, 909, 971 |
| StyD4I | CCNGG | 5 cut(s) | 11, 29, 687, 767, 903 |
| StyI | CCWWGG | 2 cut(s) | 251, 667 |
| TaaI | ACNGT | 2 cut(s) | 181, 241 |
| TaiI | ACGT | 2 cut(s) | 420, 628 |
| TaqI | TCGA | 4 cut(s) | 579, 643, 885, 900 |
| TasI | AATT | 5 cut(s) | 19, 313, 330, 703, 892 |
| TatI | WGTACW | 3 cut(s) | 171, 309, 459 |
| TauI | GCSGC | 2 cut(s) | 144, 261 |
| TfiI | GAWTC | 2 cut(s) | 67, 730 |
| Tru1I | TTAA | 1 cut(s) | 176 |
| Tru9I | TTAA | 1 cut(s) | 176 |
| TscAI | CASTG | 3 cut(s) | 306, 460, 939 |
| TseI | GCWGC | 2 cut(s) | 427, 430 |
| TspDTI | ATGAA | 5 cut(s) | 124, 359, 395, 530, 1020 |
| TspGWI | ACGGA | 1 cut(s) | 180 |
| TspRI | CASTG | 3 cut(s) | 306, 460, 939 |
| VpaK11BI | GGWCC | 1 cut(s) | 1017 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 790 |
| XbaI | TCTAGA | 1 cut(s) | 970 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 52 |
| XmiI | GTMKAC | 1 cut(s) | 1011 |
| XspI | CTAG | 3 cut(s) | 845, 909, 971 |
| ZrmI | AGTACT | 1 cut(s) | 173 |