Domain of unknown function (DUF4216)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 230 |
| Acc65I | GGTACC | 1 cut(s) | 252 |
| AccB1I | GGYRCC | 2 cut(s) | 252, 1621 |
| AccBSI | CCGCTC | 2 cut(s) | 680, 689 |
| AccI | GTMKAC | 2 cut(s) | 405, 1094 |
| AccII | CGCG | 2 cut(s) | 1663, 2168 |
| AciI | CCGC | 4 cut(s) | 678, 687, 692, 2290 |
| AclI | AACGTT | 1 cut(s) | 237 |
| AcsI | RAATTY | 3 cut(s) | 867, 1270, 2357 |
| AcuI | CTGAAG | 1 cut(s) | 1707 |
| AcvI | CACGTG | 1 cut(s) | 1466 |
| AcyI | GRCGYC | 1 cut(s) | 227 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 30, 111, 769, 1021, 1993, 2191 |
| AflII | CTTAAG | 1 cut(s) | 2018 |
| AhlI | ACTAGT | 2 cut(s) | 479, 980 |
| AjiI | CACGTC | 3 cut(s) | 1036, 2065, 2514 |
| AjnI | CCWGG | 2 cut(s) | 813, 954 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1698, 1730 |
| Alw21I | GWGCWC | 1 cut(s) | 625 |
| Alw26I | GTCTC | 3 cut(s) | 1961, 2425, 2520 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1646 |
| Ama87I | CYCGRG | 1 cut(s) | 2222 |
| AoxI | GGCC | 2 cut(s) | 646, 825 |
| ApeKI | GCWGC | 9 cut(s) | 554, 839, 1418, 1460, 1511, 1553, 2084, 2087, 2227 |
| ApoI | RAATTY | 3 cut(s) | 867, 1270, 2357 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2334 |
| Asp718I | GGTACC | 1 cut(s) | 252 |
| AspLEI | GCGC | 5 cut(s) | 1086, 1663, 1979, 2010, 2170 |
| AspS9I | GGNCC | 3 cut(s) | 21, 700, 1996 |
| AsuC2I | CCSGG | 1 cut(s) | 423 |
| AsuHPI | GGTGA | 6 cut(s) | 104, 437, 578, 641, 1199, 1331 |
| AsuII | TTCGAA | 1 cut(s) | 145 |
| AsuNHI | GCTAGC | 1 cut(s) | 274 |
| AvaI | CYCGRG | 1 cut(s) | 2222 |
| AvaII | GGWCC | 3 cut(s) | 21, 700, 1996 |
| BamHI | GGATCC | 2 cut(s) | 80, 2031 |
| BanI | GGYRCC | 2 cut(s) | 252, 1621 |
| BanII | GRGCYC | 1 cut(s) | 625 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 200, 232, 624, 656 |
| BbrPI | CACGTG | 1 cut(s) | 1466 |
| BbsI | GAAGAC | 5 cut(s) | 396, 1003, 1878, 2202, 2405 |
| Bbv12I | GWGCWC | 1 cut(s) | 625 |
| BbvI | GCAGC | 9 cut(s) | 566, 826, 1430, 1447, 1523, 1540, 2071, 2074, 2239 |
| BccI | CCATC | 5 cut(s) | 870, 2021, 2144, 2271, 2347 |
| BciT130I | CCWGG | 2 cut(s) | 815, 956 |
| BciVI | GTATCC | 1 cut(s) | 1976 |
| BcnI | CCSGG | 1 cut(s) | 423 |
| BcoDI | GTCTC | 3 cut(s) | 1961, 2425, 2520 |
| BcuI | ACTAGT | 2 cut(s) | 479, 980 |
| BfaI | CTAG | 7 cut(s) | 275, 480, 644, 981, 1616, 1964, 2466 |
| BfrI | CTTAAG | 1 cut(s) | 2018 |
| BfuI | GTATCC | 1 cut(s) | 1976 |
| BglII | AGATCT | 1 cut(s) | 397 |
| BisI | GCNGC | 9 cut(s) | 555, 840, 1419, 1461, 1512, 1554, 2085, 2088, 2228 |
| BlsI | GCNGC | 9 cut(s) | 556, 841, 1420, 1462, 1513, 1555, 2086, 2089, 2229 |
| Bme1390I | CCNGG | 3 cut(s) | 423, 815, 956 |
| Bme18I | GGWCC | 3 cut(s) | 21, 700, 1996 |
| BmeT110I | CYCGRG | 1 cut(s) | 2222 |
| BmgBI | CACGTC | 3 cut(s) | 1036, 2065, 2514 |
| BmgT120I | GGNCC | 3 cut(s) | 21, 700, 1996 |
| BmiI | GGNNCC | 6 cut(s) | 82, 254, 702, 1623, 1997, 2033 |
| BmrFI | CCNGG | 3 cut(s) | 423, 815, 956 |
| BmsI | GCATC | 6 cut(s) | 1071, 1447, 1540, 2023, 2459, 2481 |
| BmtI | GCTAGC | 1 cut(s) | 278 |
| BpiI | GAAGAC | 5 cut(s) | 396, 1003, 1878, 2202, 2405 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1942, 1974 |
| Bpu14I | TTCGAA | 1 cut(s) | 145 |
| BpuMI | CCSGG | 1 cut(s) | 423 |
| Bsa29I | ATCGAT | 1 cut(s) | 876 |
| BsaAI | YACGTR | 2 cut(s) | 463, 1466 |
| BsaBI | GATNNNNATC | 3 cut(s) | 417, 597, 1676 |
| BsaHI | GRCGYC | 1 cut(s) | 227 |
| BsaJI | CCNNGG | 1 cut(s) | 329 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1153, 1183 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 30, 111, 769, 1021, 1993, 2191 |
| Bse8I | GATNNNNATC | 3 cut(s) | 417, 597, 1676 |
| BseBI | CCWGG | 2 cut(s) | 815, 956 |
| BseCI | ATCGAT | 1 cut(s) | 876 |
| BseDI | CCNNGG | 1 cut(s) | 329 |
| BseGI | GGATG | 6 cut(s) | 325, 376, 598, 778, 1048, 1078 |
| BseJI | GATNNNNATC | 3 cut(s) | 417, 597, 1676 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 30, 111, 769, 1021, 1993, 2191 |
| BseMII | CTCAG | 3 cut(s) | 894, 1773, 2027 |
| BseRI | GAGGAG | 3 cut(s) | 1217, 1349, 2064 |
| BseXI | GCAGC | 9 cut(s) | 566, 826, 1430, 1447, 1523, 1540, 2071, 2074, 2239 |
| BsgI | GTGCAG | 1 cut(s) | 1446 |
| Bsh1236I | CGCG | 2 cut(s) | 1663, 2168 |
| BshFI | GGCC | 2 cut(s) | 648, 827 |
| BshNI | GGYRCC | 2 cut(s) | 252, 1621 |
| BshVI | ATCGAT | 1 cut(s) | 876 |
| BsiHKAI | GWGCWC | 1 cut(s) | 625 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2222 |
| BsiSI | CCGG | 1 cut(s) | 423 |
| BslFI | GGGAC | 2 cut(s) | 336, 1299 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 30, 111, 769, 1021, 1993, 2191 |
| BsmAI | GTCTC | 3 cut(s) | 1961, 2425, 2520 |
| BsmBI | CGTCTC | 2 cut(s) | 2425, 2520 |
| BsmFI | GGGAC | 2 cut(s) | 336, 1299 |
| BsmI | GAATGC | 1 cut(s) | 556 |
| BsnI | GGCC | 2 cut(s) | 648, 827 |
| BsoBI | CYCGRG | 1 cut(s) | 2222 |
| Bsp119I | TTCGAA | 1 cut(s) | 145 |
| Bsp1286I | GDGCHC | 1 cut(s) | 625 |
| Bsp1407I | TGTACA | 1 cut(s) | 1648 |
| BspACI | CCGC | 4 cut(s) | 678, 687, 692, 2290 |
| BspANI | GGCC | 2 cut(s) | 648, 827 |
| BspCNI | CTCAG | 3 cut(s) | 895, 1774, 2028 |
| BspDI | ATCGAT | 1 cut(s) | 876 |
| BspFNI | CGCG | 2 cut(s) | 1663, 2168 |
| BspHI | TCATGA | 2 cut(s) | 2145, 2485 |
| BspLI | GGNNCC | 6 cut(s) | 82, 254, 702, 1623, 1997, 2033 |
| BspOI | GCTAGC | 1 cut(s) | 278 |
| BspQI | GCTCTTC | 1 cut(s) | 1587 |
| BspT104I | TTCGAA | 1 cut(s) | 145 |
| BspT107I | GGYRCC | 2 cut(s) | 252, 1621 |
| BspTI | CTTAAG | 1 cut(s) | 2018 |
| BsrBI | CCGCTC | 2 cut(s) | 680, 689 |
| BsrGI | TGTACA | 1 cut(s) | 1648 |
| BssECI | CCNNGG | 1 cut(s) | 329 |
| BssNAI | GTATAC | 1 cut(s) | 1095 |
| BssNI | GRCGYC | 1 cut(s) | 227 |
| BssT1I | CCWWGG | 1 cut(s) | 329 |
| Bst1107I | GTATAC | 1 cut(s) | 1095 |
| Bst2UI | CCWGG | 2 cut(s) | 815, 956 |
| Bst4CI | ACNGT | 5 cut(s) | 158, 566, 1756, 1828, 1877 |
| Bst6I | CTCTTC | 3 cut(s) | 1587, 1683, 1858 |
| BstACI | GRCGYC | 1 cut(s) | 227 |
| BstAFI | CTTAAG | 1 cut(s) | 2018 |
| BstAUI | TGTACA | 1 cut(s) | 1648 |
| BstBAI | YACGTR | 2 cut(s) | 463, 1466 |
| BstBI | TTCGAA | 1 cut(s) | 145 |
| BstC8I | GCNNGC | 2 cut(s) | 276, 2012 |
| BstDEI | CTNAG | 5 cut(s) | 903, 1782, 2036, 2109, 2266 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2189 |
| BstF5I | GGATG | 6 cut(s) | 325, 376, 598, 778, 1048, 1078 |
| BstFNI | CGCG | 2 cut(s) | 1663, 2168 |
| BstHHI | GCGC | 5 cut(s) | 1086, 1663, 1979, 2010, 2170 |
| BstMAI | GTCTC | 3 cut(s) | 1961, 2425, 2520 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 284, 686, 824, 2096, 2105, 2126 |
| BstNI | CCWGG | 2 cut(s) | 815, 956 |
| BstNSI | RCATGY | 1 cut(s) | 1560 |
| BstSCI | CCNGG | 3 cut(s) | 421, 813, 954 |
| BstUI | CGCG | 2 cut(s) | 1663, 2168 |
| BstV1I | GCAGC | 9 cut(s) | 566, 826, 1430, 1447, 1523, 1540, 2071, 2074, 2239 |
| BstV2I | GAAGAC | 5 cut(s) | 396, 1003, 1878, 2202, 2405 |
| BstX2I | RGATCY | 3 cut(s) | 80, 397, 2031 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1136 |
| BstYI | RGATCY | 3 cut(s) | 80, 397, 2031 |
| BstZ17I | GTATAC | 1 cut(s) | 1095 |
| Bsu15I | ATCGAT | 1 cut(s) | 876 |
| BsuI | GTATCC | 1 cut(s) | 1976 |
| BsuRI | GGCC | 2 cut(s) | 648, 827 |
| BsuTUI | ATCGAT | 1 cut(s) | 876 |
| BtrI | CACGTC | 3 cut(s) | 1036, 2065, 2514 |
| BtsCI | GGATG | 6 cut(s) | 325, 376, 598, 778, 1048, 1078 |
| BtsIMutI | CAGTG | 1 cut(s) | 2376 |
| Cac8I | GCNNGC | 2 cut(s) | 276, 2012 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1646 |
| CciI | TCATGA | 2 cut(s) | 2145, 2485 |
| CfoI | GCGC | 5 cut(s) | 1086, 1663, 1979, 2010, 2170 |
| Cfr13I | GGNCC | 3 cut(s) | 21, 700, 1996 |
| ClaI | ATCGAT | 1 cut(s) | 876 |
| CseI | GACGC | 2 cut(s) | 449, 2174 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1088, 1123 |
| DdeI | CTNAG | 5 cut(s) | 903, 1782, 2036, 2109, 2266 |
| DraI | TTTAAA | 1 cut(s) | 172 |
| Eam1104I | CTCTTC | 3 cut(s) | 1587, 1683, 1858 |
| EarI | CTCTTC | 3 cut(s) | 1587, 1683, 1858 |
| Ecl136II | GAGCTC | 1 cut(s) | 623 |
| Eco130I | CCWWGG | 1 cut(s) | 329 |
| Eco24I | GRGCYC | 1 cut(s) | 625 |
| Eco47I | GGWCC | 3 cut(s) | 21, 700, 1996 |
| Eco53kI | GAGCTC | 1 cut(s) | 623 |
| Eco57I | CTGAAG | 1 cut(s) | 1707 |
| Eco72I | CACGTG | 1 cut(s) | 1466 |
| Eco88I | CYCGRG | 1 cut(s) | 2222 |
| EcoICRI | GAGCTC | 1 cut(s) | 623 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2189 |
| EcoRI | GAATTC | 1 cut(s) | 2357 |
| EcoRII | CCWGG | 2 cut(s) | 813, 954 |
| EcoT14I | CCWWGG | 1 cut(s) | 329 |
| EcoT22I | ATGCAT | 1 cut(s) | 2474 |
| EcoT38I | GRGCYC | 1 cut(s) | 625 |
| ErhI | CCWWGG | 1 cut(s) | 329 |
| Esp3I | CGTCTC | 2 cut(s) | 2425, 2520 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1937, 1969 |
| FaqI | GGGAC | 2 cut(s) | 336, 1299 |
| FauI | CCCGC | 2 cut(s) | 685, 694 |
| FblI | GTMKAC | 2 cut(s) | 405, 1094 |
| Fnu4HI | GCNGC | 9 cut(s) | 555, 840, 1419, 1461, 1512, 1554, 2085, 2088, 2228 |
| FokI | GGATG | 6 cut(s) | 312, 383, 605, 785, 1035, 1085 |
| FriOI | GRGCYC | 1 cut(s) | 625 |
| Fsp4HI | GCNGC | 9 cut(s) | 555, 840, 1419, 1461, 1512, 1554, 2085, 2088, 2228 |
| FspBI | CTAG | 7 cut(s) | 275, 480, 644, 981, 1616, 1964, 2466 |
| GlaI | GCGC | 5 cut(s) | 1085, 1662, 1978, 2009, 2169 |
| GluI | GCNGC | 9 cut(s) | 555, 840, 1419, 1461, 1512, 1554, 2085, 2088, 2228 |
| HaeIII | GGCC | 2 cut(s) | 648, 827 |
| HapII | CCGG | 1 cut(s) | 423 |
| HgaI | GACGC | 2 cut(s) | 449, 2174 |
| HhaI | GCGC | 5 cut(s) | 1086, 1663, 1979, 2010, 2170 |
| Hin1I | GRCGYC | 1 cut(s) | 227 |
| Hin6I | GCGC | 5 cut(s) | 1084, 1661, 1977, 2008, 2168 |
| HinP1I | GCGC | 5 cut(s) | 1084, 1661, 1977, 2008, 2168 |
| HincII | GTYRAC | 1 cut(s) | 852 |
| HindII | GTYRAC | 1 cut(s) | 852 |
| HindIII | AAGCTT | 1 cut(s) | 1814 |
| HpaI | GTTAAC | 1 cut(s) | 852 |
| HpaII | CCGG | 1 cut(s) | 423 |
| HphI | GGTGA | 6 cut(s) | 104, 437, 578, 641, 1199, 1331 |
| Hpy166II | GTNNAC | 8 cut(s) | 95, 406, 460, 852, 1027, 1095, 1831, 2366 |
| Hpy188I | TCNGA | 8 cut(s) | 193, 669, 759, 793, 1783, 1903, 2329, 2451 |
| Hpy8I | GTNNAC | 8 cut(s) | 95, 406, 460, 852, 1027, 1095, 1831, 2366 |
| Hpy99I | CGWCG | 1 cut(s) | 232 |
| HpyAV | CCTTC | 3 cut(s) | 1692, 1696, 2517 |
| HpyCH4III | ACNGT | 5 cut(s) | 158, 566, 1756, 1828, 1877 |
| HpyCH4IV | ACGT | 9 cut(s) | 227, 237, 462, 1035, 1465, 1791, 2064, 2241, 2513 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 284, 686, 824, 2096, 2105, 2126 |
| HpyF3I | CTNAG | 5 cut(s) | 903, 1782, 2036, 2109, 2266 |
| HpySE526I | ACGT | 9 cut(s) | 227, 237, 462, 1035, 1465, 1791, 2064, 2241, 2513 |
| Hsp92I | GRCGYC | 1 cut(s) | 227 |
| HspAI | GCGC | 5 cut(s) | 1084, 1661, 1977, 2008, 2168 |
| KpnI | GGTACC | 1 cut(s) | 256 |
| KspAI | GTTAAC | 1 cut(s) | 852 |
| LguI | GCTCTTC | 1 cut(s) | 1587 |
| LmnI | GCTCC | 5 cut(s) | 610, 694, 1744, 1963, 2175 |
| Lsp1109I | GCAGC | 9 cut(s) | 566, 826, 1430, 1447, 1523, 1540, 2071, 2074, 2239 |
| LweI | GCATC | 6 cut(s) | 1071, 1447, 1540, 2023, 2459, 2481 |
| MaeI | CTAG | 7 cut(s) | 275, 480, 644, 981, 1616, 1964, 2466 |
| MaeII | ACGT | 9 cut(s) | 227, 237, 462, 1035, 1465, 1791, 2064, 2241, 2513 |
| MaeIII | GTNAC | 4 cut(s) | 425, 1654, 1756, 1934 |
| MbiI | CCGCTC | 2 cut(s) | 680, 689 |
| MfeI | CAATTG | 5 cut(s) | 75, 1411, 1444, 1504, 1537 |
| MflI | RGATCY | 3 cut(s) | 80, 397, 2031 |
| MhlI | GDGCHC | 1 cut(s) | 625 |
| MlyI | GAGTC | 3 cut(s) | 124, 664, 2395 |
| MmeI | TCCRAC | 3 cut(s) | 588, 692, 1775 |
| Mph1103I | ATGCAT | 1 cut(s) | 2474 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2334 |
| MseI | TTAA | 9 cut(s) | 171, 233, 240, 851, 975, 1266, 1809, 2019, 2524 |
| MslI | CAYNNNNRTG | 5 cut(s) | 90, 414, 498, 2144, 2160 |
| MspA1I | CMGCKG | 1 cut(s) | 1772 |
| MspCI | CTTAAG | 1 cut(s) | 2018 |
| MspI | CCGG | 1 cut(s) | 423 |
| MspR9I | CCNGG | 3 cut(s) | 423, 815, 956 |
| MunI | CAATTG | 5 cut(s) | 75, 1411, 1444, 1504, 1537 |
| Mva1269I | GAATGC | 1 cut(s) | 556 |
| MvaI | CCWGG | 2 cut(s) | 815, 956 |
| MvnI | CGCG | 2 cut(s) | 1663, 2168 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 284, 686, 824, 2096, 2105, 2126 |
| NciI | CCSGG | 1 cut(s) | 423 |
| NheI | GCTAGC | 1 cut(s) | 274 |
| NlaIV | GGNNCC | 6 cut(s) | 82, 254, 702, 1623, 1997, 2033 |
| NmeAIII | GCCGAG | 1 cut(s) | 1067 |
| NmuCI | GTSAC | 1 cut(s) | 425 |
| NsiI | ATGCAT | 1 cut(s) | 2474 |
| NspI | RCATGY | 1 cut(s) | 1560 |
| NspV | TTCGAA | 1 cut(s) | 145 |
| PaeR7I | CTCGAG | 1 cut(s) | 2222 |
| PagI | TCATGA | 2 cut(s) | 2145, 2485 |
| PciSI | GCTCTTC | 1 cut(s) | 1587 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 679 |
| PctI | GAATGC | 1 cut(s) | 556 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2334 |
| PfeI | GAWTC | 8 cut(s) | 349, 584, 754, 1433, 1526, 1643, 1672, 1820 |
| PflFI | GACNNNGTC | 1 cut(s) | 1877 |
| PfoI | TCCNGGA | 1 cut(s) | 954 |
| PkrI | GCNGC | 9 cut(s) | 556, 841, 1420, 1462, 1513, 1555, 2086, 2089, 2229 |
| PleI | GAGTC | 3 cut(s) | 123, 664, 2395 |
| PmaCI | CACGTG | 1 cut(s) | 1466 |
| PmlI | CACGTG | 1 cut(s) | 1466 |
| PpsI | GAGTC | 3 cut(s) | 123, 664, 2395 |
| Ppu21I | YACGTR | 2 cut(s) | 463, 1466 |
| Psp124BI | GAGCTC | 1 cut(s) | 625 |
| Psp1406I | AACGTT | 1 cut(s) | 237 |
| Psp6I | CCWGG | 2 cut(s) | 813, 954 |
| PspCI | CACGTG | 1 cut(s) | 1466 |
| PspGI | CCWGG | 2 cut(s) | 813, 954 |
| PspN4I | GGNNCC | 6 cut(s) | 82, 254, 702, 1623, 1997, 2033 |
| PspPI | GGNCC | 3 cut(s) | 21, 700, 1996 |
| PspXI | VCTCGAGB | 1 cut(s) | 2222 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1646 |
| PsuI | RGATCY | 3 cut(s) | 80, 397, 2031 |
| PsyI | GACNNNGTC | 1 cut(s) | 1877 |
| PvuII | CAGCTG | 1 cut(s) | 1772 |
| RseI | CAYNNNNRTG | 5 cut(s) | 90, 414, 498, 2144, 2160 |
| SacI | GAGCTC | 1 cut(s) | 625 |
| SapI | GCTCTTC | 1 cut(s) | 1587 |
| SaqAI | TTAA | 9 cut(s) | 171, 233, 240, 851, 975, 1266, 1809, 2019, 2524 |
| SatI | GCNGC | 9 cut(s) | 555, 840, 1419, 1461, 1512, 1554, 2085, 2088, 2228 |
| Sau96I | GGNCC | 3 cut(s) | 21, 700, 1996 |
| SchI | GAGTC | 3 cut(s) | 124, 664, 2395 |
| ScrFI | CCNGG | 3 cut(s) | 423, 815, 956 |
| SduI | GDGCHC | 1 cut(s) | 625 |
| SfaNI | GCATC | 6 cut(s) | 1071, 1447, 1540, 2023, 2459, 2481 |
| Sfr274I | CTCGAG | 1 cut(s) | 2222 |
| SfuI | TTCGAA | 1 cut(s) | 145 |
| SinI | GGWCC | 3 cut(s) | 21, 700, 1996 |
| SlaI | CTCGAG | 1 cut(s) | 2222 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 90, 414, 498, 2144, 2160 |
| SmlI | CTYRAG | 2 cut(s) | 2018, 2222 |
| SmoI | CTYRAG | 2 cut(s) | 2018, 2222 |
| SpeI | ACTAGT | 2 cut(s) | 479, 980 |
| SsiI | CCGC | 4 cut(s) | 678, 687, 692, 2290 |
| SspMI | CTAG | 7 cut(s) | 275, 480, 644, 981, 1616, 1964, 2466 |
| SstI | GAGCTC | 1 cut(s) | 625 |
| StyD4I | CCNGG | 3 cut(s) | 421, 813, 954 |
| StyI | CCWWGG | 1 cut(s) | 329 |
| TaaI | ACNGT | 5 cut(s) | 158, 566, 1756, 1828, 1877 |
| TaiI | ACGT | 9 cut(s) | 230, 240, 465, 1038, 1468, 1794, 2067, 2244, 2516 |
| TaqI | TCGA | 9 cut(s) | 145, 682, 865, 876, 1150, 1196, 1328, 1573, 2223 |
| TatI | WGTACW | 5 cut(s) | 153, 158, 482, 1648, 2311 |
| TfiI | GAWTC | 8 cut(s) | 349, 584, 754, 1433, 1526, 1643, 1672, 1820 |
| Tru1I | TTAA | 9 cut(s) | 171, 233, 240, 851, 975, 1266, 1809, 2019, 2524 |
| Tru9I | TTAA | 9 cut(s) | 171, 233, 240, 851, 975, 1266, 1809, 2019, 2524 |
| TscAI | CASTG | 1 cut(s) | 2383 |
| TseFI | GTSAC | 1 cut(s) | 425 |
| TseI | GCWGC | 9 cut(s) | 554, 839, 1418, 1460, 1511, 1553, 2084, 2087, 2227 |
| Tsp45I | GTSAC | 1 cut(s) | 425 |
| TspGWI | ACGGA | 8 cut(s) | 13, 46, 605, 713, 975, 1905, 1988, 2234 |
| TspRI | CASTG | 1 cut(s) | 2383 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1877 |
| Vha464I | CTTAAG | 1 cut(s) | 2018 |
| VpaK11BI | GGWCC | 3 cut(s) | 21, 700, 1996 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2189 |
| XapI | RAATTY | 3 cut(s) | 867, 1270, 2357 |
| XceI | RCATGY | 1 cut(s) | 1560 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1179, 2208 |
| XhoI | CTCGAG | 1 cut(s) | 2222 |
| XmiI | GTMKAC | 2 cut(s) | 405, 1094 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2334 |
| XspI | CTAG | 7 cut(s) | 275, 480, 644, 981, 1616, 1964, 2466 |
| ZraI | GACGTC | 1 cut(s) | 228 |
| Zsp2I | ATGCAT | 1 cut(s) | 2474 |