zinc finger
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 473 |
| AciI | CCGC | 1 cut(s) | 462 |
| AclWI | GGATC | 2 cut(s) | 161, 359 |
| AcoI | YGGCCR | 1 cut(s) | 139 |
| AfaI | GTAC | 1 cut(s) | 311 |
| AflIII | ACRYGT | 1 cut(s) | 439 |
| AhlI | ACTAGT | 1 cut(s) | 107 |
| AluBI | AGCT | 2 cut(s) | 237, 338 |
| AluI | AGCT | 2 cut(s) | 237, 338 |
| Alw21I | GWGCWC | 2 cut(s) | 115, 278 |
| Alw26I | GTCTC | 3 cut(s) | 21, 36, 118 |
| Alw44I | GTGCAC | 1 cut(s) | 274 |
| AlwI | GGATC | 2 cut(s) | 161, 359 |
| AoxI | GGCC | 1 cut(s) | 139 |
| ApaLI | GTGCAC | 1 cut(s) | 274 |
| AseI | ATTAAT | 1 cut(s) | 150 |
| AsuC2I | CCSGG | 1 cut(s) | 28 |
| AsuHPI | GGTGA | 1 cut(s) | 61 |
| AxyI | CCTNAGG | 1 cut(s) | 45 |
| BaeGI | GKGCMC | 1 cut(s) | 278 |
| BalI | TGGCCA | 1 cut(s) | 141 |
| BanI | GGYRCC | 1 cut(s) | 473 |
| Bbv12I | GWGCWC | 2 cut(s) | 115, 278 |
| BccI | CCATC | 1 cut(s) | 141 |
| BclI | TGATCA | 1 cut(s) | 453 |
| BcnI | CCSGG | 1 cut(s) | 28 |
| BcoDI | GTCTC | 3 cut(s) | 21, 36, 118 |
| BcuI | ACTAGT | 1 cut(s) | 107 |
| BfaI | CTAG | 2 cut(s) | 108, 246 |
| Bme1390I | CCNGG | 1 cut(s) | 28 |
| BmiI | GGNNCC | 1 cut(s) | 475 |
| BmrFI | CCNGG | 1 cut(s) | 28 |
| BpuMI | CCSGG | 1 cut(s) | 28 |
| Bsa29I | ATCGAT | 1 cut(s) | 354 |
| BsaI | GGTCTC | 1 cut(s) | 36 |
| BsaJI | CCNNGG | 2 cut(s) | 142, 368 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 302, 332 |
| Bse1I | ACTGG | 2 cut(s) | 13, 70 |
| Bse21I | CCTNAGG | 1 cut(s) | 45 |
| Bse3DI | GCAATG | 1 cut(s) | 265 |
| BseCI | ATCGAT | 1 cut(s) | 354 |
| BseDI | CCNNGG | 2 cut(s) | 142, 368 |
| BseMI | GCAATG | 1 cut(s) | 265 |
| BseMII | CTCAG | 2 cut(s) | 36, 372 |
| BseNI | ACTGG | 2 cut(s) | 13, 70 |
| BseSI | GKGCMC | 1 cut(s) | 278 |
| BsgI | GTGCAG | 1 cut(s) | 384 |
| BshFI | GGCC | 1 cut(s) | 141 |
| BshNI | GGYRCC | 1 cut(s) | 473 |
| BshVI | ATCGAT | 1 cut(s) | 354 |
| BsiHKAI | GWGCWC | 2 cut(s) | 115, 278 |
| BsiSI | CCGG | 1 cut(s) | 27 |
| BsmAI | GTCTC | 3 cut(s) | 21, 36, 118 |
| BsnI | GGCC | 1 cut(s) | 141 |
| Bso31I | GGTCTC | 1 cut(s) | 36 |
| Bsp1286I | GDGCHC | 2 cut(s) | 115, 278 |
| Bsp143I | GATC | 4 cut(s) | 166, 355, 364, 453 |
| Bsp19I | CCATGG | 1 cut(s) | 142 |
| BspACI | CCGC | 1 cut(s) | 462 |
| BspANI | GGCC | 1 cut(s) | 141 |
| BspCNI | CTCAG | 2 cut(s) | 37, 373 |
| BspDI | ATCGAT | 1 cut(s) | 354 |
| BspLI | GGNNCC | 1 cut(s) | 475 |
| BspPI | GGATC | 2 cut(s) | 161, 359 |
| BspT107I | GGYRCC | 1 cut(s) | 473 |
| BspTNI | GGTCTC | 1 cut(s) | 36 |
| BsrDI | GCAATG | 1 cut(s) | 265 |
| BsrI | ACTGG | 2 cut(s) | 13, 70 |
| BssECI | CCNNGG | 2 cut(s) | 142, 368 |
| BssMI | GATC | 4 cut(s) | 166, 355, 364, 453 |
| BssT1I | CCWWGG | 2 cut(s) | 142, 368 |
| Bst4CI | ACNGT | 2 cut(s) | 162, 309 |
| BstDEI | CTNAG | 3 cut(s) | 45, 222, 381 |
| BstDSI | CCRYGG | 1 cut(s) | 142 |
| BstKTI | GATC | 4 cut(s) | 169, 358, 367, 456 |
| BstMAI | GTCTC | 3 cut(s) | 21, 36, 118 |
| BstMBI | GATC | 4 cut(s) | 166, 355, 364, 453 |
| BstNSI | RCATGY | 2 cut(s) | 289, 443 |
| BstSCI | CCNGG | 1 cut(s) | 26 |
| BstSLI | GKGCMC | 1 cut(s) | 278 |
| BstX2I | RGATCY | 1 cut(s) | 364 |
| BstYI | RGATCY | 1 cut(s) | 364 |
| Bsu15I | ATCGAT | 1 cut(s) | 354 |
| Bsu36I | CCTNAGG | 1 cut(s) | 45 |
| BsuRI | GGCC | 1 cut(s) | 141 |
| BsuTUI | ATCGAT | 1 cut(s) | 354 |
| BtgI | CCRYGG | 1 cut(s) | 142 |
| BtsI | GCAGTG | 1 cut(s) | 396 |
| BtsIMutI | CAGTG | 3 cut(s) | 63, 305, 396 |
| ClaI | ATCGAT | 1 cut(s) | 354 |
| Csp6I | GTAC | 1 cut(s) | 310 |
| CviAII | CATG | 9 cut(s) | 74, 86, 98, 128, 137, 143, 286, 440, 451 |
| CviJI | RGCY | 6 cut(s) | 141, 218, 237, 317, 338, 385 |
| CviKI_1 | RGCY | 6 cut(s) | 141, 218, 237, 317, 338, 385 |
| CviQI | GTAC | 1 cut(s) | 310 |
| DdeI | CTNAG | 3 cut(s) | 45, 222, 381 |
| DpnI | GATC | 4 cut(s) | 168, 357, 366, 455 |
| DpnII | GATC | 4 cut(s) | 166, 355, 364, 453 |
| EaeI | YGGCCR | 1 cut(s) | 139 |
| Eco130I | CCWWGG | 2 cut(s) | 142, 368 |
| Eco31I | GGTCTC | 1 cut(s) | 36 |
| Eco81I | CCTNAGG | 1 cut(s) | 45 |
| EcoT14I | CCWWGG | 2 cut(s) | 142, 368 |
| ErhI | CCWWGG | 2 cut(s) | 142, 368 |
| FaeI | CATG | 9 cut(s) | 77, 89, 101, 131, 140, 146, 289, 443, 454 |
| FatI | CATG | 9 cut(s) | 73, 85, 97, 127, 136, 142, 285, 439, 450 |
| FbaI | TGATCA | 1 cut(s) | 453 |
| FspBI | CTAG | 2 cut(s) | 108, 246 |
| HaeIII | GGCC | 1 cut(s) | 141 |
| HapII | CCGG | 1 cut(s) | 27 |
| Hin1II | CATG | 9 cut(s) | 77, 89, 101, 131, 140, 146, 289, 443, 454 |
| HincII | GTYRAC | 1 cut(s) | 445 |
| HindII | GTYRAC | 1 cut(s) | 445 |
| HindIII | AAGCTT | 1 cut(s) | 235 |
| HinfI | GANTC | 1 cut(s) | 374 |
| HpaII | CCGG | 1 cut(s) | 27 |
| HphI | GGTGA | 1 cut(s) | 61 |
| Hpy166II | GTNNAC | 3 cut(s) | 276, 427, 445 |
| Hpy188I | TCNGA | 3 cut(s) | 364, 382, 415 |
| Hpy8I | GTNNAC | 3 cut(s) | 276, 427, 445 |
| HpyCH4III | ACNGT | 2 cut(s) | 162, 309 |
| HpyCH4V | TGCA | 3 cut(s) | 258, 276, 401 |
| HpyF3I | CTNAG | 3 cut(s) | 45, 222, 381 |
| Hsp92II | CATG | 9 cut(s) | 77, 89, 101, 131, 140, 146, 289, 443, 454 |
| Ksp22I | TGATCA | 1 cut(s) | 453 |
| Kzo9I | GATC | 4 cut(s) | 166, 355, 364, 453 |
| LpnPI | CCDG | 4 cut(s) | 26, 40, 51, 57 |
| MaeI | CTAG | 2 cut(s) | 108, 246 |
| MaeIII | GTNAC | 1 cut(s) | 301 |
| MalI | GATC | 4 cut(s) | 168, 357, 366, 455 |
| MboI | GATC | 4 cut(s) | 166, 355, 364, 453 |
| MflI | RGATCY | 1 cut(s) | 364 |
| MhlI | GDGCHC | 2 cut(s) | 115, 278 |
| MlsI | TGGCCA | 1 cut(s) | 141 |
| MluCI | AATT | 1 cut(s) | 147 |
| MluNI | TGGCCA | 1 cut(s) | 141 |
| MnlI | CCTC | 2 cut(s) | 40, 328 |
| Mox20I | TGGCCA | 1 cut(s) | 141 |
| MscI | TGGCCA | 1 cut(s) | 141 |
| MseI | TTAA | 3 cut(s) | 120, 150, 324 |
| MslI | CAYNNNNRTG | 1 cut(s) | 141 |
| Msp20I | TGGCCA | 1 cut(s) | 141 |
| MspI | CCGG | 1 cut(s) | 27 |
| MspR9I | CCNGG | 1 cut(s) | 28 |
| NciI | CCSGG | 1 cut(s) | 28 |
| NcoI | CCATGG | 1 cut(s) | 142 |
| NdeII | GATC | 4 cut(s) | 166, 355, 364, 453 |
| NlaIII | CATG | 9 cut(s) | 77, 89, 101, 131, 140, 146, 289, 443, 454 |
| NlaIV | GGNNCC | 1 cut(s) | 475 |
| NmuCI | GTSAC | 1 cut(s) | 301 |
| NspI | RCATGY | 2 cut(s) | 289, 443 |
| PciI | ACATGT | 1 cut(s) | 439 |
| PfeI | GAWTC | 1 cut(s) | 374 |
| PscI | ACATGT | 1 cut(s) | 439 |
| PshBI | ATTAAT | 1 cut(s) | 150 |
| PspN4I | GGNNCC | 1 cut(s) | 475 |
| PsuI | RGATCY | 1 cut(s) | 364 |
| RsaI | GTAC | 1 cut(s) | 311 |
| RsaNI | GTAC | 1 cut(s) | 310 |
| RseI | CAYNNNNRTG | 1 cut(s) | 141 |
| SaqAI | TTAA | 3 cut(s) | 120, 150, 324 |
| Sau3AI | GATC | 4 cut(s) | 166, 355, 364, 453 |
| ScrFI | CCNGG | 1 cut(s) | 28 |
| SduI | GDGCHC | 2 cut(s) | 115, 278 |
| SetI | ASST | 5 cut(s) | 40, 46, 51, 239, 340 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 141 |
| SpeI | ACTAGT | 1 cut(s) | 107 |
| Sse9I | AATT | 1 cut(s) | 147 |
| SsiI | CCGC | 1 cut(s) | 462 |
| SspMI | CTAG | 2 cut(s) | 108, 246 |
| StyD4I | CCNGG | 1 cut(s) | 26 |
| StyI | CCWWGG | 2 cut(s) | 142, 368 |
| TaaI | ACNGT | 2 cut(s) | 162, 309 |
| TaqI | TCGA | 2 cut(s) | 165, 354 |
| TasI | AATT | 1 cut(s) | 147 |
| TfiI | GAWTC | 1 cut(s) | 374 |
| Tru1I | TTAA | 3 cut(s) | 120, 150, 324 |
| Tru9I | TTAA | 3 cut(s) | 120, 150, 324 |
| TscAI | CASTG | 3 cut(s) | 70, 312, 403 |
| TseFI | GTSAC | 1 cut(s) | 301 |
| Tsp45I | GTSAC | 1 cut(s) | 301 |
| TspDTI | ATGAA | 5 cut(s) | 17, 114, 224, 246, 366 |
| TspRI | CASTG | 3 cut(s) | 70, 312, 403 |
| VneI | GTGCAC | 1 cut(s) | 274 |
| VspI | ATTAAT | 1 cut(s) | 150 |
| XceI | RCATGY | 2 cut(s) | 289, 443 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 140 |
| XspI | CTAG | 2 cut(s) | 108, 246 |