toxin transport
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 21 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1046 |
| AatII | GACGTC | 1 cut(s) | 869 |
| AccB1I | GGYRCC | 2 cut(s) | 146, 332 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1034 |
| AccII | CGCG | 2 cut(s) | 1089, 1355 |
| AciI | CCGC | 6 cut(s) | 302, 539, 567, 964, 1477, 1605 |
| AclWI | GGATC | 3 cut(s) | 1213, 1225, 1226 |
| AcoI | YGGCCR | 5 cut(s) | 626, 646, 796, 980, 991 |
| AcsI | RAATTY | 4 cut(s) | 208, 507, 1079, 1544 |
| AcuI | CTGAAG | 1 cut(s) | 860 |
| AcyI | GRCGYC | 3 cut(s) | 147, 333, 866 |
| AfaI | GTAC | 5 cut(s) | 183, 434, 1258, 1370, 1500 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 143, 624, 651, 676, 753, 989, 1034, 1180, 1378 |
| AflII | CTTAAG | 1 cut(s) | 1205 |
| AgeI | ACCGGT | 1 cut(s) | 604 |
| AgsI | TTSAA | 7 cut(s) | 350, 513, 548, 683, 1283, 1492, 1677 |
| AjiI | CACGTC | 1 cut(s) | 893 |
| AjnI | CCWGG | 2 cut(s) | 590, 912 |
| Alw21I | GWGCWC | 1 cut(s) | 423 |
| Alw26I | GTCTC | 2 cut(s) | 310, 1148 |
| AlwI | GGATC | 3 cut(s) | 1213, 1225, 1226 |
| Ama87I | CYCGRG | 3 cut(s) | 393, 422, 1409 |
| ApoI | RAATTY | 4 cut(s) | 208, 507, 1079, 1544 |
| AsiGI | ACCGGT | 1 cut(s) | 604 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1521 |
| AspLEI | GCGC | 6 cut(s) | 56, 149, 335, 1166, 1197, 1357 |
| AspS9I | GGNCC | 9 cut(s) | 190, 382, 541, 610, 809, 828, 1183, 1659, 1691 |
| AsuC2I | CCSGG | 6 cut(s) | 202, 330, 394, 395, 677, 748 |
| AsuHPI | GGTGA | 3 cut(s) | 260, 686, 778 |
| AvaI | CYCGRG | 3 cut(s) | 393, 422, 1409 |
| AvaII | GGWCC | 4 cut(s) | 190, 382, 541, 1183 |
| AxyI | CCTNAGG | 1 cut(s) | 824 |
| BamHI | GGATCC | 1 cut(s) | 1218 |
| BanI | GGYRCC | 2 cut(s) | 146, 332 |
| BanII | GRGCYC | 1 cut(s) | 423 |
| BbsI | GAAGAC | 3 cut(s) | 711, 1389, 1592 |
| Bbv12I | GWGCWC | 1 cut(s) | 423 |
| BbvCI | CCTCAGC | 1 cut(s) | 562 |
| BciT130I | CCWGG | 2 cut(s) | 592, 914 |
| BciVI | GTATCC | 1 cut(s) | 1163 |
| BcnI | CCSGG | 6 cut(s) | 202, 330, 394, 395, 677, 748 |
| BcoDI | GTCTC | 2 cut(s) | 310, 1148 |
| BfaI | CTAG | 3 cut(s) | 416, 780, 1151 |
| BfmI | CTRYAG | 4 cut(s) | 704, 724, 1054, 1072 |
| BfoI | RGCGCY | 4 cut(s) | 57, 150, 336, 1167 |
| BfrI | CTTAAG | 1 cut(s) | 1205 |
| BfuI | GTATCC | 1 cut(s) | 1163 |
| BglII | AGATCT | 1 cut(s) | 580 |
| BlpI | GCTNAGC | 1 cut(s) | 57 |
| Bme1390I | CCNGG | 8 cut(s) | 202, 330, 394, 395, 592, 677, 748, 914 |
| Bme18I | GGWCC | 4 cut(s) | 190, 382, 541, 1183 |
| BmeT110I | CYCGRG | 3 cut(s) | 393, 422, 1409 |
| BmgBI | CACGTC | 1 cut(s) | 893 |
| BmgT120I | GGNCC | 9 cut(s) | 190, 382, 541, 610, 809, 828, 1183, 1659, 1691 |
| BmiI | GGNNCC | 9 cut(s) | 148, 192, 334, 384, 612, 752, 773, 1184, 1220 |
| BmrFI | CCNGG | 8 cut(s) | 202, 330, 394, 395, 592, 677, 748, 914 |
| BmsI | GCATC | 4 cut(s) | 121, 886, 930, 1210 |
| BpiI | GAAGAC | 3 cut(s) | 711, 1389, 1592 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1129, 1161 |
| BpmI | CTGGAG | 3 cut(s) | 574, 884, 1048 |
| Bpu10I | CCTNAGC | 1 cut(s) | 562 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 57 |
| BpuEI | CTTGAG | 3 cut(s) | 149, 170, 362 |
| BpuMI | CCSGG | 6 cut(s) | 202, 330, 394, 395, 677, 748 |
| BsaHI | GRCGYC | 3 cut(s) | 147, 333, 866 |
| BsaI | GGTCTC | 1 cut(s) | 310 |
| BsaJI | CCNNGG | 2 cut(s) | 96, 393 |
| BsaWI | WCCGGW | 5 cut(s) | 604, 651, 753, 942, 1045 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 882, 912, 1046, 1076 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 143, 624, 651, 676, 753, 989, 1034, 1180, 1378 |
| Bse118I | RCCGGY | 8 cut(s) | 143, 604, 624, 628, 644, 794, 952, 966 |
| Bse1I | ACTGG | 2 cut(s) | 274, 901 |
| Bse21I | CCTNAGG | 1 cut(s) | 824 |
| BseBI | CCWGG | 2 cut(s) | 592, 914 |
| BseDI | CCNNGG | 2 cut(s) | 96, 393 |
| BseGI | GGATG | 6 cut(s) | 112, 362, 614, 869, 880, 886 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 143, 624, 651, 676, 753, 989, 1034, 1180, 1378 |
| BseMII | CTCAG | 3 cut(s) | 434, 576, 815 |
| BseNI | ACTGG | 2 cut(s) | 274, 901 |
| BseRI | GAGGAG | 1 cut(s) | 1251 |
| BseX3I | CGGCCG | 2 cut(s) | 626, 980 |
| BseYI | CCCAGC | 1 cut(s) | 1656 |
| Bsh1236I | CGCG | 2 cut(s) | 1089, 1355 |
| Bsh1285I | CGRYCG | 2 cut(s) | 629, 983 |
| BshNI | GGYRCC | 2 cut(s) | 146, 332 |
| BshTI | ACCGGT | 1 cut(s) | 604 |
| BsiEI | CGRYCG | 2 cut(s) | 629, 983 |
| BsiHKAI | GWGCWC | 1 cut(s) | 423 |
| BsiHKCI | CYCGRG | 3 cut(s) | 393, 422, 1409 |
| BslFI | GGGAC | 1 cut(s) | 1586 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 143, 624, 651, 676, 753, 989, 1034, 1180, 1378 |
| BsmAI | GTCTC | 2 cut(s) | 310, 1148 |
| BsmFI | GGGAC | 1 cut(s) | 1586 |
| Bso31I | GGTCTC | 1 cut(s) | 310 |
| BsoBI | CYCGRG | 3 cut(s) | 393, 422, 1409 |
| Bsp1286I | GDGCHC | 1 cut(s) | 423 |
| Bsp143I | GATC | 5 cut(s) | 13, 580, 1218, 1230, 1578 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 57 |
| BspACI | CCGC | 6 cut(s) | 302, 539, 567, 964, 1477, 1605 |
| BspCNI | CTCAG | 3 cut(s) | 435, 575, 816 |
| BspFNI | CGCG | 2 cut(s) | 1089, 1355 |
| BspHI | TCATGA | 1 cut(s) | 1332 |
| BspLI | GGNNCC | 9 cut(s) | 148, 192, 334, 384, 612, 752, 773, 1184, 1220 |
| BspMAI | CTGCAG | 2 cut(s) | 708, 728 |
| BspPI | GGATC | 3 cut(s) | 1213, 1225, 1226 |
| BspT107I | GGYRCC | 2 cut(s) | 146, 332 |
| BspTI | CTTAAG | 1 cut(s) | 1205 |
| BspTNI | GGTCTC | 1 cut(s) | 310 |
| BsrFI | RCCGGY | 8 cut(s) | 143, 604, 624, 628, 644, 794, 952, 966 |
| BsrI | ACTGG | 2 cut(s) | 274, 901 |
| BssAI | RCCGGY | 8 cut(s) | 143, 604, 624, 628, 644, 794, 952, 966 |
| BssECI | CCNNGG | 2 cut(s) | 96, 393 |
| BssMI | GATC | 5 cut(s) | 13, 580, 1218, 1230, 1578 |
| BssNI | GRCGYC | 3 cut(s) | 147, 333, 866 |
| BssT1I | CCWWGG | 1 cut(s) | 96 |
| Bst2UI | CCWGG | 2 cut(s) | 592, 914 |
| Bst4CI | ACNGT | 4 cut(s) | 529, 1058, 1076, 1600 |
| Bst6I | CTCTTC | 1 cut(s) | 1112 |
| BstACI | GRCGYC | 3 cut(s) | 147, 333, 866 |
| BstAFI | CTTAAG | 1 cut(s) | 1205 |
| BstC8I | GCNNGC | 5 cut(s) | 145, 630, 910, 968, 1199 |
| BstDEI | CTNAG | 7 cut(s) | 57, 356, 443, 562, 824, 1453, 1616 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1376 |
| BstF5I | GGATG | 6 cut(s) | 112, 362, 614, 869, 880, 886 |
| BstFNI | CGCG | 2 cut(s) | 1089, 1355 |
| BstH2I | RGCGCY | 4 cut(s) | 57, 150, 336, 1167 |
| BstHHI | GCGC | 6 cut(s) | 56, 149, 335, 1166, 1197, 1357 |
| BstKTI | GATC | 5 cut(s) | 16, 583, 1221, 1233, 1581 |
| BstMAI | GTCTC | 2 cut(s) | 310, 1148 |
| BstMBI | GATC | 5 cut(s) | 13, 580, 1218, 1230, 1578 |
| BstMCI | CGRYCG | 2 cut(s) | 629, 983 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 51, 67, 816, 918, 935, 1283, 1292, 1313 |
| BstNI | CCWGG | 2 cut(s) | 592, 914 |
| BstSCI | CCNGG | 8 cut(s) | 200, 328, 392, 393, 590, 675, 746, 912 |
| BstSFI | CTRYAG | 4 cut(s) | 704, 724, 1054, 1072 |
| BstUI | CGCG | 2 cut(s) | 1089, 1355 |
| BstV2I | GAAGAC | 3 cut(s) | 711, 1389, 1592 |
| BstX2I | RGATCY | 2 cut(s) | 580, 1218 |
| BstYI | RGATCY | 2 cut(s) | 580, 1218 |
| BstZI | CGGCCG | 2 cut(s) | 626, 980 |
| Bsu36I | CCTNAGG | 1 cut(s) | 824 |
| BsuI | GTATCC | 1 cut(s) | 1163 |
| BtgZI | GCGATG | 1 cut(s) | 60 |
| BtrI | CACGTC | 1 cut(s) | 893 |
| BtsCI | GGATG | 6 cut(s) | 112, 362, 614, 869, 880, 886 |
| BtsIMutI | CAGTG | 1 cut(s) | 1563 |
| Cac8I | GCNNGC | 5 cut(s) | 145, 630, 910, 968, 1199 |
| CciI | TCATGA | 1 cut(s) | 1332 |
| CfoI | GCGC | 6 cut(s) | 56, 149, 335, 1166, 1197, 1357 |
| Cfr10I | RCCGGY | 8 cut(s) | 143, 604, 624, 628, 644, 794, 952, 966 |
| Cfr13I | GGNCC | 9 cut(s) | 190, 382, 541, 610, 809, 828, 1183, 1659, 1691 |
| Cfr9I | CCCGGG | 1 cut(s) | 393 |
| CseI | GACGC | 2 cut(s) | 416, 1361 |
| Csp6I | GTAC | 5 cut(s) | 182, 433, 1257, 1369, 1499 |
| CspAI | ACCGGT | 1 cut(s) | 604 |
| CviAII | CATG | 4 cut(s) | 279, 1333, 1345, 1683 |
| CviQI | GTAC | 5 cut(s) | 182, 433, 1257, 1369, 1499 |
| DdeI | CTNAG | 7 cut(s) | 57, 356, 443, 562, 824, 1453, 1616 |
| DinI | GGCGCC | 2 cut(s) | 148, 334 |
| DpnI | GATC | 5 cut(s) | 15, 582, 1220, 1232, 1580 |
| DpnII | GATC | 5 cut(s) | 13, 580, 1218, 1230, 1578 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1046 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1046 |
| EaeI | YGGCCR | 5 cut(s) | 626, 646, 796, 980, 991 |
| EagI | CGGCCG | 2 cut(s) | 626, 980 |
| Eam1104I | CTCTTC | 1 cut(s) | 1112 |
| EarI | CTCTTC | 1 cut(s) | 1112 |
| Ecl136II | GAGCTC | 1 cut(s) | 421 |
| EclXI | CGGCCG | 2 cut(s) | 626, 980 |
| Eco130I | CCWWGG | 1 cut(s) | 96 |
| Eco24I | GRGCYC | 1 cut(s) | 423 |
| Eco31I | GGTCTC | 1 cut(s) | 310 |
| Eco47I | GGWCC | 4 cut(s) | 190, 382, 541, 1183 |
| Eco52I | CGGCCG | 2 cut(s) | 626, 980 |
| Eco53kI | GAGCTC | 1 cut(s) | 421 |
| Eco57I | CTGAAG | 1 cut(s) | 860 |
| Eco81I | CCTNAGG | 1 cut(s) | 824 |
| Eco88I | CYCGRG | 3 cut(s) | 393, 422, 1409 |
| EcoICRI | GAGCTC | 1 cut(s) | 421 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1376 |
| EcoO109I | RGGNCCY | 2 cut(s) | 190, 382 |
| EcoRI | GAATTC | 1 cut(s) | 1544 |
| EcoRII | CCWGG | 2 cut(s) | 590, 912 |
| EcoT14I | CCWWGG | 1 cut(s) | 96 |
| EcoT38I | GRGCYC | 1 cut(s) | 423 |
| EgeI | GGCGCC | 2 cut(s) | 148, 334 |
| EheI | GGCGCC | 2 cut(s) | 148, 334 |
| ErhI | CCWWGG | 1 cut(s) | 96 |
| FaeI | CATG | 4 cut(s) | 282, 1336, 1348, 1686 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1124, 1156 |
| FaqI | GGGAC | 1 cut(s) | 1586 |
| FatI | CATG | 4 cut(s) | 278, 1332, 1344, 1682 |
| FauI | CCCGC | 1 cut(s) | 1612 |
| FokI | GGATG | 6 cut(s) | 99, 349, 601, 856, 867, 873 |
| FriOI | GRGCYC | 1 cut(s) | 423 |
| FspBI | CTAG | 3 cut(s) | 416, 780, 1151 |
| GlaI | GCGC | 6 cut(s) | 55, 148, 334, 1165, 1196, 1356 |
| GsaI | CCCAGC | 1 cut(s) | 1660 |
| GsuI | CTGGAG | 3 cut(s) | 574, 884, 1048 |
| HaeII | RGCGCY | 4 cut(s) | 57, 150, 336, 1167 |
| HgaI | GACGC | 2 cut(s) | 416, 1361 |
| HhaI | GCGC | 6 cut(s) | 56, 149, 335, 1166, 1197, 1357 |
| Hin1I | GRCGYC | 3 cut(s) | 147, 333, 866 |
| Hin1II | CATG | 4 cut(s) | 282, 1336, 1348, 1686 |
| Hin6I | GCGC | 6 cut(s) | 54, 147, 333, 1164, 1195, 1355 |
| HinP1I | GCGC | 6 cut(s) | 54, 147, 333, 1164, 1195, 1355 |
| HincII | GTYRAC | 2 cut(s) | 948, 958 |
| HindII | GTYRAC | 2 cut(s) | 948, 958 |
| HindIII | AAGCTT | 1 cut(s) | 59 |
| HinfI | GANTC | 9 cut(s) | 170, 197, 373, 445, 463, 595, 783, 1436, 1588 |
| HphI | GGTGA | 3 cut(s) | 260, 686, 778 |
| Hpy166II | GTNNAC | 3 cut(s) | 948, 958, 1553 |
| Hpy188I | TCNGA | 5 cut(s) | 600, 771, 1002, 1102, 1516 |
| Hpy188III | TCNNGA | 9 cut(s) | 29, 116, 416, 424, 1222, 1247, 1333, 1448, 1582 |
| Hpy8I | GTNNAC | 3 cut(s) | 948, 958, 1553 |
| Hpy99I | CGWCG | 2 cut(s) | 410, 1094 |
| HpyAV | CCTTC | 4 cut(s) | 44, 421, 554, 698 |
| HpyCH4III | ACNGT | 4 cut(s) | 529, 1058, 1076, 1600 |
| HpyCH4IV | ACGT | 5 cut(s) | 866, 892, 932, 1251, 1428 |
| HpyCH4V | TGCA | 7 cut(s) | 112, 536, 706, 726, 877, 929, 1016 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 51, 67, 816, 918, 935, 1283, 1292, 1313 |
| HpyF3I | CTNAG | 7 cut(s) | 57, 356, 443, 562, 824, 1453, 1616 |
| HpySE526I | ACGT | 5 cut(s) | 866, 892, 932, 1251, 1428 |
| Hsp92I | GRCGYC | 3 cut(s) | 147, 333, 866 |
| Hsp92II | CATG | 4 cut(s) | 282, 1336, 1348, 1686 |
| HspAI | GCGC | 6 cut(s) | 54, 147, 333, 1164, 1195, 1355 |
| KasI | GGCGCC | 2 cut(s) | 146, 332 |
| KroI | GCCGGC | 3 cut(s) | 143, 628, 966 |
| KroNI | GCCGGC | 3 cut(s) | 145, 630, 968 |
| Kzo9I | GATC | 5 cut(s) | 13, 580, 1218, 1230, 1578 |
| LmnI | GCTCC | 4 cut(s) | 4, 903, 1150, 1362 |
| LweI | GCATC | 4 cut(s) | 121, 886, 930, 1210 |
| MaeI | CTAG | 3 cut(s) | 416, 780, 1151 |
| MaeII | ACGT | 5 cut(s) | 866, 892, 932, 1251, 1428 |
| MaeIII | GTNAC | 4 cut(s) | 451, 1058, 1121, 1643 |
| MalI | GATC | 5 cut(s) | 15, 582, 1220, 1232, 1580 |
| MboI | GATC | 5 cut(s) | 13, 580, 1218, 1230, 1578 |
| MboII | GAAGA | 6 cut(s) | 590, 667, 711, 1129, 1394, 1597 |
| MflI | RGATCY | 2 cut(s) | 580, 1218 |
| MhlI | GDGCHC | 1 cut(s) | 423 |
| MluCI | AATT | 7 cut(s) | 208, 507, 1079, 1510, 1544, 1608, 1695 |
| Mly113I | GGCGCC | 2 cut(s) | 147, 333 |
| MlyI | GAGTC | 4 cut(s) | 179, 454, 604, 1582 |
| MmeI | TCCRAC | 2 cut(s) | 181, 1125 |
| MreI | CGCCGGCG | 1 cut(s) | 143 |
| MroNI | GCCGGC | 3 cut(s) | 143, 628, 966 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1521 |
| MseI | TTAA | 2 cut(s) | 1112, 1206 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1331, 1347 |
| MspA1I | CMGCKG | 1 cut(s) | 539 |
| MspCI | CTTAAG | 1 cut(s) | 1205 |
| MspR9I | CCNGG | 8 cut(s) | 202, 330, 394, 395, 592, 677, 748, 914 |
| MvaI | CCWGG | 2 cut(s) | 592, 914 |
| MvnI | CGCG | 2 cut(s) | 1089, 1355 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 51, 67, 816, 918, 935, 1283, 1292, 1313 |
| NaeI | GCCGGC | 3 cut(s) | 145, 630, 968 |
| NarI | GGCGCC | 2 cut(s) | 147, 333 |
| NciI | CCSGG | 6 cut(s) | 202, 330, 394, 395, 677, 748 |
| NdeII | GATC | 5 cut(s) | 13, 580, 1218, 1230, 1578 |
| NgoMIV | GCCGGC | 3 cut(s) | 143, 628, 966 |
| NlaIII | CATG | 4 cut(s) | 282, 1336, 1348, 1686 |
| NlaIV | GGNNCC | 9 cut(s) | 148, 192, 334, 384, 612, 752, 773, 1184, 1220 |
| NmeAIII | GCCGAG | 2 cut(s) | 175, 367 |
| NmuCI | GTSAC | 1 cut(s) | 1643 |
| PaeR7I | CTCGAG | 2 cut(s) | 422, 1409 |
| PagI | TCATGA | 1 cut(s) | 1332 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 147, 1098, 1304 |
| PdiI | GCCGGC | 3 cut(s) | 145, 630, 968 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1521 |
| PfeI | GAWTC | 5 cut(s) | 197, 373, 463, 783, 1436 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1034 |
| PfoI | TCCNGGA | 2 cut(s) | 200, 590 |
| PinAI | ACCGGT | 1 cut(s) | 604 |
| PleI | GAGTC | 4 cut(s) | 178, 453, 603, 1582 |
| PluTI | GGCGCC | 2 cut(s) | 150, 336 |
| PpsI | GAGTC | 4 cut(s) | 178, 453, 603, 1582 |
| PpuMI | RGGWCCY | 2 cut(s) | 190, 382 |
| PsiI | TTATAA | 1 cut(s) | 21 |
| Psp124BI | GAGCTC | 1 cut(s) | 423 |
| Psp5II | RGGWCCY | 2 cut(s) | 190, 382 |
| Psp6I | CCWGG | 2 cut(s) | 590, 912 |
| PspFI | CCCAGC | 1 cut(s) | 1656 |
| PspGI | CCWGG | 2 cut(s) | 590, 912 |
| PspN4I | GGNNCC | 9 cut(s) | 148, 192, 334, 384, 612, 752, 773, 1184, 1220 |
| PspPI | GGNCC | 9 cut(s) | 190, 382, 541, 610, 809, 828, 1183, 1659, 1691 |
| PspPPI | RGGWCCY | 2 cut(s) | 190, 382 |
| PspXI | VCTCGAGB | 1 cut(s) | 1409 |
| PstI | CTGCAG | 2 cut(s) | 708, 728 |
| PsuI | RGATCY | 2 cut(s) | 580, 1218 |
| RsaI | GTAC | 5 cut(s) | 183, 434, 1258, 1370, 1500 |
| RsaNI | GTAC | 5 cut(s) | 182, 433, 1257, 1369, 1499 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1331, 1347 |
| SacI | GAGCTC | 1 cut(s) | 423 |
| SaqAI | TTAA | 2 cut(s) | 1112, 1206 |
| Sau3AI | GATC | 5 cut(s) | 13, 580, 1218, 1230, 1578 |
| Sau96I | GGNCC | 9 cut(s) | 190, 382, 541, 610, 809, 828, 1183, 1659, 1691 |
| SchI | GAGTC | 4 cut(s) | 179, 454, 604, 1582 |
| ScrFI | CCNGG | 8 cut(s) | 202, 330, 394, 395, 592, 677, 748, 914 |
| SduI | GDGCHC | 1 cut(s) | 423 |
| SfaNI | GCATC | 4 cut(s) | 121, 886, 930, 1210 |
| SfcI | CTRYAG | 4 cut(s) | 704, 724, 1054, 1072 |
| SfoI | GGCGCC | 2 cut(s) | 148, 334 |
| Sfr274I | CTCGAG | 2 cut(s) | 422, 1409 |
| SgrAI | CRCCGGYG | 1 cut(s) | 143 |
| SinI | GGWCC | 4 cut(s) | 190, 382, 541, 1183 |
| SlaI | CTCGAG | 2 cut(s) | 422, 1409 |
| SmaI | CCCGGG | 1 cut(s) | 395 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1331, 1347 |
| SmlI | CTYRAG | 6 cut(s) | 164, 185, 377, 422, 1205, 1409 |
| SmoI | CTYRAG | 6 cut(s) | 164, 185, 377, 422, 1205, 1409 |
| Sse9I | AATT | 7 cut(s) | 208, 507, 1079, 1510, 1544, 1608, 1695 |
| SsiI | CCGC | 6 cut(s) | 302, 539, 567, 964, 1477, 1605 |
| SspDI | GGCGCC | 2 cut(s) | 146, 332 |
| SspMI | CTAG | 3 cut(s) | 416, 780, 1151 |
| SstI | GAGCTC | 1 cut(s) | 423 |
| StyD4I | CCNGG | 8 cut(s) | 200, 328, 392, 393, 590, 675, 746, 912 |
| StyI | CCWWGG | 1 cut(s) | 96 |
| TaaI | ACNGT | 4 cut(s) | 529, 1058, 1076, 1600 |
| TaiI | ACGT | 5 cut(s) | 869, 895, 935, 1254, 1431 |
| TaqI | TCGA | 5 cut(s) | 405, 423, 576, 1410, 1581 |
| TasI | AATT | 7 cut(s) | 208, 507, 1079, 1510, 1544, 1608, 1695 |
| TatI | WGTACW | 2 cut(s) | 1256, 1498 |
| TauI | GCSGC | 2 cut(s) | 305, 569 |
| TfiI | GAWTC | 5 cut(s) | 197, 373, 463, 783, 1436 |
| Tru1I | TTAA | 2 cut(s) | 1112, 1206 |
| Tru9I | TTAA | 2 cut(s) | 1112, 1206 |
| TscAI | CASTG | 1 cut(s) | 1570 |
| TseFI | GTSAC | 1 cut(s) | 1643 |
| Tsp45I | GTSAC | 1 cut(s) | 1643 |
| TspDTI | ATGAA | 8 cut(s) | 63, 247, 267, 351, 453, 1326, 1361, 1627 |
| TspGWI | ACGGA | 2 cut(s) | 1175, 1421 |
| TspMI | CCCGGG | 1 cut(s) | 393 |
| TspRI | CASTG | 1 cut(s) | 1570 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1034 |
| Vha464I | CTTAAG | 1 cut(s) | 1205 |
| VpaK11BI | GGWCC | 4 cut(s) | 190, 382, 541, 1183 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1376 |
| XapI | RAATTY | 4 cut(s) | 208, 507, 1079, 1544 |
| XbaI | TCTAGA | 1 cut(s) | 415 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1031, 1395 |
| XhoI | CTCGAG | 2 cut(s) | 422, 1409 |
| XmaI | CCCGGG | 1 cut(s) | 393 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1521 |
| XspI | CTAG | 3 cut(s) | 416, 780, 1151 |
| ZraI | GACGTC | 1 cut(s) | 867 |