gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 234 |
| AcsI | RAATTY | 2 cut(s) | 7, 100 |
| AcuI | CTGAAG | 1 cut(s) | 311 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 64, 220 |
| AgsI | TTSAA | 2 cut(s) | 13, 119 |
| AluBI | AGCT | 2 cut(s) | 82, 149 |
| AluI | AGCT | 2 cut(s) | 82, 149 |
| Alw26I | GTCTC | 1 cut(s) | 46 |
| AlwI | GGATC | 1 cut(s) | 234 |
| ApoI | RAATTY | 2 cut(s) | 7, 100 |
| AspLEI | GCGC | 1 cut(s) | 320 |
| AspS9I | GGNCC | 1 cut(s) | 67 |
| AsuHPI | GGTGA | 1 cut(s) | 259 |
| AvaII | GGWCC | 1 cut(s) | 67 |
| BbsI | GAAGAC | 1 cut(s) | 187 |
| BccI | CCATC | 1 cut(s) | 121 |
| BcoDI | GTCTC | 1 cut(s) | 46 |
| BfaI | CTAG | 1 cut(s) | 45 |
| Bme18I | GGWCC | 1 cut(s) | 67 |
| BmgT120I | GGNCC | 1 cut(s) | 67 |
| BmiI | GGNNCC | 1 cut(s) | 68 |
| BmrI | ACTGGG | 1 cut(s) | 131 |
| BmuI | ACTGGG | 1 cut(s) | 131 |
| BpiI | GAAGAC | 1 cut(s) | 187 |
| BpuEI | CTTGAG | 1 cut(s) | 44 |
| BsaBI | GATNNNNATC | 1 cut(s) | 173 |
| BsaI | GGTCTC | 1 cut(s) | 46 |
| BsaJI | CCNNGG | 1 cut(s) | 324 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 64, 220 |
| Bse1I | ACTGG | 1 cut(s) | 137 |
| Bse8I | GATNNNNATC | 1 cut(s) | 173 |
| BseDI | CCNNGG | 1 cut(s) | 324 |
| BseGI | GGATG | 1 cut(s) | 174 |
| BseJI | GATNNNNATC | 1 cut(s) | 173 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 64, 220 |
| BseNI | ACTGG | 1 cut(s) | 137 |
| BseRI | GAGGAG | 1 cut(s) | 236 |
| BslFI | GGGAC | 1 cut(s) | 93 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 64, 220 |
| BsmAI | GTCTC | 1 cut(s) | 46 |
| BsmFI | GGGAC | 1 cut(s) | 93 |
| Bso31I | GGTCTC | 1 cut(s) | 46 |
| Bsp143I | GATC | 2 cut(s) | 168, 226 |
| BspHI | TCATGA | 1 cut(s) | 190 |
| BspLI | GGNNCC | 1 cut(s) | 68 |
| BspPI | GGATC | 1 cut(s) | 234 |
| BspTNI | GGTCTC | 1 cut(s) | 46 |
| BsrI | ACTGG | 1 cut(s) | 137 |
| BssECI | CCNNGG | 1 cut(s) | 324 |
| BssMI | GATC | 2 cut(s) | 168, 226 |
| BssT1I | CCWWGG | 1 cut(s) | 324 |
| Bst4CI | ACNGT | 1 cut(s) | 307 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 218 |
| BstF5I | GGATG | 1 cut(s) | 174 |
| BstHHI | GCGC | 1 cut(s) | 320 |
| BstKTI | GATC | 2 cut(s) | 171, 229 |
| BstMAI | GTCTC | 1 cut(s) | 46 |
| BstMBI | GATC | 2 cut(s) | 168, 226 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 326 |
| BstV2I | GAAGAC | 1 cut(s) | 187 |
| BtsCI | GGATG | 1 cut(s) | 174 |
| BtsI | GCAGTG | 1 cut(s) | 159 |
| BtsIMutI | CAGTG | 1 cut(s) | 159 |
| CciI | TCATGA | 1 cut(s) | 190 |
| CfoI | GCGC | 1 cut(s) | 320 |
| Cfr13I | GGNCC | 1 cut(s) | 67 |
| CseI | GACGC | 2 cut(s) | 95, 203 |
| CviAII | CATG | 2 cut(s) | 166, 191 |
| CviJI | RGCY | 4 cut(s) | 82, 149, 254, 329 |
| CviKI_1 | RGCY | 4 cut(s) | 82, 149, 254, 329 |
| DpnI | GATC | 2 cut(s) | 170, 228 |
| DpnII | GATC | 2 cut(s) | 168, 226 |
| Eco130I | CCWWGG | 1 cut(s) | 324 |
| Eco31I | GGTCTC | 1 cut(s) | 46 |
| Eco47I | GGWCC | 1 cut(s) | 67 |
| Eco57I | CTGAAG | 1 cut(s) | 311 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 218 |
| EcoT14I | CCWWGG | 1 cut(s) | 324 |
| ErhI | CCWWGG | 1 cut(s) | 324 |
| FaeI | CATG | 2 cut(s) | 169, 194 |
| FaiI | YATR | 7 cut(s) | 167, 186, 192, 241, 280, 302, 338 |
| FaqI | GGGAC | 1 cut(s) | 93 |
| FatI | CATG | 2 cut(s) | 165, 190 |
| FokI | GGATG | 1 cut(s) | 161 |
| FspBI | CTAG | 1 cut(s) | 45 |
| GlaI | GCGC | 1 cut(s) | 319 |
| HgaI | GACGC | 2 cut(s) | 95, 203 |
| HhaI | GCGC | 1 cut(s) | 320 |
| Hin1II | CATG | 2 cut(s) | 169, 194 |
| Hin6I | GCGC | 1 cut(s) | 318 |
| HinP1I | GCGC | 1 cut(s) | 318 |
| HincII | GTYRAC | 1 cut(s) | 310 |
| HindII | GTYRAC | 1 cut(s) | 310 |
| HphI | GGTGA | 1 cut(s) | 259 |
| Hpy166II | GTNNAC | 1 cut(s) | 310 |
| Hpy188I | TCNGA | 1 cut(s) | 179 |
| Hpy188III | TCNNGA | 2 cut(s) | 45, 191 |
| Hpy8I | GTNNAC | 1 cut(s) | 310 |
| HpyCH4III | ACNGT | 1 cut(s) | 307 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 326 |
| Hsp92II | CATG | 2 cut(s) | 169, 194 |
| HspAI | GCGC | 1 cut(s) | 318 |
| Kzo9I | GATC | 2 cut(s) | 168, 226 |
| LpnPI | CCDG | 2 cut(s) | 150, 302 |
| MaeI | CTAG | 1 cut(s) | 45 |
| MaeIII | GTNAC | 1 cut(s) | 157 |
| MalI | GATC | 2 cut(s) | 170, 228 |
| MboI | GATC | 2 cut(s) | 168, 226 |
| MboII | GAAGA | 4 cut(s) | 60, 131, 163, 192 |
| MluCI | AATT | 2 cut(s) | 7, 100 |
| MnlI | CCTC | 6 cut(s) | 31, 68, 98, 121, 214, 217 |
| MseI | TTAA | 2 cut(s) | 263, 332 |
| MslI | CAYNNNNRTG | 2 cut(s) | 164, 189 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 326 |
| NdeII | GATC | 2 cut(s) | 168, 226 |
| NlaIII | CATG | 2 cut(s) | 169, 194 |
| NlaIV | GGNNCC | 1 cut(s) | 68 |
| NmuCI | GTSAC | 1 cut(s) | 157 |
| PagI | TCATGA | 1 cut(s) | 190 |
| PspN4I | GGNNCC | 1 cut(s) | 68 |
| PspPI | GGNCC | 1 cut(s) | 67 |
| RseI | CAYNNNNRTG | 2 cut(s) | 164, 189 |
| SaqAI | TTAA | 2 cut(s) | 263, 332 |
| Sau3AI | GATC | 2 cut(s) | 168, 226 |
| Sau96I | GGNCC | 1 cut(s) | 67 |
| SetI | ASST | 6 cut(s) | 42, 60, 84, 90, 151, 216 |
| SinI | GGWCC | 1 cut(s) | 67 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 164, 189 |
| SmlI | CTYRAG | 1 cut(s) | 59 |
| SmoI | CTYRAG | 1 cut(s) | 59 |
| Sse9I | AATT | 2 cut(s) | 7, 100 |
| SspMI | CTAG | 1 cut(s) | 45 |
| StyI | CCWWGG | 1 cut(s) | 324 |
| TaaI | ACNGT | 1 cut(s) | 307 |
| TaqI | TCGA | 2 cut(s) | 5, 21 |
| TasI | AATT | 2 cut(s) | 7, 100 |
| Tru1I | TTAA | 2 cut(s) | 263, 332 |
| Tru9I | TTAA | 2 cut(s) | 263, 332 |
| TscAI | CASTG | 1 cut(s) | 166 |
| TseFI | GTSAC | 1 cut(s) | 157 |
| Tsp45I | GTSAC | 1 cut(s) | 157 |
| TspDTI | ATGAA | 2 cut(s) | 163, 179 |
| TspRI | CASTG | 1 cut(s) | 166 |
| VpaK11BI | GGWCC | 1 cut(s) | 67 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 218 |
| XapI | RAATTY | 2 cut(s) | 7, 100 |
| XbaI | TCTAGA | 1 cut(s) | 44 |
| XspI | CTAG | 1 cut(s) | 45 |