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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 161, 1029, 1074 |
| AarI | CACCTGC | 2 cut(s) | 500, 612 |
| Acc36I | ACCTGC | 5 cut(s) | 466, 500, 518, 575, 612 |
| Acc65I | GGTACC | 1 cut(s) | 694 |
| AccB1I | GGYRCC | 3 cut(s) | 694, 1250, 1271 |
| AccI | GTMKAC | 2 cut(s) | 823, 847 |
| AccII | CGCG | 1 cut(s) | 48 |
| AclWI | GGATC | 2 cut(s) | 632, 962 |
| AcoI | YGGCCR | 2 cut(s) | 304, 622 |
| AcuI | CTGAAG | 3 cut(s) | 257, 273, 957 |
| AcvI | CACGTG | 1 cut(s) | 1193 |
| AcyI | GRCGYC | 1 cut(s) | 1251 |
| AdeI | CACNNNGTG | 2 cut(s) | 1196, 1310 |
| AfaI | GTAC | 5 cut(s) | 120, 222, 696, 934, 1106 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1088, 1089, 1159, 1212 |
| AflIII | ACRYGT | 2 cut(s) | 1190, 1208 |
| AgsI | TTSAA | 4 cut(s) | 751, 758, 787, 1035 |
| AjnI | CCWGG | 4 cut(s) | 111, 171, 517, 1158 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 699, 731 |
| AluBI | AGCT | 5 cut(s) | 654, 688, 815, 871, 995 |
| AluI | AGCT | 5 cut(s) | 654, 688, 815, 871, 995 |
| Alw21I | GWGCWC | 2 cut(s) | 1306, 1315 |
| Alw26I | GTCTC | 1 cut(s) | 292 |
| Alw44I | GTGCAC | 2 cut(s) | 1302, 1311 |
| AlwI | GGATC | 2 cut(s) | 632, 962 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 326, 363, 451 |
| AoxI | GGCC | 6 cut(s) | 195, 265, 304, 622, 1037, 1138 |
| ApaI | GGGCCC | 1 cut(s) | 1142 |
| ApaLI | GTGCAC | 2 cut(s) | 1302, 1311 |
| ApeKI | GCWGC | 9 cut(s) | 310, 320, 329, 339, 357, 404, 413, 416, 451 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 816 |
| Asp718I | GGTACC | 1 cut(s) | 694 |
| AspA2I | CCTAGG | 1 cut(s) | 1283 |
| AspLEI | GCGC | 3 cut(s) | 774, 1095, 1253 |
| AspS9I | GGNCC | 4 cut(s) | 266, 1038, 1138, 1139 |
| AsuHPI | GGTGA | 2 cut(s) | 203, 434 |
| AsuII | TTCGAA | 1 cut(s) | 18 |
| AvrII | CCTAGG | 1 cut(s) | 1283 |
| BaeGI | GKGCMC | 3 cut(s) | 1142, 1306, 1315 |
| BanI | GGYRCC | 3 cut(s) | 694, 1250, 1271 |
| BanII | GRGCYC | 1 cut(s) | 1142 |
| BauI | CACGAG | 1 cut(s) | 958 |
| BbrPI | CACGTG | 1 cut(s) | 1193 |
| Bbv12I | GWGCWC | 2 cut(s) | 1306, 1315 |
| BbvCI | CCTCAGC | 1 cut(s) | 371 |
| BbvI | GCAGC | 9 cut(s) | 316, 322, 332, 351, 369, 400, 403, 416, 438 |
| BceAI | ACGGC | 1 cut(s) | 1224 |
| BciT130I | CCWGG | 4 cut(s) | 113, 173, 519, 1160 |
| BciVI | GTATCC | 2 cut(s) | 1180, 1241 |
| BcoDI | GTCTC | 1 cut(s) | 292 |
| BfaI | CTAG | 4 cut(s) | 213, 704, 1236, 1284 |
| BfmI | CTRYAG | 5 cut(s) | 318, 337, 355, 575, 990 |
| BfoI | RGCGCY | 1 cut(s) | 1254 |
| BfuAI | ACCTGC | 5 cut(s) | 466, 500, 518, 575, 612 |
| BfuI | GTATCC | 2 cut(s) | 1180, 1241 |
| BlnI | CCTAGG | 1 cut(s) | 1283 |
| Bme1390I | CCNGG | 4 cut(s) | 113, 173, 519, 1160 |
| BmgT120I | GGNCC | 4 cut(s) | 266, 1038, 1138, 1139 |
| BmiI | GGNNCC | 4 cut(s) | 696, 1140, 1252, 1273 |
| BmrFI | CCNGG | 4 cut(s) | 113, 173, 519, 1160 |
| BmrI | ACTGGG | 1 cut(s) | 263 |
| BmsI | GCATC | 1 cut(s) | 273 |
| BmuI | ACTGGG | 1 cut(s) | 263 |
| Bpu10I | CCTNAGC | 1 cut(s) | 371 |
| Bpu14I | TTCGAA | 1 cut(s) | 18 |
| BpuEI | CTTGAG | 1 cut(s) | 653 |
| BsaAI | YACGTR | 2 cut(s) | 1193, 1211 |
| BsaHI | GRCGYC | 1 cut(s) | 1251 |
| BsaJI | CCNNGG | 5 cut(s) | 111, 198, 517, 1254, 1283 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 421, 451, 1207, 1237, 1264, 1294 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1088, 1089, 1159, 1212 |
| Bse118I | RCCGGY | 1 cut(s) | 620 |
| Bse1I | ACTGG | 1 cut(s) | 269 |
| Bse3DI | GCAATG | 1 cut(s) | 727 |
| BseBI | CCWGG | 4 cut(s) | 113, 173, 519, 1160 |
| BseDI | CCNNGG | 5 cut(s) | 111, 198, 517, 1254, 1283 |
| BseGI | GGATG | 2 cut(s) | 121, 1011 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1088, 1089, 1159, 1212 |
| BseMI | GCAATG | 1 cut(s) | 727 |
| BseMII | CTCAG | 4 cut(s) | 173, 287, 385, 987 |
| BseNI | ACTGG | 1 cut(s) | 269 |
| BseRI | GAGGAG | 3 cut(s) | 110, 429, 728 |
| BseSI | GKGCMC | 3 cut(s) | 1142, 1306, 1315 |
| BseXI | GCAGC | 9 cut(s) | 316, 322, 332, 351, 369, 400, 403, 416, 438 |
| BseYI | CCCAGC | 2 cut(s) | 432, 650 |
| BsgI | GTGCAG | 3 cut(s) | 377, 406, 444 |
| Bsh1236I | CGCG | 1 cut(s) | 48 |
| BshFI | GGCC | 6 cut(s) | 197, 267, 306, 624, 1039, 1140 |
| BshNI | GGYRCC | 3 cut(s) | 694, 1250, 1271 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1306, 1315 |
| BsiSI | CCGG | 1 cut(s) | 621 |
| BslFI | GGGAC | 2 cut(s) | 1134, 1143 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1088, 1089, 1159, 1212 |
| BsmAI | GTCTC | 1 cut(s) | 292 |
| BsmFI | GGGAC | 2 cut(s) | 1134, 1143 |
| BsnI | GGCC | 6 cut(s) | 197, 267, 306, 624, 1039, 1140 |
| Bsp119I | TTCGAA | 1 cut(s) | 18 |
| Bsp120I | GGGCCC | 1 cut(s) | 1138 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1142, 1306, 1315 |
| Bsp1407I | TGTACA | 1 cut(s) | 118 |
| Bsp143I | GATC | 3 cut(s) | 103, 637, 954 |
| Bsp19I | CCATGG | 1 cut(s) | 1254 |
| BspANI | GGCC | 6 cut(s) | 197, 267, 306, 624, 1039, 1140 |
| BspCNI | CTCAG | 4 cut(s) | 174, 288, 384, 988 |
| BspFNI | CGCG | 1 cut(s) | 48 |
| BspHI | TCATGA | 1 cut(s) | 1060 |
| BspLI | GGNNCC | 4 cut(s) | 696, 1140, 1252, 1273 |
| BspMAI | CTGCAG | 3 cut(s) | 322, 341, 359 |
| BspMI | ACCTGC | 5 cut(s) | 466, 500, 518, 575, 612 |
| BspPI | GGATC | 2 cut(s) | 632, 962 |
| BspQI | GCTCTTC | 2 cut(s) | 702, 822 |
| BspT104I | TTCGAA | 1 cut(s) | 18 |
| BspT107I | GGYRCC | 3 cut(s) | 694, 1250, 1271 |
| BsrDI | GCAATG | 1 cut(s) | 727 |
| BsrFI | RCCGGY | 1 cut(s) | 620 |
| BsrGI | TGTACA | 1 cut(s) | 118 |
| BsrI | ACTGG | 1 cut(s) | 269 |
| BssAI | RCCGGY | 1 cut(s) | 620 |
| BssECI | CCNNGG | 5 cut(s) | 111, 198, 517, 1254, 1283 |
| BssMI | GATC | 3 cut(s) | 103, 637, 954 |
| BssNAI | GTATAC | 1 cut(s) | 824 |
| BssNI | GRCGYC | 1 cut(s) | 1251 |
| BssSI | CACGAG | 1 cut(s) | 958 |
| BssT1I | CCWWGG | 3 cut(s) | 198, 1254, 1283 |
| Bst1107I | GTATAC | 1 cut(s) | 824 |
| Bst2BI | CACGAG | 1 cut(s) | 958 |
| Bst2UI | CCWGG | 4 cut(s) | 113, 173, 519, 1160 |
| Bst4CI | ACNGT | 4 cut(s) | 30, 828, 932, 1172 |
| Bst6I | CTCTTC | 2 cut(s) | 702, 822 |
| BstACI | GRCGYC | 1 cut(s) | 1251 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 326, 363, 410, 1310 |
| BstAUI | TGTACA | 1 cut(s) | 118 |
| BstBAI | YACGTR | 2 cut(s) | 1193, 1211 |
| BstBI | TTCGAA | 1 cut(s) | 18 |
| BstC8I | GCNNGC | 8 cut(s) | 308, 421, 473, 609, 622, 626, 656, 1295 |
| BstDEI | CTNAG | 7 cut(s) | 90, 182, 296, 371, 996, 1050, 1110 |
| BstDSI | CCRYGG | 1 cut(s) | 1254 |
| BstF5I | GGATG | 2 cut(s) | 121, 1011 |
| BstFNI | CGCG | 1 cut(s) | 48 |
| BstH2I | RGCGCY | 1 cut(s) | 1254 |
| BstHHI | GCGC | 3 cut(s) | 774, 1095, 1253 |
| BstKTI | GATC | 3 cut(s) | 106, 640, 957 |
| BstMAI | GTCTC | 1 cut(s) | 292 |
| BstMBI | GATC | 3 cut(s) | 103, 637, 954 |
| BstNI | CCWGG | 4 cut(s) | 113, 173, 519, 1160 |
| BstSCI | CCNGG | 4 cut(s) | 111, 171, 517, 1158 |
| BstSFI | CTRYAG | 5 cut(s) | 318, 337, 355, 575, 990 |
| BstSLI | GKGCMC | 3 cut(s) | 1142, 1306, 1315 |
| BstUI | CGCG | 1 cut(s) | 48 |
| BstV1I | GCAGC | 9 cut(s) | 316, 322, 332, 351, 369, 400, 403, 416, 438 |
| BstZ17I | GTATAC | 1 cut(s) | 824 |
| BsuI | GTATCC | 2 cut(s) | 1180, 1241 |
| BsuRI | GGCC | 6 cut(s) | 197, 267, 306, 624, 1039, 1140 |
| BtgI | CCRYGG | 1 cut(s) | 1254 |
| BtsCI | GGATG | 2 cut(s) | 121, 1011 |
| BtsI | GCAGTG | 3 cut(s) | 131, 228, 315 |
| BtsIMutI | CAGTG | 3 cut(s) | 131, 228, 315 |
| BveI | ACCTGC | 5 cut(s) | 466, 500, 518, 575, 612 |
| Cac8I | GCNNGC | 8 cut(s) | 308, 421, 473, 609, 622, 626, 656, 1295 |
| CaiI | CAGNNNCTG | 3 cut(s) | 326, 363, 451 |
| CciI | TCATGA | 1 cut(s) | 1060 |
| CfoI | GCGC | 3 cut(s) | 774, 1095, 1253 |
| Cfr10I | RCCGGY | 1 cut(s) | 620 |
| Cfr13I | GGNCC | 4 cut(s) | 266, 1038, 1138, 1139 |
| Csp6I | GTAC | 5 cut(s) | 119, 221, 695, 933, 1105 |
| CviAII | CATG | 5 cut(s) | 167, 1004, 1061, 1124, 1255 |
| CviQI | GTAC | 5 cut(s) | 119, 221, 695, 933, 1105 |
| DdeI | CTNAG | 7 cut(s) | 90, 182, 296, 371, 996, 1050, 1110 |
| DinI | GGCGCC | 1 cut(s) | 1252 |
| DpnI | GATC | 3 cut(s) | 105, 639, 956 |
| DpnII | GATC | 3 cut(s) | 103, 637, 954 |
| DraIII | CACNNNGTG | 2 cut(s) | 1196, 1310 |
| EaeI | YGGCCR | 2 cut(s) | 304, 622 |
| Eam1104I | CTCTTC | 2 cut(s) | 702, 822 |
| EarI | CTCTTC | 2 cut(s) | 702, 822 |
| EciI | GGCGGA | 1 cut(s) | 607 |
| Eco130I | CCWWGG | 3 cut(s) | 198, 1254, 1283 |
| Eco24I | GRGCYC | 1 cut(s) | 1142 |
| Eco57I | CTGAAG | 3 cut(s) | 257, 273, 957 |
| Eco72I | CACGTG | 1 cut(s) | 1193 |
| EcoRII | CCWGG | 4 cut(s) | 111, 171, 517, 1158 |
| EcoT14I | CCWWGG | 3 cut(s) | 198, 1254, 1283 |
| EcoT38I | GRGCYC | 1 cut(s) | 1142 |
| EgeI | GGCGCC | 1 cut(s) | 1252 |
| EheI | GGCGCC | 1 cut(s) | 1252 |
| ErhI | CCWWGG | 3 cut(s) | 198, 1254, 1283 |
| FaeI | CATG | 5 cut(s) | 170, 1007, 1064, 1127, 1258 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 140, 172 |
| FaqI | GGGAC | 2 cut(s) | 1134, 1143 |
| FatI | CATG | 5 cut(s) | 166, 1003, 1060, 1123, 1254 |
| FauI | CCCGC | 2 cut(s) | 387, 1302 |
| FblI | GTMKAC | 2 cut(s) | 823, 847 |
| FokI | GGATG | 2 cut(s) | 128, 998 |
| FriOI | GRGCYC | 1 cut(s) | 1142 |
| FspBI | CTAG | 4 cut(s) | 213, 704, 1236, 1284 |
| GlaI | GCGC | 3 cut(s) | 773, 1094, 1252 |
| GsaI | CCCAGC | 2 cut(s) | 436, 654 |
| HaeII | RGCGCY | 1 cut(s) | 1254 |
| HaeIII | GGCC | 6 cut(s) | 197, 267, 306, 624, 1039, 1140 |
| HapII | CCGG | 1 cut(s) | 621 |
| HhaI | GCGC | 3 cut(s) | 774, 1095, 1253 |
| Hin1I | GRCGYC | 1 cut(s) | 1251 |
| Hin1II | CATG | 5 cut(s) | 170, 1007, 1064, 1127, 1258 |
| Hin6I | GCGC | 3 cut(s) | 772, 1093, 1251 |
| HinP1I | GCGC | 3 cut(s) | 772, 1093, 1251 |
| HinfI | GANTC | 5 cut(s) | 15, 143, 300, 590, 731 |
| HpaII | CCGG | 1 cut(s) | 621 |
| HphI | GGTGA | 2 cut(s) | 203, 434 |
| Hpy166II | GTNNAC | 6 cut(s) | 26, 348, 824, 848, 1304, 1313 |
| Hpy188I | TCNGA | 4 cut(s) | 138, 183, 237, 292 |
| Hpy188III | TCNNGA | 3 cut(s) | 670, 958, 1061 |
| Hpy8I | GTNNAC | 6 cut(s) | 26, 348, 824, 848, 1304, 1313 |
| HpyAV | CCTTC | 8 cut(s) | 5, 45, 232, 297, 476, 639, 745, 1157 |
| HpyCH4III | ACNGT | 4 cut(s) | 30, 828, 932, 1172 |
| HpyCH4IV | ACGT | 5 cut(s) | 1132, 1192, 1210, 1300, 1306 |
| HpyF3I | CTNAG | 7 cut(s) | 90, 182, 296, 371, 996, 1050, 1110 |
| HpySE526I | ACGT | 5 cut(s) | 1132, 1192, 1210, 1300, 1306 |
| Hsp92I | GRCGYC | 1 cut(s) | 1251 |
| Hsp92II | CATG | 5 cut(s) | 170, 1007, 1064, 1127, 1258 |
| HspAI | GCGC | 3 cut(s) | 772, 1093, 1251 |
| KasI | GGCGCC | 1 cut(s) | 1250 |
| KpnI | GGTACC | 1 cut(s) | 698 |
| KroI | GCCGGC | 1 cut(s) | 620 |
| KroNI | GCCGGC | 1 cut(s) | 622 |
| Kzo9I | GATC | 3 cut(s) | 103, 637, 954 |
| LguI | GCTCTTC | 2 cut(s) | 702, 822 |
| LmnI | GCTCC | 1 cut(s) | 1099 |
| Lsp1109I | GCAGC | 9 cut(s) | 316, 322, 332, 351, 369, 400, 403, 416, 438 |
| LweI | GCATC | 1 cut(s) | 273 |
| MaeI | CTAG | 4 cut(s) | 213, 704, 1236, 1284 |
| MaeII | ACGT | 5 cut(s) | 1132, 1192, 1210, 1300, 1306 |
| MalI | GATC | 3 cut(s) | 105, 639, 956 |
| MboI | GATC | 3 cut(s) | 103, 637, 954 |
| MboII | GAAGA | 3 cut(s) | 17, 719, 809 |
| MhlI | GDGCHC | 3 cut(s) | 1142, 1306, 1315 |
| MluCI | AATT | 5 cut(s) | 805, 873, 1024, 1030, 1069 |
| Mly113I | GGCGCC | 1 cut(s) | 1251 |
| MlyI | GAGTC | 3 cut(s) | 137, 294, 599 |
| MroNI | GCCGGC | 1 cut(s) | 620 |
| MroXI | GAANNNNTTC | 1 cut(s) | 816 |
| MseI | TTAA | 1 cut(s) | 1318 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1016 |
| MspA1I | CMGCKG | 1 cut(s) | 451 |
| MspI | CCGG | 1 cut(s) | 621 |
| MspR9I | CCNGG | 4 cut(s) | 113, 173, 519, 1160 |
| MvaI | CCWGG | 4 cut(s) | 113, 173, 519, 1160 |
| MvnI | CGCG | 1 cut(s) | 48 |
| NaeI | GCCGGC | 1 cut(s) | 622 |
| NarI | GGCGCC | 1 cut(s) | 1251 |
| NcoI | CCATGG | 1 cut(s) | 1254 |
| NdeII | GATC | 3 cut(s) | 103, 637, 954 |
| NgoMIV | GCCGGC | 1 cut(s) | 620 |
| NlaIII | CATG | 5 cut(s) | 170, 1007, 1064, 1127, 1258 |
| NlaIV | GGNNCC | 4 cut(s) | 696, 1140, 1252, 1273 |
| NmeAIII | GCCGAG | 1 cut(s) | 282 |
| NspV | TTCGAA | 1 cut(s) | 18 |
| PagI | TCATGA | 1 cut(s) | 1060 |
| PaqCI | CACCTGC | 2 cut(s) | 500, 612 |
| PciSI | GCTCTTC | 2 cut(s) | 702, 822 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1297 |
| PdiI | GCCGGC | 1 cut(s) | 622 |
| PdmI | GAANNNNTTC | 1 cut(s) | 816 |
| PfeI | GAWTC | 2 cut(s) | 15, 731 |
| PleI | GAGTC | 3 cut(s) | 137, 294, 598 |
| PluTI | GGCGCC | 1 cut(s) | 1254 |
| PmaCI | CACGTG | 1 cut(s) | 1193 |
| PmlI | CACGTG | 1 cut(s) | 1193 |
| PpsI | GAGTC | 3 cut(s) | 137, 294, 598 |
| Ppu21I | YACGTR | 2 cut(s) | 1193, 1211 |
| PsiI | TTATAA | 3 cut(s) | 161, 1029, 1074 |
| Psp6I | CCWGG | 4 cut(s) | 111, 171, 517, 1158 |
| PspCI | CACGTG | 1 cut(s) | 1193 |
| PspFI | CCCAGC | 2 cut(s) | 432, 650 |
| PspGI | CCWGG | 4 cut(s) | 111, 171, 517, 1158 |
| PspN4I | GGNNCC | 4 cut(s) | 696, 1140, 1252, 1273 |
| PspOMI | GGGCCC | 1 cut(s) | 1138 |
| PspPI | GGNCC | 4 cut(s) | 266, 1038, 1138, 1139 |
| PstI | CTGCAG | 3 cut(s) | 322, 341, 359 |
| PstNI | CAGNNNCTG | 3 cut(s) | 326, 363, 451 |
| RsaI | GTAC | 5 cut(s) | 120, 222, 696, 934, 1106 |
| RsaNI | GTAC | 5 cut(s) | 119, 221, 695, 933, 1105 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1016 |
| SapI | GCTCTTC | 2 cut(s) | 702, 822 |
| SaqAI | TTAA | 1 cut(s) | 1318 |
| Sau3AI | GATC | 3 cut(s) | 103, 637, 954 |
| Sau96I | GGNCC | 4 cut(s) | 266, 1038, 1138, 1139 |
| SchI | GAGTC | 3 cut(s) | 137, 294, 599 |
| ScrFI | CCNGG | 4 cut(s) | 113, 173, 519, 1160 |
| SduI | GDGCHC | 3 cut(s) | 1142, 1306, 1315 |
| SfaNI | GCATC | 1 cut(s) | 273 |
| SfcI | CTRYAG | 5 cut(s) | 318, 337, 355, 575, 990 |
| SfoI | GGCGCC | 1 cut(s) | 1252 |
| SfuI | TTCGAA | 1 cut(s) | 18 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1016 |
| SmlI | CTYRAG | 1 cut(s) | 668 |
| SmoI | CTYRAG | 1 cut(s) | 668 |
| Sse9I | AATT | 5 cut(s) | 805, 873, 1024, 1030, 1069 |
| SspDI | GGCGCC | 1 cut(s) | 1250 |
| SspMI | CTAG | 4 cut(s) | 213, 704, 1236, 1284 |
| StyD4I | CCNGG | 4 cut(s) | 111, 171, 517, 1158 |
| StyI | CCWWGG | 3 cut(s) | 198, 1254, 1283 |
| TaaI | ACNGT | 4 cut(s) | 30, 828, 932, 1172 |
| TaiI | ACGT | 5 cut(s) | 1135, 1195, 1213, 1303, 1309 |
| TaqI | TCGA | 2 cut(s) | 18, 208 |
| TasI | AATT | 5 cut(s) | 805, 873, 1024, 1030, 1069 |
| TatI | WGTACW | 1 cut(s) | 118 |
| TauI | GCSGC | 2 cut(s) | 451, 703 |
| TfiI | GAWTC | 2 cut(s) | 15, 731 |
| Tru1I | TTAA | 1 cut(s) | 1318 |
| Tru9I | TTAA | 1 cut(s) | 1318 |
| TscAI | CASTG | 3 cut(s) | 131, 235, 322 |
| TseI | GCWGC | 9 cut(s) | 310, 320, 329, 339, 357, 404, 413, 416, 451 |
| TspDTI | ATGAA | 4 cut(s) | 24, 272, 956, 1049 |
| TspGWI | ACGGA | 1 cut(s) | 967 |
| TspRI | CASTG | 3 cut(s) | 131, 235, 322 |
| VneI | GTGCAC | 2 cut(s) | 1302, 1311 |
| XmaJI | CCTAGG | 1 cut(s) | 1283 |
| XmiI | GTMKAC | 2 cut(s) | 823, 847 |
| XmnI | GAANNNNTTC | 1 cut(s) | 816 |
| XspI | CTAG | 4 cut(s) | 213, 704, 1236, 1284 |