gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 179 |
| AclWI | GGATC | 1 cut(s) | 12 |
| AcsI | RAATTY | 1 cut(s) | 46 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 103 |
| AgsI | TTSAA | 2 cut(s) | 235, 269 |
| AluBI | AGCT | 1 cut(s) | 191 |
| AluI | AGCT | 1 cut(s) | 191 |
| AlwI | GGATC | 1 cut(s) | 12 |
| AoxI | GGCC | 2 cut(s) | 105, 146 |
| ApaI | GGGCCC | 1 cut(s) | 109 |
| ApoI | RAATTY | 1 cut(s) | 46 |
| AspLEI | GCGC | 1 cut(s) | 213 |
| AspS9I | GGNCC | 3 cut(s) | 105, 106, 146 |
| BaeGI | GKGCMC | 1 cut(s) | 109 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 1 cut(s) | 109 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 227, 259 |
| BccI | CCATC | 3 cut(s) | 155, 225, 231 |
| BmgT120I | GGNCC | 3 cut(s) | 105, 106, 146 |
| BmiI | GGNNCC | 2 cut(s) | 6, 107 |
| BmsI | GCATC | 1 cut(s) | 103 |
| Bpu10I | CCTNAGC | 1 cut(s) | 192 |
| BsaJI | CCNNGG | 1 cut(s) | 142 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 103 |
| BseDI | CCNNGG | 1 cut(s) | 142 |
| BseGI | GGATG | 1 cut(s) | 166 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 103 |
| BseMII | CTCAG | 1 cut(s) | 183 |
| BseSI | GKGCMC | 1 cut(s) | 109 |
| BshFI | GGCC | 2 cut(s) | 107, 148 |
| BslFI | GGGAC | 1 cut(s) | 160 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 103 |
| BsmFI | GGGAC | 1 cut(s) | 160 |
| BsnI | GGCC | 2 cut(s) | 107, 148 |
| Bsp120I | GGGCCC | 1 cut(s) | 105 |
| Bsp1286I | GDGCHC | 1 cut(s) | 109 |
| Bsp143I | GATC | 1 cut(s) | 4 |
| BspACI | CCGC | 1 cut(s) | 179 |
| BspANI | GGCC | 2 cut(s) | 107, 148 |
| BspCNI | CTCAG | 1 cut(s) | 182 |
| BspLI | GGNNCC | 2 cut(s) | 6, 107 |
| BspPI | GGATC | 1 cut(s) | 12 |
| BssECI | CCNNGG | 1 cut(s) | 142 |
| BssMI | GATC | 1 cut(s) | 4 |
| BssT1I | CCWWGG | 1 cut(s) | 142 |
| Bst4CI | ACNGT | 1 cut(s) | 253 |
| BstDEI | CTNAG | 2 cut(s) | 169, 192 |
| BstF5I | GGATG | 1 cut(s) | 166 |
| BstHHI | GCGC | 1 cut(s) | 213 |
| BstKTI | GATC | 1 cut(s) | 7 |
| BstMBI | GATC | 1 cut(s) | 4 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 113 |
| BstSLI | GKGCMC | 1 cut(s) | 109 |
| BstX2I | RGATCY | 1 cut(s) | 4 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 143 |
| BstYI | RGATCY | 1 cut(s) | 4 |
| BsuRI | GGCC | 2 cut(s) | 107, 148 |
| BtsCI | GGATG | 1 cut(s) | 166 |
| CfoI | GCGC | 1 cut(s) | 213 |
| Cfr13I | GGNCC | 3 cut(s) | 105, 106, 146 |
| CseI | GACGC | 1 cut(s) | 162 |
| CviJI | RGCY | 5 cut(s) | 107, 134, 148, 191, 197 |
| CviKI_1 | RGCY | 5 cut(s) | 107, 134, 148, 191, 197 |
| DdeI | CTNAG | 2 cut(s) | 169, 192 |
| DpnI | GATC | 1 cut(s) | 6 |
| DpnII | GATC | 1 cut(s) | 4 |
| Eco130I | CCWWGG | 1 cut(s) | 142 |
| Eco24I | GRGCYC | 1 cut(s) | 109 |
| EcoO109I | RGGNCCY | 1 cut(s) | 106 |
| EcoT14I | CCWWGG | 1 cut(s) | 142 |
| EcoT38I | GRGCYC | 1 cut(s) | 109 |
| ErhI | CCWWGG | 1 cut(s) | 142 |
| FaiI | YATR | 3 cut(s) | 14, 200, 274 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 249, 281 |
| FaqI | GGGAC | 1 cut(s) | 160 |
| FauI | CCCGC | 1 cut(s) | 186 |
| FokI | GGATG | 1 cut(s) | 173 |
| FriOI | GRGCYC | 1 cut(s) | 109 |
| GlaI | GCGC | 1 cut(s) | 212 |
| HaeIII | GGCC | 2 cut(s) | 107, 148 |
| HgaI | GACGC | 1 cut(s) | 162 |
| HhaI | GCGC | 1 cut(s) | 213 |
| Hin6I | GCGC | 1 cut(s) | 211 |
| HinP1I | GCGC | 1 cut(s) | 211 |
| HinfI | GANTC | 1 cut(s) | 121 |
| Hpy188III | TCNNGA | 1 cut(s) | 128 |
| HpyAV | CCTTC | 1 cut(s) | 229 |
| HpyCH4III | ACNGT | 1 cut(s) | 253 |
| HpyCH4V | TGCA | 1 cut(s) | 116 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 113 |
| HpyF3I | CTNAG | 2 cut(s) | 169, 192 |
| HspAI | GCGC | 1 cut(s) | 211 |
| Kzo9I | GATC | 1 cut(s) | 4 |
| LpnPI | CCDG | 5 cut(s) | 19, 69, 110, 212, 264 |
| LweI | GCATC | 1 cut(s) | 103 |
| MalI | GATC | 1 cut(s) | 6 |
| MboI | GATC | 1 cut(s) | 4 |
| MboII | GAAGA | 2 cut(s) | 14, 49 |
| MflI | RGATCY | 1 cut(s) | 4 |
| MhlI | GDGCHC | 1 cut(s) | 109 |
| MluCI | AATT | 2 cut(s) | 46, 56 |
| MnlI | CCTC | 1 cut(s) | 27 |
| MseI | TTAA | 1 cut(s) | 248 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 113 |
| NdeII | GATC | 1 cut(s) | 4 |
| NlaIV | GGNNCC | 2 cut(s) | 6, 107 |
| PfeI | GAWTC | 1 cut(s) | 121 |
| PspN4I | GGNNCC | 2 cut(s) | 6, 107 |
| PspOMI | GGGCCC | 1 cut(s) | 105 |
| PspPI | GGNCC | 3 cut(s) | 105, 106, 146 |
| PsuI | RGATCY | 1 cut(s) | 4 |
| SaqAI | TTAA | 1 cut(s) | 248 |
| Sau3AI | GATC | 1 cut(s) | 4 |
| Sau96I | GGNCC | 3 cut(s) | 105, 106, 146 |
| SduI | GDGCHC | 1 cut(s) | 109 |
| SetI | ASST | 5 cut(s) | 19, 99, 144, 193, 283 |
| SfaNI | GCATC | 1 cut(s) | 103 |
| Sse9I | AATT | 2 cut(s) | 46, 56 |
| SsiI | CCGC | 1 cut(s) | 179 |
| StyI | CCWWGG | 1 cut(s) | 142 |
| TaaI | ACNGT | 1 cut(s) | 253 |
| TaqI | TCGA | 1 cut(s) | 129 |
| TasI | AATT | 2 cut(s) | 46, 56 |
| TfiI | GAWTC | 1 cut(s) | 121 |
| Tru1I | TTAA | 1 cut(s) | 248 |
| Tru9I | TTAA | 1 cut(s) | 248 |
| TspDTI | ATGAA | 2 cut(s) | 14, 113 |
| XapI | RAATTY | 1 cut(s) | 46 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 270 |