gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 97, 109, 110 |
| AfaI | GTAC | 1 cut(s) | 112 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 64 |
| AflII | CTTAAG | 1 cut(s) | 89 |
| AluBI | AGCT | 2 cut(s) | 24, 138 |
| AluI | AGCT | 2 cut(s) | 24, 138 |
| Alw26I | GTCTC | 1 cut(s) | 32 |
| AlwI | GGATC | 3 cut(s) | 97, 109, 110 |
| AspLEI | GCGC | 2 cut(s) | 50, 81 |
| AspS9I | GGNCC | 1 cut(s) | 67 |
| AvaII | GGWCC | 1 cut(s) | 67 |
| BamHI | GGATCC | 1 cut(s) | 102 |
| BccI | CCATC | 1 cut(s) | 92 |
| BciVI | GTATCC | 1 cut(s) | 47 |
| BcoDI | GTCTC | 1 cut(s) | 32 |
| BfrI | CTTAAG | 1 cut(s) | 89 |
| BfuI | GTATCC | 1 cut(s) | 47 |
| Bme18I | GGWCC | 1 cut(s) | 67 |
| BmgT120I | GGNCC | 1 cut(s) | 67 |
| BmiI | GGNNCC | 2 cut(s) | 68, 104 |
| BmsI | GCATC | 1 cut(s) | 94 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 13, 45 |
| BpuEI | CTTGAG | 1 cut(s) | 56 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 64 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 64 |
| BseMII | CTCAG | 1 cut(s) | 98 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 64 |
| BsmAI | GTCTC | 1 cut(s) | 32 |
| Bsp143I | GATC | 2 cut(s) | 102, 114 |
| BspCNI | CTCAG | 1 cut(s) | 99 |
| BspLI | GGNNCC | 2 cut(s) | 68, 104 |
| BspPI | GGATC | 3 cut(s) | 97, 109, 110 |
| BspTI | CTTAAG | 1 cut(s) | 89 |
| BssMI | GATC | 2 cut(s) | 102, 114 |
| BstAFI | CTTAAG | 1 cut(s) | 89 |
| BstC8I | GCNNGC | 1 cut(s) | 83 |
| BstDEI | CTNAG | 1 cut(s) | 107 |
| BstHHI | GCGC | 2 cut(s) | 50, 81 |
| BstKTI | GATC | 2 cut(s) | 105, 117 |
| BstMAI | GTCTC | 1 cut(s) | 32 |
| BstMBI | GATC | 2 cut(s) | 102, 114 |
| BstX2I | RGATCY | 1 cut(s) | 102 |
| BstYI | RGATCY | 1 cut(s) | 102 |
| BsuI | GTATCC | 1 cut(s) | 47 |
| Cac8I | GCNNGC | 1 cut(s) | 83 |
| CfoI | GCGC | 2 cut(s) | 50, 81 |
| Cfr13I | GGNCC | 1 cut(s) | 67 |
| Csp6I | GTAC | 1 cut(s) | 111 |
| CviJI | RGCY | 5 cut(s) | 24, 95, 124, 138, 150 |
| CviKI_1 | RGCY | 5 cut(s) | 24, 95, 124, 138, 150 |
| CviQI | GTAC | 1 cut(s) | 111 |
| DdeI | CTNAG | 1 cut(s) | 107 |
| DpnI | GATC | 2 cut(s) | 104, 116 |
| DpnII | GATC | 2 cut(s) | 102, 114 |
| Eco47I | GGWCC | 1 cut(s) | 67 |
| FaiI | YATR | 1 cut(s) | 60 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 8, 40 |
| GlaI | GCGC | 2 cut(s) | 49, 80 |
| HhaI | GCGC | 2 cut(s) | 50, 81 |
| Hin6I | GCGC | 2 cut(s) | 48, 79 |
| HinP1I | GCGC | 2 cut(s) | 48, 79 |
| Hpy188III | TCNNGA | 2 cut(s) | 106, 131 |
| HpyF3I | CTNAG | 1 cut(s) | 107 |
| HspAI | GCGC | 2 cut(s) | 48, 79 |
| Kzo9I | GATC | 2 cut(s) | 102, 114 |
| LpnPI | CCDG | 6 cut(s) | 23, 30, 36, 95, 116, 119 |
| LweI | GCATC | 1 cut(s) | 94 |
| MaeIII | GTNAC | 1 cut(s) | 5 |
| MalI | GATC | 2 cut(s) | 104, 116 |
| MboI | GATC | 2 cut(s) | 102, 114 |
| MflI | RGATCY | 1 cut(s) | 102 |
| MnlI | CCTC | 1 cut(s) | 140 |
| MseI | TTAA | 1 cut(s) | 90 |
| MspCI | CTTAAG | 1 cut(s) | 89 |
| NdeII | GATC | 2 cut(s) | 102, 114 |
| NlaIV | GGNNCC | 2 cut(s) | 68, 104 |
| PspN4I | GGNNCC | 2 cut(s) | 68, 104 |
| PspPI | GGNCC | 1 cut(s) | 67 |
| PsuI | RGATCY | 1 cut(s) | 102 |
| RsaI | GTAC | 1 cut(s) | 112 |
| RsaNI | GTAC | 1 cut(s) | 111 |
| SaqAI | TTAA | 1 cut(s) | 90 |
| Sau3AI | GATC | 2 cut(s) | 102, 114 |
| Sau96I | GGNCC | 1 cut(s) | 67 |
| SetI | ASST | 3 cut(s) | 12, 26, 140 |
| SfaNI | GCATC | 1 cut(s) | 94 |
| SinI | GGWCC | 1 cut(s) | 67 |
| SmlI | CTYRAG | 2 cut(s) | 35, 89 |
| SmoI | CTYRAG | 2 cut(s) | 35, 89 |
| Tru1I | TTAA | 1 cut(s) | 90 |
| Tru9I | TTAA | 1 cut(s) | 90 |
| TspGWI | ACGGA | 1 cut(s) | 59 |
| Vha464I | CTTAAG | 1 cut(s) | 89 |
| VpaK11BI | GGWCC | 1 cut(s) | 67 |