No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 329, 1116 |
| AccB1I | GGYRCC | 1 cut(s) | 1210 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1421 |
| AccII | CGCG | 3 cut(s) | 292, 1056, 1200 |
| AciI | CCGC | 7 cut(s) | 153, 156, 197, 267, 290, 769, 1290 |
| AclI | AACGTT | 1 cut(s) | 720 |
| AclWI | GGATC | 2 cut(s) | 164, 1413 |
| AcoI | YGGCCR | 5 cut(s) | 216, 236, 370, 389, 414 |
| AcsI | RAATTY | 2 cut(s) | 57, 67 |
| AcyI | GRCGYC | 1 cut(s) | 1211 |
| AfaI | GTAC | 2 cut(s) | 753, 1288 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 180, 214, 368, 493, 670, 1067, 1138, 1157, 1421 |
| AflII | CTTAAG | 1 cut(s) | 518 |
| AflIII | ACRYGT | 2 cut(s) | 86, 1283 |
| AgsI | TTSAA | 6 cut(s) | 40, 167, 442, 451, 596, 897 |
| AjiI | CACGTC | 2 cut(s) | 313, 331 |
| AjnI | CCWGG | 1 cut(s) | 179 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 554, 586 |
| AluBI | AGCT | 5 cut(s) | 318, 608, 791, 949, 971 |
| AluI | AGCT | 5 cut(s) | 318, 608, 791, 949, 971 |
| Alw21I | GWGCWC | 3 cut(s) | 570, 951, 1167 |
| Alw26I | GTCTC | 2 cut(s) | 461, 883 |
| Alw44I | GTGCAC | 1 cut(s) | 1163 |
| AlwI | GGATC | 2 cut(s) | 164, 1413 |
| Ama87I | CYCGRG | 2 cut(s) | 464, 1151 |
| AoxI | GGCC | 7 cut(s) | 198, 216, 236, 370, 389, 414, 1275 |
| ApaLI | GTGCAC | 1 cut(s) | 1163 |
| ApeKI | GCWGC | 1 cut(s) | 706 |
| ApoI | RAATTY | 2 cut(s) | 57, 67 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 792 |
| AspLEI | GCGC | 5 cut(s) | 479, 510, 1058, 1202, 1213 |
| AspS9I | GGNCC | 4 cut(s) | 199, 496, 1118, 1275 |
| AsuC2I | CCSGG | 1 cut(s) | 341 |
| AvaI | CYCGRG | 2 cut(s) | 464, 1151 |
| AvaII | GGWCC | 2 cut(s) | 496, 1118 |
| BaeGI | GKGCMC | 1 cut(s) | 1167 |
| BanI | GGYRCC | 1 cut(s) | 1210 |
| BanII | GRGCYC | 2 cut(s) | 277, 951 |
| BbsI | GAAGAC | 2 cut(s) | 681, 1401 |
| Bbv12I | GWGCWC | 3 cut(s) | 570, 951, 1167 |
| BbvI | GCAGC | 1 cut(s) | 718 |
| BccI | CCATC | 4 cut(s) | 425, 521, 551, 750 |
| BceAI | ACGGC | 1 cut(s) | 385 |
| BciT130I | CCWGG | 1 cut(s) | 181 |
| BciVI | GTATCC | 1 cut(s) | 476 |
| BcnI | CCSGG | 1 cut(s) | 341 |
| BcoDI | GTCTC | 2 cut(s) | 461, 883 |
| BfaI | CTAG | 3 cut(s) | 555, 1257, 1379 |
| BfmI | CTRYAG | 1 cut(s) | 1048 |
| BfoI | RGCGCY | 1 cut(s) | 1214 |
| BfrI | CTTAAG | 1 cut(s) | 518 |
| BfuI | GTATCC | 1 cut(s) | 476 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1208 |
| BglII | AGATCT | 2 cut(s) | 303, 1381 |
| BisI | GCNGC | 4 cut(s) | 156, 198, 290, 707 |
| BlsI | GCNGC | 4 cut(s) | 157, 199, 291, 708 |
| Bme1390I | CCNGG | 2 cut(s) | 181, 341 |
| Bme18I | GGWCC | 2 cut(s) | 496, 1118 |
| BmeT110I | CYCGRG | 2 cut(s) | 464, 1151 |
| BmgBI | CACGTC | 2 cut(s) | 313, 331 |
| BmgT120I | GGNCC | 4 cut(s) | 199, 496, 1118, 1275 |
| BmiI | GGNNCC | 7 cut(s) | 201, 274, 497, 958, 1171, 1212, 1227 |
| BmrFI | CCNGG | 2 cut(s) | 181, 341 |
| BmrI | ACTGGG | 1 cut(s) | 271 |
| BmuI | ACTGGG | 1 cut(s) | 271 |
| BpiI | GAAGAC | 2 cut(s) | 681, 1401 |
| BpmI | CTGGAG | 2 cut(s) | 163, 1058 |
| BpuEI | CTTGAG | 1 cut(s) | 722 |
| BpuMI | CCSGG | 1 cut(s) | 341 |
| BsaBI | GATNNNNATC | 4 cut(s) | 848, 1258, 1374, 1380 |
| BsaHI | GRCGYC | 1 cut(s) | 1211 |
| BsaJI | CCNNGG | 3 cut(s) | 339, 1017, 1173 |
| BsaWI | WCCGGW | 2 cut(s) | 241, 399 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 302, 332, 554, 584 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 180, 214, 368, 493, 670, 1067, 1138, 1157, 1421 |
| Bse118I | RCCGGY | 2 cut(s) | 193, 214 |
| Bse1I | ACTGG | 3 cut(s) | 277, 373, 478 |
| Bse8I | GATNNNNATC | 4 cut(s) | 848, 1258, 1374, 1380 |
| BseBI | CCWGG | 1 cut(s) | 181 |
| BseDI | CCNNGG | 3 cut(s) | 339, 1017, 1173 |
| BseGI | GGATG | 2 cut(s) | 435, 543 |
| BseJI | GATNNNNATC | 4 cut(s) | 848, 1258, 1374, 1380 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 180, 214, 368, 493, 670, 1067, 1138, 1157, 1421 |
| BseNI | ACTGG | 3 cut(s) | 277, 373, 478 |
| BseSI | GKGCMC | 1 cut(s) | 1167 |
| BseX3I | CGGCCG | 1 cut(s) | 216 |
| BseXI | GCAGC | 1 cut(s) | 718 |
| BsgI | GTGCAG | 1 cut(s) | 867 |
| Bsh1236I | CGCG | 3 cut(s) | 292, 1056, 1200 |
| Bsh1285I | CGRYCG | 1 cut(s) | 219 |
| BshFI | GGCC | 7 cut(s) | 200, 218, 238, 372, 391, 416, 1277 |
| BshNI | GGYRCC | 1 cut(s) | 1210 |
| BsiEI | CGRYCG | 1 cut(s) | 219 |
| BsiHKAI | GWGCWC | 3 cut(s) | 570, 951, 1167 |
| BsiHKCI | CYCGRG | 2 cut(s) | 464, 1151 |
| BsiSI | CCGG | 8 cut(s) | 194, 215, 219, 242, 341, 388, 400, 413 |
| BslFI | GGGAC | 3 cut(s) | 242, 790, 1112 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 180, 214, 368, 493, 670, 1067, 1138, 1157, 1421 |
| BsmAI | GTCTC | 2 cut(s) | 461, 883 |
| BsmBI | CGTCTC | 1 cut(s) | 883 |
| BsmFI | GGGAC | 3 cut(s) | 242, 790, 1112 |
| BsnI | GGCC | 7 cut(s) | 200, 218, 238, 372, 391, 416, 1277 |
| BsoBI | CYCGRG | 2 cut(s) | 464, 1151 |
| Bsp1286I | GDGCHC | 4 cut(s) | 277, 570, 951, 1167 |
| BspACI | CCGC | 7 cut(s) | 153, 156, 197, 267, 290, 769, 1290 |
| BspANI | GGCC | 7 cut(s) | 200, 218, 238, 372, 391, 416, 1277 |
| BspFNI | CGCG | 3 cut(s) | 292, 1056, 1200 |
| BspHI | TCATGA | 2 cut(s) | 624, 943 |
| BspLI | GGNNCC | 7 cut(s) | 201, 274, 497, 958, 1171, 1212, 1227 |
| BspPI | GGATC | 2 cut(s) | 164, 1413 |
| BspQI | GCTCTTC | 1 cut(s) | 798 |
| BspT107I | GGYRCC | 1 cut(s) | 1210 |
| BspTI | CTTAAG | 1 cut(s) | 518 |
| BsrFI | RCCGGY | 2 cut(s) | 193, 214 |
| BsrI | ACTGG | 3 cut(s) | 277, 373, 478 |
| BssAI | RCCGGY | 2 cut(s) | 193, 214 |
| BssECI | CCNNGG | 3 cut(s) | 339, 1017, 1173 |
| BssNI | GRCGYC | 1 cut(s) | 1211 |
| Bst2UI | CCWGG | 1 cut(s) | 181 |
| Bst4CI | ACNGT | 1 cut(s) | 1174 |
| Bst6I | CTCTTC | 1 cut(s) | 798 |
| BstACI | GRCGYC | 1 cut(s) | 1211 |
| BstAFI | CTTAAG | 1 cut(s) | 518 |
| BstC8I | GCNNGC | 3 cut(s) | 267, 582, 1163 |
| BstDEI | CTNAG | 2 cut(s) | 1026, 1385 |
| BstDSI | CCRYGG | 2 cut(s) | 1017, 1173 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 668 |
| BstF5I | GGATG | 2 cut(s) | 435, 543 |
| BstFNI | CGCG | 3 cut(s) | 292, 1056, 1200 |
| BstH2I | RGCGCY | 1 cut(s) | 1214 |
| BstHHI | GCGC | 5 cut(s) | 479, 510, 1058, 1202, 1213 |
| BstMAI | GTCTC | 2 cut(s) | 461, 883 |
| BstMCI | CGRYCG | 1 cut(s) | 219 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 281, 295, 315, 324, 333, 605, 1208 |
| BstNI | CCWGG | 1 cut(s) | 181 |
| BstNSI | RCATGY | 2 cut(s) | 584, 1287 |
| BstSCI | CCNGG | 2 cut(s) | 179, 339 |
| BstSFI | CTRYAG | 1 cut(s) | 1048 |
| BstSLI | GKGCMC | 1 cut(s) | 1167 |
| BstUI | CGCG | 3 cut(s) | 292, 1056, 1200 |
| BstV1I | GCAGC | 1 cut(s) | 718 |
| BstV2I | GAAGAC | 2 cut(s) | 681, 1401 |
| BstX2I | RGATCY | 3 cut(s) | 169, 303, 1381 |
| BstYI | RGATCY | 3 cut(s) | 169, 303, 1381 |
| BstZI | CGGCCG | 1 cut(s) | 216 |
| BsuI | GTATCC | 1 cut(s) | 476 |
| BsuRI | GGCC | 7 cut(s) | 200, 218, 238, 372, 391, 416, 1277 |
| BtgI | CCRYGG | 2 cut(s) | 1017, 1173 |
| BtrI | CACGTC | 2 cut(s) | 313, 331 |
| BtsCI | GGATG | 2 cut(s) | 435, 543 |
| BtsIMutI | CAGTG | 1 cut(s) | 884 |
| Cac8I | GCNNGC | 3 cut(s) | 267, 582, 1163 |
| CciI | TCATGA | 2 cut(s) | 624, 943 |
| CfoI | GCGC | 5 cut(s) | 479, 510, 1058, 1202, 1213 |
| Cfr10I | RCCGGY | 2 cut(s) | 193, 214 |
| Cfr13I | GGNCC | 4 cut(s) | 199, 496, 1118, 1275 |
| CseI | GACGC | 2 cut(s) | 281, 1080 |
| Csp6I | GTAC | 2 cut(s) | 752, 1287 |
| CviAII | CATG | 7 cut(s) | 581, 625, 637, 944, 961, 1284, 1351 |
| CviQI | GTAC | 2 cut(s) | 752, 1287 |
| DdeI | CTNAG | 2 cut(s) | 1026, 1385 |
| DinI | GGCGCC | 1 cut(s) | 1212 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 329, 1116 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 329, 1116 |
| EaeI | YGGCCR | 5 cut(s) | 216, 236, 370, 389, 414 |
| EagI | CGGCCG | 1 cut(s) | 216 |
| Eam1104I | CTCTTC | 1 cut(s) | 798 |
| EarI | CTCTTC | 1 cut(s) | 798 |
| Ecl136II | GAGCTC | 1 cut(s) | 949 |
| EclXI | CGGCCG | 1 cut(s) | 216 |
| Eco24I | GRGCYC | 2 cut(s) | 277, 951 |
| Eco47I | GGWCC | 2 cut(s) | 496, 1118 |
| Eco52I | CGGCCG | 1 cut(s) | 216 |
| Eco53kI | GAGCTC | 1 cut(s) | 949 |
| Eco88I | CYCGRG | 2 cut(s) | 464, 1151 |
| EcoICRI | GAGCTC | 1 cut(s) | 949 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 668 |
| EcoRII | CCWGG | 1 cut(s) | 179 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| EcoT38I | GRGCYC | 2 cut(s) | 277, 951 |
| EgeI | GGCGCC | 1 cut(s) | 1212 |
| EheI | GGCGCC | 1 cut(s) | 1212 |
| Esp3I | CGTCTC | 1 cut(s) | 883 |
| FaeI | CATG | 7 cut(s) | 584, 628, 640, 947, 964, 1287, 1354 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 437, 469 |
| FaqI | GGGAC | 3 cut(s) | 242, 790, 1112 |
| FatI | CATG | 7 cut(s) | 580, 624, 636, 943, 960, 1283, 1350 |
| FauI | CCCGC | 1 cut(s) | 274 |
| Fnu4HI | GCNGC | 4 cut(s) | 156, 198, 290, 707 |
| FokI | GGATG | 2 cut(s) | 442, 530 |
| FriOI | GRGCYC | 2 cut(s) | 277, 951 |
| Fsp4HI | GCNGC | 4 cut(s) | 156, 198, 290, 707 |
| FspBI | CTAG | 3 cut(s) | 555, 1257, 1379 |
| GlaI | GCGC | 5 cut(s) | 478, 509, 1057, 1201, 1212 |
| GluI | GCNGC | 4 cut(s) | 156, 198, 290, 707 |
| GsuI | CTGGAG | 2 cut(s) | 163, 1058 |
| HaeII | RGCGCY | 1 cut(s) | 1214 |
| HaeIII | GGCC | 7 cut(s) | 200, 218, 238, 372, 391, 416, 1277 |
| HapII | CCGG | 8 cut(s) | 194, 215, 219, 242, 341, 388, 400, 413 |
| HgaI | GACGC | 2 cut(s) | 281, 1080 |
| HhaI | GCGC | 5 cut(s) | 479, 510, 1058, 1202, 1213 |
| Hin1I | GRCGYC | 1 cut(s) | 1211 |
| Hin1II | CATG | 7 cut(s) | 584, 628, 640, 947, 964, 1287, 1354 |
| Hin6I | GCGC | 5 cut(s) | 477, 508, 1056, 1200, 1211 |
| HinP1I | GCGC | 5 cut(s) | 477, 508, 1056, 1200, 1211 |
| HincII | GTYRAC | 2 cut(s) | 357, 378 |
| HindII | GTYRAC | 2 cut(s) | 357, 378 |
| HinfI | GANTC | 6 cut(s) | 184, 232, 644, 728, 859, 1040 |
| HpaII | CCGG | 8 cut(s) | 194, 215, 219, 242, 341, 388, 400, 413 |
| Hpy166II | GTNNAC | 3 cut(s) | 357, 378, 1165 |
| Hpy188I | TCNGA | 6 cut(s) | 322, 500, 561, 787, 909, 1013 |
| Hpy8I | GTNNAC | 3 cut(s) | 357, 378, 1165 |
| HpyAV | CCTTC | 1 cut(s) | 1136 |
| HpyCH4III | ACNGT | 1 cut(s) | 1174 |
| HpyCH4IV | ACGT | 8 cut(s) | 88, 312, 330, 564, 720, 928, 966, 1322 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 884, 923, 1165, 1307 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 281, 295, 315, 324, 333, 605, 1208 |
| HpyF3I | CTNAG | 2 cut(s) | 1026, 1385 |
| HpySE526I | ACGT | 8 cut(s) | 88, 312, 330, 564, 720, 928, 966, 1322 |
| Hsp92I | GRCGYC | 1 cut(s) | 1211 |
| Hsp92II | CATG | 7 cut(s) | 584, 628, 640, 947, 964, 1287, 1354 |
| HspAI | GCGC | 5 cut(s) | 477, 508, 1056, 1200, 1211 |
| KasI | GGCGCC | 1 cut(s) | 1210 |
| LguI | GCTCTTC | 1 cut(s) | 798 |
| LmnI | GCTCC | 6 cut(s) | 272, 323, 654, 962, 1078, 1225 |
| Lsp1109I | GCAGC | 1 cut(s) | 718 |
| MaeI | CTAG | 3 cut(s) | 555, 1257, 1379 |
| MaeII | ACGT | 8 cut(s) | 88, 312, 330, 564, 720, 928, 966, 1322 |
| MaeIII | GTNAC | 2 cut(s) | 434, 725 |
| MboII | GAAGA | 7 cut(s) | 179, 686, 785, 868, 1009, 1373, 1406 |
| MflI | RGATCY | 3 cut(s) | 169, 303, 1381 |
| MhlI | GDGCHC | 4 cut(s) | 277, 570, 951, 1167 |
| MluCI | AATT | 6 cut(s) | 57, 67, 618, 901, 1102, 1345 |
| Mly113I | GGCGCC | 1 cut(s) | 1211 |
| MlyI | GAGTC | 4 cut(s) | 193, 638, 722, 1049 |
| MmeI | TCCRAC | 1 cut(s) | 345 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MroXI | GAANNNNTTC | 1 cut(s) | 792 |
| MseI | TTAA | 3 cut(s) | 425, 519, 1435 |
| MslI | CAYNNNNRTG | 2 cut(s) | 639, 1239 |
| MspCI | CTTAAG | 1 cut(s) | 518 |
| MspI | CCGG | 8 cut(s) | 194, 215, 219, 242, 341, 388, 400, 413 |
| MspR9I | CCNGG | 2 cut(s) | 181, 341 |
| MvaI | CCWGG | 1 cut(s) | 181 |
| MvnI | CGCG | 3 cut(s) | 292, 1056, 1200 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 281, 295, 315, 324, 333, 605, 1208 |
| NarI | GGCGCC | 1 cut(s) | 1211 |
| NciI | CCSGG | 1 cut(s) | 341 |
| NlaIII | CATG | 7 cut(s) | 584, 628, 640, 947, 964, 1287, 1354 |
| NlaIV | GGNNCC | 7 cut(s) | 201, 274, 497, 958, 1171, 1212, 1227 |
| NmuCI | GTSAC | 1 cut(s) | 725 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 2 cut(s) | 584, 1287 |
| PaeI | GCATGC | 1 cut(s) | 584 |
| PaeR7I | CTCGAG | 1 cut(s) | 464 |
| PagI | TCATGA | 2 cut(s) | 624, 943 |
| PciI | ACATGT | 1 cut(s) | 1283 |
| PciSI | GCTCTTC | 1 cut(s) | 798 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 318, 1078 |
| PdmI | GAANNNNTTC | 1 cut(s) | 792 |
| PfeI | GAWTC | 2 cut(s) | 232, 859 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1421 |
| PfoI | TCCNGGA | 1 cut(s) | 179 |
| PkrI | GCNGC | 4 cut(s) | 157, 199, 291, 708 |
| PleI | GAGTC | 4 cut(s) | 192, 638, 722, 1048 |
| PluTI | GGCGCC | 1 cut(s) | 1214 |
| PpsI | GAGTC | 4 cut(s) | 192, 638, 722, 1048 |
| PscI | ACATGT | 1 cut(s) | 1283 |
| Psp124BI | GAGCTC | 1 cut(s) | 951 |
| Psp1406I | AACGTT | 1 cut(s) | 720 |
| Psp6I | CCWGG | 1 cut(s) | 179 |
| PspGI | CCWGG | 1 cut(s) | 179 |
| PspN4I | GGNNCC | 7 cut(s) | 201, 274, 497, 958, 1171, 1212, 1227 |
| PspPI | GGNCC | 4 cut(s) | 199, 496, 1118, 1275 |
| PsuI | RGATCY | 3 cut(s) | 169, 303, 1381 |
| RsaI | GTAC | 2 cut(s) | 753, 1288 |
| RsaNI | GTAC | 2 cut(s) | 752, 1287 |
| RseI | CAYNNNNRTG | 2 cut(s) | 639, 1239 |
| SacI | GAGCTC | 1 cut(s) | 951 |
| SapI | GCTCTTC | 1 cut(s) | 798 |
| SaqAI | TTAA | 3 cut(s) | 425, 519, 1435 |
| SatI | GCNGC | 4 cut(s) | 156, 198, 290, 707 |
| Sau96I | GGNCC | 4 cut(s) | 199, 496, 1118, 1275 |
| SchI | GAGTC | 4 cut(s) | 193, 638, 722, 1049 |
| ScrFI | CCNGG | 2 cut(s) | 181, 341 |
| SduI | GDGCHC | 4 cut(s) | 277, 570, 951, 1167 |
| SfcI | CTRYAG | 1 cut(s) | 1048 |
| SfoI | GGCGCC | 1 cut(s) | 1212 |
| Sfr274I | CTCGAG | 1 cut(s) | 464 |
| SinI | GGWCC | 2 cut(s) | 496, 1118 |
| SlaI | CTCGAG | 1 cut(s) | 464 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 639, 1239 |
| SmlI | CTYRAG | 3 cut(s) | 464, 518, 701 |
| SmoI | CTYRAG | 3 cut(s) | 464, 518, 701 |
| SphI | GCATGC | 1 cut(s) | 584 |
| Sse9I | AATT | 6 cut(s) | 57, 67, 618, 901, 1102, 1345 |
| SsiI | CCGC | 7 cut(s) | 153, 156, 197, 267, 290, 769, 1290 |
| SspDI | GGCGCC | 1 cut(s) | 1210 |
| SspI | AATATT | 1 cut(s) | 124 |
| SspMI | CTAG | 3 cut(s) | 555, 1257, 1379 |
| SstI | GAGCTC | 1 cut(s) | 951 |
| StyD4I | CCNGG | 2 cut(s) | 179, 339 |
| TaaI | ACNGT | 1 cut(s) | 1174 |
| TaiI | ACGT | 8 cut(s) | 91, 315, 333, 567, 723, 931, 969, 1325 |
| TaqI | TCGA | 4 cut(s) | 465, 852, 1216, 1252 |
| TasI | AATT | 6 cut(s) | 57, 67, 618, 901, 1102, 1345 |
| TauI | GCSGC | 3 cut(s) | 158, 200, 292 |
| TfiI | GAWTC | 2 cut(s) | 232, 859 |
| Tru1I | TTAA | 3 cut(s) | 425, 519, 1435 |
| Tru9I | TTAA | 3 cut(s) | 425, 519, 1435 |
| TscAI | CASTG | 1 cut(s) | 891 |
| TseFI | GTSAC | 1 cut(s) | 725 |
| TseI | GCWGC | 1 cut(s) | 706 |
| Tsp45I | GTSAC | 1 cut(s) | 725 |
| TspDTI | ATGAA | 4 cut(s) | 653, 672, 932, 977 |
| TspGWI | ACGGA | 1 cut(s) | 1182 |
| TspRI | CASTG | 1 cut(s) | 891 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1421 |
| Vha464I | CTTAAG | 1 cut(s) | 518 |
| VneI | GTGCAC | 1 cut(s) | 1163 |
| VpaK11BI | GGWCC | 2 cut(s) | 496, 1118 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 668 |
| XapI | RAATTY | 2 cut(s) | 57, 67 |
| XbaI | TCTAGA | 2 cut(s) | 1256, 1378 |
| XceI | RCATGY | 2 cut(s) | 584, 1287 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 687 |
| XhoI | CTCGAG | 1 cut(s) | 464 |
| XmnI | GAANNNNTTC | 1 cut(s) | 792 |
| XspI | CTAG | 3 cut(s) | 555, 1257, 1379 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |