zinc finger
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 319 |
| AciI | CCGC | 2 cut(s) | 16, 133 |
| AclWI | GGATC | 2 cut(s) | 56, 424 |
| AcoI | YGGCCR | 1 cut(s) | 502 |
| AfaI | GTAC | 2 cut(s) | 47, 335 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 112 |
| AgsI | TTSAA | 3 cut(s) | 59, 161, 169 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 169 |
| AjiI | CACGTC | 1 cut(s) | 500 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 452, 484 |
| AluBI | AGCT | 5 cut(s) | 71, 223, 343, 365, 382 |
| AluI | AGCT | 5 cut(s) | 71, 223, 343, 365, 382 |
| Alw21I | GWGCWC | 3 cut(s) | 297, 357, 384 |
| AlwI | GGATC | 2 cut(s) | 56, 424 |
| AoxI | GGCC | 2 cut(s) | 129, 502 |
| ApaI | GGGCCC | 1 cut(s) | 133 |
| ApeKI | GCWGC | 3 cut(s) | 301, 304, 443 |
| AspLEI | GCGC | 1 cut(s) | 319 |
| AspS9I | GGNCC | 2 cut(s) | 129, 130 |
| AsuHPI | GGTGA | 4 cut(s) | 95, 127, 262, 491 |
| BaeGI | GKGCMC | 1 cut(s) | 133 |
| BalI | TGGCCA | 1 cut(s) | 504 |
| BanII | GRGCYC | 2 cut(s) | 133, 384 |
| Bbv12I | GWGCWC | 3 cut(s) | 297, 357, 384 |
| BbvI | GCAGC | 3 cut(s) | 313, 316, 430 |
| BccI | CCATC | 2 cut(s) | 27, 405 |
| BfmI | CTRYAG | 1 cut(s) | 299 |
| BisI | GCNGC | 4 cut(s) | 16, 302, 305, 444 |
| BlsI | GCNGC | 4 cut(s) | 17, 303, 306, 445 |
| BmcAI | AGTACT | 1 cut(s) | 47 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 169 |
| BmgBI | CACGTC | 1 cut(s) | 500 |
| BmgT120I | GGNCC | 2 cut(s) | 129, 130 |
| BmiI | GGNNCC | 1 cut(s) | 131 |
| BpuEI | CTTGAG | 1 cut(s) | 106 |
| BsaJI | CCNNGG | 1 cut(s) | 125 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 112 |
| Bse1I | ACTGG | 1 cut(s) | 418 |
| BseDI | CCNNGG | 1 cut(s) | 125 |
| BseGI | GGATG | 1 cut(s) | 467 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 112 |
| BseMII | CTCAG | 4 cut(s) | 143, 227, 234, 321 |
| BseNI | ACTGG | 1 cut(s) | 418 |
| BseRI | GAGGAG | 1 cut(s) | 260 |
| BseSI | GKGCMC | 1 cut(s) | 133 |
| BseXI | GCAGC | 3 cut(s) | 313, 316, 430 |
| BsgI | GTGCAG | 1 cut(s) | 405 |
| Bsh1236I | CGCG | 1 cut(s) | 319 |
| BshFI | GGCC | 2 cut(s) | 131, 504 |
| BsiHKAI | GWGCWC | 3 cut(s) | 297, 357, 384 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 112 |
| BsmI | GAATGC | 2 cut(s) | 85, 445 |
| BsnI | GGCC | 2 cut(s) | 131, 504 |
| Bsp120I | GGGCCC | 1 cut(s) | 129 |
| Bsp1286I | GDGCHC | 4 cut(s) | 133, 297, 357, 384 |
| Bsp143I | GATC | 2 cut(s) | 61, 416 |
| BspACI | CCGC | 2 cut(s) | 16, 133 |
| BspANI | GGCC | 2 cut(s) | 131, 504 |
| BspCNI | CTCAG | 4 cut(s) | 144, 226, 235, 322 |
| BspFNI | CGCG | 1 cut(s) | 319 |
| BspLI | GGNNCC | 1 cut(s) | 131 |
| BspMAI | CTGCAG | 1 cut(s) | 303 |
| BspPI | GGATC | 2 cut(s) | 56, 424 |
| BsrI | ACTGG | 1 cut(s) | 418 |
| BssECI | CCNNGG | 1 cut(s) | 125 |
| BssMI | GATC | 2 cut(s) | 61, 416 |
| BssT1I | CCWWGG | 1 cut(s) | 125 |
| Bst4CI | ACNGT | 2 cut(s) | 55, 115 |
| BstC8I | GCNNGC | 1 cut(s) | 133 |
| BstDEI | CTNAG | 5 cut(s) | 152, 213, 243, 330, 358 |
| BstF5I | GGATG | 1 cut(s) | 467 |
| BstFNI | CGCG | 1 cut(s) | 319 |
| BstHHI | GCGC | 1 cut(s) | 319 |
| BstKTI | GATC | 2 cut(s) | 64, 419 |
| BstMBI | GATC | 2 cut(s) | 61, 416 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 301 |
| BstSFI | CTRYAG | 1 cut(s) | 299 |
| BstSLI | GKGCMC | 1 cut(s) | 133 |
| BstUI | CGCG | 1 cut(s) | 319 |
| BstV1I | GCAGC | 3 cut(s) | 313, 316, 430 |
| BstX2I | RGATCY | 2 cut(s) | 61, 416 |
| BstYI | RGATCY | 2 cut(s) | 61, 416 |
| BsuRI | GGCC | 2 cut(s) | 131, 504 |
| BtrI | CACGTC | 1 cut(s) | 500 |
| BtsCI | GGATG | 1 cut(s) | 467 |
| BtsIMutI | CAGTG | 2 cut(s) | 180, 327 |
| Cac8I | GCNNGC | 1 cut(s) | 133 |
| CfoI | GCGC | 1 cut(s) | 319 |
| Cfr13I | GGNCC | 2 cut(s) | 129, 130 |
| Csp6I | GTAC | 2 cut(s) | 46, 334 |
| CviAII | CATG | 1 cut(s) | 281 |
| CviJI | RGCY | 8 cut(s) | 71, 131, 223, 324, 343, 365, 382, 504 |
| CviKI_1 | RGCY | 8 cut(s) | 71, 131, 223, 324, 343, 365, 382, 504 |
| CviQI | GTAC | 2 cut(s) | 46, 334 |
| DdeI | CTNAG | 5 cut(s) | 152, 213, 243, 330, 358 |
| DpnI | GATC | 2 cut(s) | 63, 418 |
| DpnII | GATC | 2 cut(s) | 61, 416 |
| DriI | GACNNNNNGTC | 1 cut(s) | 169 |
| EaeI | YGGCCR | 1 cut(s) | 502 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 169 |
| Ecl136II | GAGCTC | 1 cut(s) | 382 |
| Eco130I | CCWWGG | 1 cut(s) | 125 |
| Eco24I | GRGCYC | 2 cut(s) | 133, 384 |
| Eco32I | GATATC | 1 cut(s) | 348 |
| Eco53kI | GAGCTC | 1 cut(s) | 382 |
| EcoICRI | GAGCTC | 1 cut(s) | 382 |
| EcoO109I | RGGNCCY | 1 cut(s) | 129 |
| EcoRV | GATATC | 1 cut(s) | 348 |
| EcoT14I | CCWWGG | 1 cut(s) | 125 |
| EcoT38I | GRGCYC | 2 cut(s) | 133, 384 |
| ErhI | CCWWGG | 1 cut(s) | 125 |
| FaeI | CATG | 1 cut(s) | 284 |
| FaiI | YATR | 6 cut(s) | 138, 252, 254, 282, 312, 489 |
| FatI | CATG | 1 cut(s) | 280 |
| FauI | CCCGC | 1 cut(s) | 140 |
| FauNDI | CATATG | 1 cut(s) | 252 |
| Fnu4HI | GCNGC | 4 cut(s) | 16, 302, 305, 444 |
| FokI | GGATG | 1 cut(s) | 454 |
| FriOI | GRGCYC | 2 cut(s) | 133, 384 |
| Fsp4HI | GCNGC | 4 cut(s) | 16, 302, 305, 444 |
| GlaI | GCGC | 1 cut(s) | 318 |
| GluI | GCNGC | 4 cut(s) | 16, 302, 305, 444 |
| HaeIII | GGCC | 2 cut(s) | 131, 504 |
| HhaI | GCGC | 1 cut(s) | 319 |
| Hin1II | CATG | 1 cut(s) | 284 |
| Hin6I | GCGC | 1 cut(s) | 317 |
| HinP1I | GCGC | 1 cut(s) | 317 |
| HinfI | GANTC | 3 cut(s) | 118, 145, 157 |
| HphI | GGTGA | 4 cut(s) | 95, 127, 262, 491 |
| Hpy166II | GTNNAC | 2 cut(s) | 144, 460 |
| Hpy188I | TCNGA | 3 cut(s) | 153, 203, 216 |
| Hpy188III | TCNNGA | 5 cut(s) | 23, 76, 161, 385, 405 |
| Hpy8I | GTNNAC | 2 cut(s) | 144, 460 |
| HpyCH4III | ACNGT | 2 cut(s) | 55, 115 |
| HpyCH4IV | ACGT | 2 cut(s) | 291, 499 |
| HpyCH4V | TGCA | 3 cut(s) | 194, 301, 422 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 301 |
| HpyF3I | CTNAG | 5 cut(s) | 152, 213, 243, 330, 358 |
| HpySE526I | ACGT | 2 cut(s) | 291, 499 |
| Hsp92II | CATG | 1 cut(s) | 284 |
| HspAI | GCGC | 1 cut(s) | 317 |
| Kzo9I | GATC | 2 cut(s) | 61, 416 |
| LmnI | GCTCC | 3 cut(s) | 247, 300, 387 |
| LpnPI | CCDG | 9 cut(s) | 61, 119, 242, 311, 353, 398, 399, 444, 459 |
| Lsp1109I | GCAGC | 3 cut(s) | 313, 316, 430 |
| MaeII | ACGT | 2 cut(s) | 291, 499 |
| MalI | GATC | 2 cut(s) | 63, 418 |
| MboI | GATC | 2 cut(s) | 61, 416 |
| MboII | GAAGA | 2 cut(s) | 71, 113 |
| MflI | RGATCY | 2 cut(s) | 61, 416 |
| MhlI | GDGCHC | 4 cut(s) | 133, 297, 357, 384 |
| MlsI | TGGCCA | 1 cut(s) | 504 |
| MluCI | AATT | 2 cut(s) | 187, 204 |
| MluNI | TGGCCA | 1 cut(s) | 504 |
| MlyI | GAGTC | 1 cut(s) | 139 |
| MmeI | TCCRAC | 1 cut(s) | 312 |
| Mox20I | TGGCCA | 1 cut(s) | 504 |
| MscI | TGGCCA | 1 cut(s) | 504 |
| MseI | TTAA | 1 cut(s) | 50 |
| MslI | CAYNNNNRTG | 1 cut(s) | 24 |
| Msp20I | TGGCCA | 1 cut(s) | 504 |
| MspA1I | CMGCKG | 1 cut(s) | 343 |
| Mva1269I | GAATGC | 2 cut(s) | 85, 445 |
| MvnI | CGCG | 1 cut(s) | 319 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 301 |
| NdeI | CATATG | 1 cut(s) | 252 |
| NdeII | GATC | 2 cut(s) | 61, 416 |
| NlaIII | CATG | 1 cut(s) | 284 |
| NlaIV | GGNNCC | 1 cut(s) | 131 |
| PctI | GAATGC | 2 cut(s) | 85, 445 |
| PfeI | GAWTC | 2 cut(s) | 118, 157 |
| PkrI | GCNGC | 4 cut(s) | 17, 303, 306, 445 |
| PleI | GAGTC | 1 cut(s) | 139 |
| PpsI | GAGTC | 1 cut(s) | 139 |
| Psp124BI | GAGCTC | 1 cut(s) | 384 |
| PspN4I | GGNNCC | 1 cut(s) | 131 |
| PspOMI | GGGCCC | 1 cut(s) | 129 |
| PspPI | GGNCC | 2 cut(s) | 129, 130 |
| PstI | CTGCAG | 1 cut(s) | 303 |
| PsuI | RGATCY | 2 cut(s) | 61, 416 |
| PvuII | CAGCTG | 1 cut(s) | 343 |
| RsaI | GTAC | 2 cut(s) | 47, 335 |
| RsaNI | GTAC | 2 cut(s) | 46, 334 |
| RseI | CAYNNNNRTG | 1 cut(s) | 24 |
| SacI | GAGCTC | 1 cut(s) | 384 |
| SaqAI | TTAA | 1 cut(s) | 50 |
| SatI | GCNGC | 4 cut(s) | 16, 302, 305, 444 |
| Sau3AI | GATC | 2 cut(s) | 61, 416 |
| Sau96I | GGNCC | 2 cut(s) | 129, 130 |
| ScaI | AGTACT | 1 cut(s) | 47 |
| SchI | GAGTC | 1 cut(s) | 139 |
| SduI | GDGCHC | 4 cut(s) | 133, 297, 357, 384 |
| SfcI | CTRYAG | 1 cut(s) | 299 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 24 |
| SmlI | CTYRAG | 1 cut(s) | 85 |
| SmoI | CTYRAG | 1 cut(s) | 85 |
| Sse9I | AATT | 2 cut(s) | 187, 204 |
| SsiI | CCGC | 2 cut(s) | 16, 133 |
| SstI | GAGCTC | 1 cut(s) | 384 |
| StyI | CCWWGG | 1 cut(s) | 125 |
| TaaI | ACNGT | 2 cut(s) | 55, 115 |
| TaiI | ACGT | 2 cut(s) | 294, 502 |
| TaqI | TCGA | 2 cut(s) | 453, 517 |
| TasI | AATT | 2 cut(s) | 187, 204 |
| TatI | WGTACW | 2 cut(s) | 45, 333 |
| TauI | GCSGC | 1 cut(s) | 18 |
| TfiI | GAWTC | 2 cut(s) | 118, 157 |
| Tru1I | TTAA | 1 cut(s) | 50 |
| Tru9I | TTAA | 1 cut(s) | 50 |
| TscAI | CASTG | 2 cut(s) | 180, 334 |
| TseI | GCWGC | 3 cut(s) | 301, 304, 443 |
| TspDTI | ATGAA | 3 cut(s) | 233, 269, 404 |
| TspGWI | ACGGA | 1 cut(s) | 54 |
| TspRI | CASTG | 2 cut(s) | 180, 334 |
| ZrmI | AGTACT | 1 cut(s) | 47 |