No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 96 |
| Acc36I | ACCTGC | 1 cut(s) | 96 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 772 |
| AciI | CCGC | 2 cut(s) | 406, 861 |
| AclWI | GGATC | 2 cut(s) | 68, 596 |
| AcoI | YGGCCR | 1 cut(s) | 706 |
| AcsI | RAATTY | 2 cut(s) | 473, 496 |
| AdeI | CACNNNGTG | 1 cut(s) | 901 |
| AfaI | GTAC | 1 cut(s) | 293 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 772 |
| AgsI | TTSAA | 2 cut(s) | 421, 757 |
| AjiI | CACGTC | 2 cut(s) | 16, 33 |
| AjnI | CCWGG | 1 cut(s) | 174 |
| AluBI | AGCT | 7 cut(s) | 200, 206, 607, 617, 738, 842, 893 |
| AluI | AGCT | 7 cut(s) | 200, 206, 607, 617, 738, 842, 893 |
| Alw21I | GWGCWC | 2 cut(s) | 609, 844 |
| Alw26I | GTCTC | 2 cut(s) | 337, 541 |
| AlwI | GGATC | 2 cut(s) | 68, 596 |
| Ama87I | CYCGRG | 1 cut(s) | 164 |
| AoxI | GGCC | 2 cut(s) | 138, 706 |
| ApeKI | GCWGC | 1 cut(s) | 581 |
| ApoI | RAATTY | 2 cut(s) | 473, 496 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 450 |
| AsuHPI | GGTGA | 1 cut(s) | 715 |
| AvaI | CYCGRG | 1 cut(s) | 164 |
| BaeGI | GKGCMC | 3 cut(s) | 658, 765, 829 |
| BalI | TGGCCA | 1 cut(s) | 708 |
| BanII | GRGCYC | 2 cut(s) | 609, 844 |
| BauI | CACGAG | 1 cut(s) | 843 |
| BbsI | GAAGAC | 3 cut(s) | 31, 318, 521 |
| Bbv12I | GWGCWC | 2 cut(s) | 609, 844 |
| BbvI | GCAGC | 1 cut(s) | 593 |
| BccI | CCATC | 4 cut(s) | 137, 260, 387, 541 |
| BciT130I | CCWGG | 1 cut(s) | 176 |
| BclI | TGATCA | 1 cut(s) | 817 |
| BcoDI | GTCTC | 2 cut(s) | 337, 541 |
| BfaI | CTAG | 4 cut(s) | 152, 171, 383, 929 |
| BfmI | CTRYAG | 1 cut(s) | 579 |
| BfuAI | ACCTGC | 1 cut(s) | 96 |
| BisI | GCNGC | 1 cut(s) | 582 |
| BlsI | GCNGC | 1 cut(s) | 583 |
| Bme1390I | CCNGG | 1 cut(s) | 176 |
| BmeT110I | CYCGRG | 1 cut(s) | 164 |
| BmgBI | CACGTC | 2 cut(s) | 16, 33 |
| BmiI | GGNNCC | 1 cut(s) | 662 |
| BmrFI | CCNGG | 1 cut(s) | 176 |
| BmsI | GCATC | 4 cut(s) | 30, 139, 465, 729 |
| BpiI | GAAGAC | 3 cut(s) | 31, 318, 521 |
| BpmI | CTGGAG | 2 cut(s) | 272, 301 |
| BpuEI | CTTGAG | 2 cut(s) | 119, 186 |
| BsaI | GGTCTC | 1 cut(s) | 337 |
| BsaJI | CCNNGG | 1 cut(s) | 649 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 772 |
| Bse1I | ACTGG | 2 cut(s) | 94, 289 |
| Bse3DI | GCAATG | 1 cut(s) | 361 |
| BseBI | CCWGG | 1 cut(s) | 176 |
| BseDI | CCNNGG | 1 cut(s) | 649 |
| BseGI | GGATG | 2 cut(s) | 255, 645 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 772 |
| BseMI | GCAATG | 1 cut(s) | 361 |
| BseMII | CTCAG | 1 cut(s) | 456 |
| BseNI | ACTGG | 2 cut(s) | 94, 289 |
| BseSI | GKGCMC | 3 cut(s) | 658, 765, 829 |
| BseXI | GCAGC | 1 cut(s) | 593 |
| BshFI | GGCC | 2 cut(s) | 140, 708 |
| BsiHKAI | GWGCWC | 2 cut(s) | 609, 844 |
| BsiHKCI | CYCGRG | 1 cut(s) | 164 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 772 |
| BsmAI | GTCTC | 2 cut(s) | 337, 541 |
| BsmBI | CGTCTC | 1 cut(s) | 541 |
| BsnI | GGCC | 2 cut(s) | 140, 708 |
| Bso31I | GGTCTC | 1 cut(s) | 337 |
| BsoBI | CYCGRG | 1 cut(s) | 164 |
| Bsp1286I | GDGCHC | 5 cut(s) | 609, 658, 765, 829, 844 |
| Bsp143I | GATC | 7 cut(s) | 73, 280, 379, 588, 817, 913, 925 |
| BspACI | CCGC | 2 cut(s) | 406, 861 |
| BspANI | GGCC | 2 cut(s) | 140, 708 |
| BspCNI | CTCAG | 1 cut(s) | 455 |
| BspHI | TCATGA | 1 cut(s) | 601 |
| BspLI | GGNNCC | 1 cut(s) | 662 |
| BspMAI | CTGCAG | 1 cut(s) | 583 |
| BspMI | ACCTGC | 1 cut(s) | 96 |
| BspPI | GGATC | 2 cut(s) | 68, 596 |
| BspTNI | GGTCTC | 1 cut(s) | 337 |
| BsrDI | GCAATG | 1 cut(s) | 361 |
| BsrI | ACTGG | 2 cut(s) | 94, 289 |
| BssECI | CCNNGG | 1 cut(s) | 649 |
| BssMI | GATC | 7 cut(s) | 73, 280, 379, 588, 817, 913, 925 |
| BssSI | CACGAG | 1 cut(s) | 843 |
| BssT1I | CCWWGG | 1 cut(s) | 649 |
| Bst2BI | CACGAG | 1 cut(s) | 843 |
| Bst2UI | CCWGG | 1 cut(s) | 176 |
| Bst4CI | ACNGT | 2 cut(s) | 190, 752 |
| Bst6I | CTCTTC | 1 cut(s) | 661 |
| BstC8I | GCNNGC | 3 cut(s) | 128, 198, 226 |
| BstDEI | CTNAG | 3 cut(s) | 442, 555, 732 |
| BstF5I | GGATG | 2 cut(s) | 255, 645 |
| BstKTI | GATC | 7 cut(s) | 76, 283, 382, 591, 820, 916, 928 |
| BstMAI | GTCTC | 2 cut(s) | 337, 541 |
| BstMBI | GATC | 7 cut(s) | 73, 280, 379, 588, 817, 913, 925 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 18, 212, 221, 242, 869, 890 |
| BstNI | CCWGG | 1 cut(s) | 176 |
| BstSCI | CCNGG | 1 cut(s) | 174 |
| BstSFI | CTRYAG | 1 cut(s) | 579 |
| BstSLI | GKGCMC | 3 cut(s) | 658, 765, 829 |
| BstV1I | GCAGC | 1 cut(s) | 593 |
| BstV2I | GAAGAC | 3 cut(s) | 31, 318, 521 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 716 |
| BsuRI | GGCC | 2 cut(s) | 140, 708 |
| BtrI | CACGTC | 2 cut(s) | 16, 33 |
| BtsCI | GGATG | 2 cut(s) | 255, 645 |
| BtsI | GCAGTG | 1 cut(s) | 7 |
| BtsIMutI | CAGTG | 2 cut(s) | 7, 31 |
| BveI | ACCTGC | 1 cut(s) | 96 |
| Cac8I | GCNNGC | 3 cut(s) | 128, 198, 226 |
| CciI | TCATGA | 1 cut(s) | 601 |
| Csp6I | GTAC | 1 cut(s) | 292 |
| CviAII | CATG | 3 cut(s) | 602, 638, 710 |
| CviQI | GTAC | 1 cut(s) | 292 |
| DdeI | CTNAG | 3 cut(s) | 442, 555, 732 |
| DpnI | GATC | 7 cut(s) | 75, 282, 381, 590, 819, 915, 927 |
| DpnII | GATC | 7 cut(s) | 73, 280, 379, 588, 817, 913, 925 |
| DraIII | CACNNNGTG | 1 cut(s) | 901 |
| EaeI | YGGCCR | 1 cut(s) | 706 |
| Eam1104I | CTCTTC | 1 cut(s) | 661 |
| EarI | CTCTTC | 1 cut(s) | 661 |
| Ecl136II | GAGCTC | 2 cut(s) | 607, 842 |
| Eco130I | CCWWGG | 1 cut(s) | 649 |
| Eco24I | GRGCYC | 2 cut(s) | 609, 844 |
| Eco31I | GGTCTC | 1 cut(s) | 337 |
| Eco32I | GATATC | 2 cut(s) | 101, 121 |
| Eco53kI | GAGCTC | 2 cut(s) | 607, 842 |
| Eco88I | CYCGRG | 1 cut(s) | 164 |
| EcoICRI | GAGCTC | 2 cut(s) | 607, 842 |
| EcoRII | CCWGG | 1 cut(s) | 174 |
| EcoRV | GATATC | 2 cut(s) | 101, 121 |
| EcoT14I | CCWWGG | 1 cut(s) | 649 |
| EcoT38I | GRGCYC | 2 cut(s) | 609, 844 |
| ErhI | CCWWGG | 1 cut(s) | 649 |
| Esp3I | CGTCTC | 1 cut(s) | 541 |
| FaeI | CATG | 3 cut(s) | 605, 641, 713 |
| FatI | CATG | 3 cut(s) | 601, 637, 709 |
| FbaI | TGATCA | 1 cut(s) | 817 |
| Fnu4HI | GCNGC | 1 cut(s) | 582 |
| FokI | GGATG | 2 cut(s) | 242, 632 |
| FriOI | GRGCYC | 2 cut(s) | 609, 844 |
| Fsp4HI | GCNGC | 1 cut(s) | 582 |
| FspBI | CTAG | 4 cut(s) | 152, 171, 383, 929 |
| GluI | GCNGC | 1 cut(s) | 582 |
| GsuI | CTGGAG | 2 cut(s) | 272, 301 |
| HaeIII | GGCC | 2 cut(s) | 140, 708 |
| Hin1II | CATG | 3 cut(s) | 605, 641, 713 |
| HincII | GTYRAC | 1 cut(s) | 674 |
| HindII | GTYRAC | 1 cut(s) | 674 |
| HindIII | AAGCTT | 1 cut(s) | 204 |
| HinfI | GANTC | 7 cut(s) | 112, 147, 160, 265, 314, 365, 517 |
| HphI | GGTGA | 1 cut(s) | 715 |
| Hpy166II | GTNNAC | 1 cut(s) | 674 |
| Hpy188I | TCNGA | 2 cut(s) | 445, 817 |
| Hpy8I | GTNNAC | 1 cut(s) | 674 |
| HpyAV | CCTTC | 1 cut(s) | 315 |
| HpyCH4III | ACNGT | 2 cut(s) | 190, 752 |
| HpyCH4IV | ACGT | 3 cut(s) | 15, 32, 676 |
| HpyCH4V | TGCA | 2 cut(s) | 542, 581 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 18, 212, 221, 242, 869, 890 |
| HpyF3I | CTNAG | 3 cut(s) | 442, 555, 732 |
| HpySE526I | ACGT | 3 cut(s) | 15, 32, 676 |
| Hsp92II | CATG | 3 cut(s) | 605, 641, 713 |
| Ksp22I | TGATCA | 1 cut(s) | 817 |
| Kzo9I | GATC | 7 cut(s) | 73, 280, 379, 588, 817, 913, 925 |
| LmnI | GCTCC | 1 cut(s) | 291 |
| Lsp1109I | GCAGC | 1 cut(s) | 593 |
| LweI | GCATC | 4 cut(s) | 30, 139, 465, 729 |
| MaeI | CTAG | 4 cut(s) | 152, 171, 383, 929 |
| MaeII | ACGT | 3 cut(s) | 15, 32, 676 |
| MaeIII | GTNAC | 3 cut(s) | 50, 362, 574 |
| MalI | GATC | 7 cut(s) | 75, 282, 381, 590, 819, 915, 927 |
| MboI | GATC | 7 cut(s) | 73, 280, 379, 588, 817, 913, 925 |
| MboII | GAAGA | 8 cut(s) | 31, 320, 323, 526, 678, 860, 923, 932 |
| MhlI | GDGCHC | 5 cut(s) | 609, 658, 765, 829, 844 |
| MlsI | TGGCCA | 1 cut(s) | 708 |
| MluCI | AATT | 5 cut(s) | 62, 473, 496, 567, 852 |
| MluNI | TGGCCA | 1 cut(s) | 708 |
| MlyI | GAGTC | 4 cut(s) | 259, 308, 359, 511 |
| MnlI | CCTC | 7 cut(s) | 226, 413, 542, 662, 682, 686, 712 |
| Mox20I | TGGCCA | 1 cut(s) | 708 |
| MroXI | GAANNNNTTC | 1 cut(s) | 450 |
| MscI | TGGCCA | 1 cut(s) | 708 |
| MseI | TTAA | 1 cut(s) | 467 |
| MslI | CAYNNNNRTG | 2 cut(s) | 260, 714 |
| Msp20I | TGGCCA | 1 cut(s) | 708 |
| MspR9I | CCNGG | 1 cut(s) | 176 |
| MvaI | CCWGG | 1 cut(s) | 176 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 18, 212, 221, 242, 869, 890 |
| NdeII | GATC | 7 cut(s) | 73, 280, 379, 588, 817, 913, 925 |
| NlaIII | CATG | 3 cut(s) | 605, 641, 713 |
| NlaIV | GGNNCC | 1 cut(s) | 662 |
| NmuCI | GTSAC | 1 cut(s) | 362 |
| PaeR7I | CTCGAG | 1 cut(s) | 164 |
| PagI | TCATGA | 1 cut(s) | 601 |
| PaqCI | CACCTGC | 1 cut(s) | 96 |
| PdmI | GAANNNNTTC | 1 cut(s) | 450 |
| PfeI | GAWTC | 3 cut(s) | 112, 147, 160 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 772 |
| PkrI | GCNGC | 1 cut(s) | 583 |
| PleI | GAGTC | 4 cut(s) | 259, 308, 359, 511 |
| PpsI | GAGTC | 4 cut(s) | 259, 308, 359, 511 |
| Psp124BI | GAGCTC | 2 cut(s) | 609, 844 |
| Psp6I | CCWGG | 1 cut(s) | 174 |
| PspGI | CCWGG | 1 cut(s) | 174 |
| PspN4I | GGNNCC | 1 cut(s) | 662 |
| PstI | CTGCAG | 1 cut(s) | 583 |
| RsaI | GTAC | 1 cut(s) | 293 |
| RsaNI | GTAC | 1 cut(s) | 292 |
| RseI | CAYNNNNRTG | 2 cut(s) | 260, 714 |
| SacI | GAGCTC | 2 cut(s) | 609, 844 |
| SaqAI | TTAA | 1 cut(s) | 467 |
| SatI | GCNGC | 1 cut(s) | 582 |
| Sau3AI | GATC | 7 cut(s) | 73, 280, 379, 588, 817, 913, 925 |
| SchI | GAGTC | 4 cut(s) | 259, 308, 359, 511 |
| ScrFI | CCNGG | 1 cut(s) | 176 |
| SduI | GDGCHC | 5 cut(s) | 609, 658, 765, 829, 844 |
| SfaNI | GCATC | 4 cut(s) | 30, 139, 465, 729 |
| SfcI | CTRYAG | 1 cut(s) | 579 |
| Sfr274I | CTCGAG | 1 cut(s) | 164 |
| SlaI | CTCGAG | 1 cut(s) | 164 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 260, 714 |
| SmlI | CTYRAG | 3 cut(s) | 134, 164, 201 |
| SmoI | CTYRAG | 3 cut(s) | 134, 164, 201 |
| Sse9I | AATT | 5 cut(s) | 62, 473, 496, 567, 852 |
| SsiI | CCGC | 2 cut(s) | 406, 861 |
| SspMI | CTAG | 4 cut(s) | 152, 171, 383, 929 |
| SstI | GAGCTC | 2 cut(s) | 609, 844 |
| StyD4I | CCNGG | 1 cut(s) | 174 |
| StyI | CCWWGG | 1 cut(s) | 649 |
| TaaI | ACNGT | 2 cut(s) | 190, 752 |
| TaiI | ACGT | 3 cut(s) | 18, 35, 679 |
| TaqI | TCGA | 4 cut(s) | 165, 339, 500, 802 |
| TasI | AATT | 5 cut(s) | 62, 473, 496, 567, 852 |
| TfiI | GAWTC | 3 cut(s) | 112, 147, 160 |
| Tru1I | TTAA | 1 cut(s) | 467 |
| Tru9I | TTAA | 1 cut(s) | 467 |
| TscAI | CASTG | 2 cut(s) | 14, 31 |
| TseFI | GTSAC | 1 cut(s) | 362 |
| TseI | GCWGC | 1 cut(s) | 581 |
| Tsp45I | GTSAC | 1 cut(s) | 362 |
| TspDTI | ATGAA | 7 cut(s) | 290, 317, 321, 357, 485, 590, 635 |
| TspGWI | ACGGA | 3 cut(s) | 350, 601, 673 |
| TspRI | CASTG | 2 cut(s) | 14, 31 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 772 |
| XapI | RAATTY | 2 cut(s) | 473, 496 |
| XbaI | TCTAGA | 2 cut(s) | 382, 928 |
| XhoI | CTCGAG | 1 cut(s) | 164 |
| XmnI | GAANNNNTTC | 1 cut(s) | 450 |
| XspI | CTAG | 4 cut(s) | 152, 171, 383, 929 |