zinc finger
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 5 cut(s) | 812, 938, 1181, 1217, 2367 |
| Acc36I | ACCTGC | 1 cut(s) | 2774 |
| AccB1I | GGYRCC | 1 cut(s) | 2543 |
| AccI | GTMKAC | 4 cut(s) | 1009, 1150, 3058, 3493 |
| AciI | CCGC | 5 cut(s) | 349, 793, 1104, 1474, 1868 |
| AclI | AACGTT | 1 cut(s) | 562 |
| AclWI | GGATC | 6 cut(s) | 592, 1608, 2151, 2864, 3432, 3445 |
| AcoI | YGGCCR | 1 cut(s) | 306 |
| AcuI | CTGAAG | 3 cut(s) | 1034, 1980, 2739 |
| AcvI | CACGTG | 1 cut(s) | 956 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 271, 2134, 2161, 2341 |
| AflIII | ACRYGT | 2 cut(s) | 77, 328 |
| AjnI | CCWGG | 4 cut(s) | 2389, 2628, 2844, 2910 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3284, 3316 |
| AleI | CACNNNNGTG | 1 cut(s) | 1363 |
| AluBI | AGCT | 6 cut(s) | 1563, 2089, 2658, 2690, 3109, 3468 |
| AluI | AGCT | 6 cut(s) | 1563, 2089, 2658, 2690, 3109, 3468 |
| Alw21I | GWGCWC | 1 cut(s) | 572 |
| Alw26I | GTCTC | 4 cut(s) | 316, 1492, 2172, 2530 |
| AlwI | GGATC | 6 cut(s) | 592, 1608, 2151, 2864, 3432, 3445 |
| Ama87I | CYCGRG | 2 cut(s) | 1154, 1952 |
| AoxI | GGCC | 3 cut(s) | 306, 2226, 2890 |
| ApeKI | GCWGC | 2 cut(s) | 950, 2565 |
| AseI | ATTAAT | 2 cut(s) | 107, 536 |
| AspS9I | GGNCC | 3 cut(s) | 97, 351, 2791 |
| AsuC2I | CCSGG | 1 cut(s) | 3435 |
| AsuHPI | GGTGA | 6 cut(s) | 1093, 1641, 1750, 2233, 2324, 2356 |
| AvaI | CYCGRG | 2 cut(s) | 1154, 1952 |
| AvaII | GGWCC | 3 cut(s) | 97, 351, 2791 |
| BamHI | GGATCC | 1 cut(s) | 3437 |
| BanI | GGYRCC | 1 cut(s) | 2543 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 486, 518, 2258, 2290 |
| BauI | CACGAG | 1 cut(s) | 2595 |
| BbrPI | CACGTG | 1 cut(s) | 956 |
| Bbv12I | GWGCWC | 1 cut(s) | 572 |
| BbvI | GCAGC | 2 cut(s) | 937, 2552 |
| BccI | CCATC | 3 cut(s) | 1737, 1770, 2192 |
| BceAI | ACGGC | 1 cut(s) | 293 |
| BciT130I | CCWGG | 4 cut(s) | 2391, 2630, 2846, 2912 |
| BciVI | GTATCC | 2 cut(s) | 508, 3239 |
| BclI | TGATCA | 2 cut(s) | 1395, 3391 |
| BcnI | CCSGG | 1 cut(s) | 3435 |
| BcoDI | GTCTC | 4 cut(s) | 316, 1492, 2172, 2530 |
| BfaI | CTAG | 8 cut(s) | 473, 1491, 1662, 1680, 1989, 2553, 2709, 2786 |
| BfuAI | ACCTGC | 1 cut(s) | 2774 |
| BfuI | GTATCC | 2 cut(s) | 508, 3239 |
| BglII | AGATCT | 1 cut(s) | 2290 |
| BisI | GCNGC | 2 cut(s) | 951, 2566 |
| BlsI | GCNGC | 2 cut(s) | 952, 2567 |
| BmcAI | AGTACT | 2 cut(s) | 1915, 2436 |
| Bme1390I | CCNGG | 5 cut(s) | 2391, 2630, 2846, 2912, 3435 |
| Bme18I | GGWCC | 3 cut(s) | 97, 351, 2791 |
| BmeT110I | CYCGRG | 2 cut(s) | 1154, 1952 |
| BmgT120I | GGNCC | 3 cut(s) | 97, 351, 2791 |
| BmiI | GGNNCC | 2 cut(s) | 2545, 3439 |
| BmrFI | CCNGG | 5 cut(s) | 2391, 2630, 2846, 2912, 3435 |
| BmrI | ACTGGG | 2 cut(s) | 470, 2764 |
| BmsI | GCATC | 6 cut(s) | 1630, 1674, 2213, 2813, 3103, 3438 |
| BmuI | ACTGGG | 2 cut(s) | 470, 2764 |
| BpuEI | CTTGAG | 3 cut(s) | 2196, 2795, 3089 |
| BpuMI | CCSGG | 1 cut(s) | 3435 |
| Bsa29I | ATCGAT | 1 cut(s) | 3199 |
| BsaAI | YACGTR | 2 cut(s) | 956, 1007 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2237 |
| BsaJI | CCNNGG | 1 cut(s) | 1596 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 559, 589, 2488, 2518, 3013, 3043, 3260, 3290 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 271, 2134, 2161, 2341 |
| Bse1I | ACTGG | 4 cut(s) | 465, 2423, 2617, 2759 |
| Bse3DI | GCAATG | 3 cut(s) | 486, 1465, 2242 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2237 |
| BseBI | CCWGG | 4 cut(s) | 2391, 2630, 2846, 2912 |
| BseCI | ATCGAT | 1 cut(s) | 3199 |
| BseDI | CCNNGG | 1 cut(s) | 1596 |
| BseGI | GGATG | 7 cut(s) | 1368, 1819, 2204, 2804, 2920, 3430, 3478 |
| BseJI | GATNNNNATC | 1 cut(s) | 2237 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 271, 2134, 2161, 2341 |
| BseMI | GCAATG | 3 cut(s) | 486, 1465, 2242 |
| BseMII | CTCAG | 2 cut(s) | 155, 201 |
| BseNI | ACTGG | 4 cut(s) | 465, 2423, 2617, 2759 |
| BseRI | GAGGAG | 1 cut(s) | 1611 |
| BseXI | GCAGC | 2 cut(s) | 937, 2552 |
| BsgI | GTGCAG | 1 cut(s) | 936 |
| BshFI | GGCC | 3 cut(s) | 308, 2228, 2892 |
| BshNI | GGYRCC | 1 cut(s) | 2543 |
| BshVI | ATCGAT | 1 cut(s) | 3199 |
| BsiHKAI | GWGCWC | 1 cut(s) | 572 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1154, 1952 |
| BsiSI | CCGG | 1 cut(s) | 3435 |
| BslFI | GGGAC | 1 cut(s) | 287 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 271, 2134, 2161, 2341 |
| BsmAI | GTCTC | 4 cut(s) | 316, 1492, 2172, 2530 |
| BsmBI | CGTCTC | 1 cut(s) | 316 |
| BsmFI | GGGAC | 1 cut(s) | 287 |
| BsmI | GAATGC | 2 cut(s) | 1294, 2567 |
| BsnI | GGCC | 3 cut(s) | 308, 2228, 2892 |
| BsoBI | CYCGRG | 2 cut(s) | 1154, 1952 |
| Bsp1286I | GDGCHC | 1 cut(s) | 572 |
| Bsp1407I | TGTACA | 2 cut(s) | 248, 3296 |
| BspACI | CCGC | 5 cut(s) | 349, 793, 1104, 1474, 1868 |
| BspANI | GGCC | 3 cut(s) | 308, 2228, 2892 |
| BspCNI | CTCAG | 2 cut(s) | 156, 202 |
| BspDI | ATCGAT | 1 cut(s) | 3199 |
| BspLI | GGNNCC | 2 cut(s) | 2545, 3439 |
| BspMI | ACCTGC | 1 cut(s) | 2774 |
| BspPI | GGATC | 6 cut(s) | 592, 1608, 2151, 2864, 3432, 3445 |
| BspQI | GCTCTTC | 1 cut(s) | 2261 |
| BspT107I | GGYRCC | 1 cut(s) | 2543 |
| BsrDI | GCAATG | 3 cut(s) | 486, 1465, 2242 |
| BsrGI | TGTACA | 2 cut(s) | 248, 3296 |
| BsrI | ACTGG | 4 cut(s) | 465, 2423, 2617, 2759 |
| BssECI | CCNNGG | 1 cut(s) | 1596 |
| BssSI | CACGAG | 1 cut(s) | 2595 |
| BssT1I | CCWWGG | 1 cut(s) | 1596 |
| Bst2BI | CACGAG | 1 cut(s) | 2595 |
| Bst2UI | CCWGG | 4 cut(s) | 2391, 2630, 2846, 2912 |
| Bst4CI | ACNGT | 6 cut(s) | 157, 1124, 1609, 2344, 3370, 3422 |
| Bst6I | CTCTTC | 1 cut(s) | 2261 |
| BstAUI | TGTACA | 2 cut(s) | 248, 3296 |
| BstBAI | YACGTR | 2 cut(s) | 956, 1007 |
| BstDEI | CTNAG | 5 cut(s) | 101, 164, 210, 2174, 2492 |
| BstF5I | GGATG | 7 cut(s) | 1368, 1819, 2204, 2804, 2920, 3430, 3478 |
| BstMAI | GTCTC | 4 cut(s) | 316, 1492, 2172, 2530 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1633, 2081 |
| BstNI | CCWGG | 4 cut(s) | 2391, 2630, 2846, 2912 |
| BstNSI | RCATGY | 5 cut(s) | 81, 332, 1533, 3151, 3409 |
| BstSCI | CCNGG | 5 cut(s) | 2389, 2628, 2844, 2910, 3433 |
| BstSNI | TACGTA | 1 cut(s) | 1007 |
| BstV1I | GCAGC | 2 cut(s) | 937, 2552 |
| BstX2I | RGATCY | 3 cut(s) | 1600, 2290, 3437 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 290, 2738 |
| BstYI | RGATCY | 3 cut(s) | 1600, 2290, 3437 |
| Bsu15I | ATCGAT | 1 cut(s) | 3199 |
| BsuI | GTATCC | 2 cut(s) | 508, 3239 |
| BsuRI | GGCC | 3 cut(s) | 308, 2228, 2892 |
| BsuTUI | ATCGAT | 1 cut(s) | 3199 |
| BtgZI | GCGATG | 1 cut(s) | 1015 |
| BtsCI | GGATG | 7 cut(s) | 1368, 1819, 2204, 2804, 2920, 3430, 3478 |
| BtsIMutI | CAGTG | 3 cut(s) | 130, 1920, 2752 |
| BveI | ACCTGC | 1 cut(s) | 2774 |
| Cfr13I | GGNCC | 3 cut(s) | 97, 351, 2791 |
| ClaI | ATCGAT | 1 cut(s) | 3199 |
| CseI | GACGC | 1 cut(s) | 1020 |
| CsiI | ACCWGGT | 1 cut(s) | 2628 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2961, 2996 |
| DdeI | CTNAG | 5 cut(s) | 101, 164, 210, 2174, 2492 |
| DraI | TTTAAA | 4 cut(s) | 181, 1065, 3226, 3240 |
| EaeI | YGGCCR | 1 cut(s) | 306 |
| Eam1104I | CTCTTC | 1 cut(s) | 2261 |
| EarI | CTCTTC | 1 cut(s) | 2261 |
| Eco105I | TACGTA | 1 cut(s) | 1007 |
| Eco130I | CCWWGG | 1 cut(s) | 1596 |
| Eco47I | GGWCC | 3 cut(s) | 97, 351, 2791 |
| Eco57I | CTGAAG | 3 cut(s) | 1034, 1980, 2739 |
| Eco72I | CACGTG | 1 cut(s) | 956 |
| Eco88I | CYCGRG | 2 cut(s) | 1154, 1952 |
| EcoRI | GAATTC | 1 cut(s) | 1993 |
| EcoRII | CCWGG | 4 cut(s) | 2389, 2628, 2844, 2910 |
| EcoT14I | CCWWGG | 1 cut(s) | 1596 |
| EcoT22I | ATGCAT | 3 cut(s) | 1302, 2206, 3187 |
| ErhI | CCWWGG | 1 cut(s) | 1596 |
| Esp3I | CGTCTC | 1 cut(s) | 316 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 286, 318 |
| FaqI | GGGAC | 1 cut(s) | 287 |
| FauI | CCCGC | 1 cut(s) | 1481 |
| FauNDI | CATATG | 3 cut(s) | 1296, 1632, 2694 |
| FbaI | TGATCA | 2 cut(s) | 1395, 3391 |
| FblI | GTMKAC | 4 cut(s) | 1009, 1150, 3058, 3493 |
| Fnu4HI | GCNGC | 2 cut(s) | 951, 2566 |
| FokI | GGATG | 7 cut(s) | 1375, 1806, 2191, 2791, 2927, 3417, 3465 |
| Fsp4HI | GCNGC | 2 cut(s) | 951, 2566 |
| FspBI | CTAG | 8 cut(s) | 473, 1491, 1662, 1680, 1989, 2553, 2709, 2786 |
| GluI | GCNGC | 2 cut(s) | 951, 2566 |
| HaeIII | GGCC | 3 cut(s) | 308, 2228, 2892 |
| HapII | CCGG | 1 cut(s) | 3435 |
| HgaI | GACGC | 1 cut(s) | 1020 |
| HindIII | AAGCTT | 1 cut(s) | 3107 |
| HinfI | GANTC | 8 cut(s) | 339, 1352, 1544, 2151, 2347, 2605, 2724, 3028 |
| HpaII | CCGG | 1 cut(s) | 3435 |
| HphI | GGTGA | 6 cut(s) | 1093, 1641, 1750, 2233, 2324, 2356 |
| Hpy188I | TCNGA | 6 cut(s) | 165, 318, 344, 527, 1053, 1084 |
| HpyCH4III | ACNGT | 6 cut(s) | 157, 1124, 1609, 2344, 3370, 3422 |
| HpyCH4IV | ACGT | 4 cut(s) | 562, 955, 1006, 3235 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1633, 2081 |
| HpyF3I | CTNAG | 5 cut(s) | 101, 164, 210, 2174, 2492 |
| HpySE526I | ACGT | 4 cut(s) | 562, 955, 1006, 3235 |
| Ksp22I | TGATCA | 2 cut(s) | 1395, 3391 |
| LguI | GCTCTTC | 1 cut(s) | 2261 |
| LmnI | GCTCC | 1 cut(s) | 567 |
| Lsp1109I | GCAGC | 2 cut(s) | 937, 2552 |
| LweI | GCATC | 6 cut(s) | 1630, 1674, 2213, 2813, 3103, 3438 |
| MabI | ACCWGGT | 1 cut(s) | 2628 |
| MaeI | CTAG | 8 cut(s) | 473, 1491, 1662, 1680, 1989, 2553, 2709, 2786 |
| MaeII | ACGT | 4 cut(s) | 562, 955, 1006, 3235 |
| MaeIII | GTNAC | 7 cut(s) | 188, 633, 651, 901, 2675, 3131, 3150 |
| MboII | GAAGA | 7 cut(s) | 1040, 1347, 1892, 2278, 2300, 2422, 2583 |
| MfeI | CAATTG | 3 cut(s) | 735, 2404, 2894 |
| MflI | RGATCY | 3 cut(s) | 1600, 2290, 3437 |
| MhlI | GDGCHC | 1 cut(s) | 572 |
| MlyI | GAGTC | 3 cut(s) | 1538, 2733, 3022 |
| MmeI | TCCRAC | 4 cut(s) | 271, 545, 550, 1574 |
| Mph1103I | ATGCAT | 3 cut(s) | 1302, 2206, 3187 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1076, 1363, 2112, 2253, 2736, 3446 |
| MspI | CCGG | 1 cut(s) | 3435 |
| MspR9I | CCNGG | 5 cut(s) | 2391, 2630, 2846, 2912, 3435 |
| MunI | CAATTG | 3 cut(s) | 735, 2404, 2894 |
| Mva1269I | GAATGC | 2 cut(s) | 1294, 2567 |
| MvaI | CCWGG | 4 cut(s) | 2391, 2630, 2846, 2912 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1633, 2081 |
| NciI | CCSGG | 1 cut(s) | 3435 |
| NdeI | CATATG | 3 cut(s) | 1296, 1632, 2694 |
| NlaIV | GGNNCC | 2 cut(s) | 2545, 3439 |
| NmuCI | GTSAC | 2 cut(s) | 633, 2675 |
| NsiI | ATGCAT | 3 cut(s) | 1302, 2206, 3187 |
| NspI | RCATGY | 5 cut(s) | 81, 332, 1533, 3151, 3409 |
| OliI | CACNNNNGTG | 1 cut(s) | 1363 |
| PaeR7I | CTCGAG | 2 cut(s) | 1154, 1952 |
| PciI | ACATGT | 2 cut(s) | 77, 328 |
| PciSI | GCTCTTC | 1 cut(s) | 2261 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3205 |
| PctI | GAATGC | 2 cut(s) | 1294, 2567 |
| PfeI | GAWTC | 5 cut(s) | 339, 1352, 2151, 2347, 2605 |
| PfoI | TCCNGGA | 2 cut(s) | 2389, 3433 |
| PkrI | GCNGC | 2 cut(s) | 952, 2567 |
| PleI | GAGTC | 3 cut(s) | 1538, 2732, 3022 |
| PmaCI | CACGTG | 1 cut(s) | 956 |
| PmlI | CACGTG | 1 cut(s) | 956 |
| PpsI | GAGTC | 3 cut(s) | 1538, 2732, 3022 |
| Ppu21I | YACGTR | 2 cut(s) | 956, 1007 |
| PscI | ACATGT | 2 cut(s) | 77, 328 |
| PshBI | ATTAAT | 2 cut(s) | 107, 536 |
| PsiI | TTATAA | 5 cut(s) | 812, 938, 1181, 1217, 2367 |
| Psp1406I | AACGTT | 1 cut(s) | 562 |
| Psp6I | CCWGG | 4 cut(s) | 2389, 2628, 2844, 2910 |
| PspCI | CACGTG | 1 cut(s) | 956 |
| PspGI | CCWGG | 4 cut(s) | 2389, 2628, 2844, 2910 |
| PspN4I | GGNNCC | 2 cut(s) | 2545, 3439 |
| PspPI | GGNCC | 3 cut(s) | 97, 351, 2791 |
| PspXI | VCTCGAGB | 1 cut(s) | 1154 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2891, 2923 |
| PsuI | RGATCY | 3 cut(s) | 1600, 2290, 3437 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1076, 1363, 2112, 2253, 2736, 3446 |
| SapI | GCTCTTC | 1 cut(s) | 2261 |
| SatI | GCNGC | 2 cut(s) | 951, 2566 |
| Sau96I | GGNCC | 3 cut(s) | 97, 351, 2791 |
| ScaI | AGTACT | 2 cut(s) | 1915, 2436 |
| SchI | GAGTC | 3 cut(s) | 1538, 2733, 3022 |
| ScrFI | CCNGG | 5 cut(s) | 2391, 2630, 2846, 2912, 3435 |
| SduI | GDGCHC | 1 cut(s) | 572 |
| SexAI | ACCWGGT | 1 cut(s) | 2628 |
| SfaNI | GCATC | 6 cut(s) | 1630, 1674, 2213, 2813, 3103, 3438 |
| Sfr274I | CTCGAG | 2 cut(s) | 1154, 1952 |
| SinI | GGWCC | 3 cut(s) | 97, 351, 2791 |
| SlaI | CTCGAG | 2 cut(s) | 1154, 1952 |
| SmiI | ATTTAAAT | 1 cut(s) | 1065 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1076, 1363, 2112, 2253, 2736, 3446 |
| SmlI | CTYRAG | 5 cut(s) | 1154, 1952, 2211, 2810, 3104 |
| SmoI | CTYRAG | 5 cut(s) | 1154, 1952, 2211, 2810, 3104 |
| SnaBI | TACGTA | 1 cut(s) | 1007 |
| SsiI | CCGC | 5 cut(s) | 349, 793, 1104, 1474, 1868 |
| SspI | AATATT | 6 cut(s) | 16, 3047, 3099, 3142, 3168, 3253 |
| SspMI | CTAG | 8 cut(s) | 473, 1491, 1662, 1680, 1989, 2553, 2709, 2786 |
| StyD4I | CCNGG | 5 cut(s) | 2389, 2628, 2844, 2910, 3433 |
| StyI | CCWWGG | 1 cut(s) | 1596 |
| SwaI | ATTTAAAT | 1 cut(s) | 1065 |
| TaaI | ACNGT | 6 cut(s) | 157, 1124, 1609, 2344, 3370, 3422 |
| TaiI | ACGT | 4 cut(s) | 565, 958, 1009, 3238 |
| TaqII | GACCGA | 1 cut(s) | 565 |
| TatI | WGTACW | 9 cut(s) | 248, 356, 575, 1332, 1913, 2434, 2495, 3267, 3296 |
| TfiI | GAWTC | 5 cut(s) | 339, 1352, 2151, 2347, 2605 |
| TscAI | CASTG | 3 cut(s) | 130, 1927, 2759 |
| TseFI | GTSAC | 2 cut(s) | 633, 2675 |
| TseI | GCWGC | 2 cut(s) | 950, 2565 |
| Tsp45I | GTSAC | 2 cut(s) | 633, 2675 |
| TspGWI | ACGGA | 2 cut(s) | 257, 1375 |
| TspRI | CASTG | 3 cut(s) | 130, 1927, 2759 |
| VpaK11BI | GGWCC | 3 cut(s) | 97, 351, 2791 |
| VspI | ATTAAT | 2 cut(s) | 107, 536 |
| XbaI | TCTAGA | 2 cut(s) | 472, 2708 |
| XceI | RCATGY | 5 cut(s) | 81, 332, 1533, 3151, 3409 |
| XhoI | CTCGAG | 2 cut(s) | 1154, 1952 |
| XmiI | GTMKAC | 4 cut(s) | 1009, 1150, 3058, 3493 |
| XspI | CTAG | 8 cut(s) | 473, 1491, 1662, 1680, 1989, 2553, 2709, 2786 |
| ZrmI | AGTACT | 2 cut(s) | 1915, 2436 |
| Zsp2I | ATGCAT | 3 cut(s) | 1302, 2206, 3187 |